Search results for "Ability"

showing 10 items of 18559 documents

Oxidative stress in the oral cavity is driven by individualspecific bacterial communities

2018

The term “bacterial dysbiosis” is being used quite extensively in metagenomic studies, however, the identification of harmful bacteria often fails due to large overlap between the bacterial species found in healthy volunteers and patients. We hypothesized that the pathogenic oral bacteria are individual-specific and they correlate with oxidative stress markers in saliva which reflect the inflammatory processes in the oral cavity. Temporally direct and lagged correlations between the markers and bacterial taxa were computed individually for 26 volunteers who provided saliva samples during one month (21.2 ± 2.7 samples/volunteer, 551 samples in total). The volunteers’ microbiomes differed sig…

0301 basic medicineSalivaACID REACTING SUBSTANCES030106 microbiologyPhysiologyDiseasemedicine.disease_causeApplied Microbiology and BiotechnologyMicrobiologylcsh:Microbial ecologyArticle03 medical and health sciencesmedicineMicrobiomeGENE-EXPRESSIONTOTAL ANTIOXIDANT CAPACITYScience & TechnologyDENTAL-CARIESPLASMASTABILITYbiologybiology.organism_classificationmedicine.diseaseSALIVARY MARKERSSTREPTOCOCCUS-MUTANSStreptococcus mutansMICROBIOME030104 developmental biologyBiotechnology & Applied MicrobiologyMetagenomicslcsh:QR100-130Life Sciences & BiomedicineDysbiosisRESISTANCEBacteriaOxidative stressBiotechnology
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Modeling the heat inactivation of foodborne pathogens in milk powder : High relevance of the substrate water activity

2017

International audience; Due to the ability of foodborne pathogens to survive in low moisture foods, the decontamination of these products is an important issue in food hygiene. Up to now, such decontamination has mostly been achieved through empirical methods. The intention of this work is to establish a more rational use of heat treatment cycles. The effects of thermal treatment cycles on the inactivation of dried Salmonella Typhimurium, Salmonella Senftenberg, Cronobacter sakazakii and Escherichia coli were assessed. Bacteria were mixed with whole milk powder and dried down to different water activity levels (0.11, 0.25, 0.44 and 0.58). The rate of inactivated bacteria was determined afte…

0301 basic medicineSalmonellaHot TemperatureTime FactorsWater activityFood HandlingThermal resistance030106 microbiologymedicine.disease_causeFoodborne Diseases03 medical and health sciencesCronobacter sakazakiiGram-Negative Bacteria[SDV.IDA]Life Sciences [q-bio]/Food engineeringFood QualitymedicineEscherichia coliAnimalsSalmonella SenftenbergFood scienceEscherichia coliDecontamination2. Zero hungerMicrobial ViabilitybiologyMoisturePredictive microbiologyChemistry[ SDV.IDA ] Life Sciences [q-bio]/Food engineeringWaterHuman decontaminationModels Theoreticalbiology.organism_classificationLow water activity foodCronobacter sakazakii6. Clean waterMilk13. Climate actionSalmonella TyphimuriumFood MicrobiologyPowdersBacteriaFood Science
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Cellular Injuries in Cronobacter sakazakii CIP 103183T and Salmonella enterica Exposed to Drying and Subsequent Heat Treatment in Milk Powder

2018

International audience; Because of the ability of foodborne pathogens to survive in low-moisture foods, their decontamination is an important issue in food protection. This study aimed to clarify some of the cellular mechanisms involved in inactivation of foodborne pathogens after drying and subsequent heating. Individual strains of Salmonella Typhimurium, Salmonella Senftenberg, and Cronobacter sakazakii were mixed into whole milk powder and dried to different water activity levels (0.25 and 0.58); the number of surviving cells was determined after drying and subsequent thermal treatments in closed vessels at 90 and 100 degrees C, for 30 and 120 s. For each condition, the percentage of unc…

0301 basic medicineSalmonellalcsh:QR1-502medicine.disease_causelcsh:Microbiologyperméabilité membranairechemistry.chemical_compound[SDV.IDA]Life Sciences [q-bio]/Food engineeringFood sciencedryingOriginal Researchpropidium iodidebiologyChemistryMicrobiology and Parasitologyplasma-membraneSalmonella entericainfant formulaMicrobiologie et ParasitologieSalmonella entericaAlimentation et Nutritionsaccharomyces-cerevisiaeenterobacter-sakazakiitraitement thermiqueséchageMicrobiology (medical)Water activityMembrane permeabilitydesiccation tolerance030106 microbiologylow-water activityMicrobiologyrespiratory activity03 medical and health sciencesCronobacter sakazakiimedicineFood and NutritionPropidium iodideactivation respiratoireEscherichia colifoodborne pathogensheat treatmentbiology.organism_classificationCronobacter sakazakii030104 developmental biologymembrane permeabilitythermal inactivationSalmonella enterica;Cronobacter sakazakii;membrane permeability;respiratory activity;heat treatment;dryingescherichia-coliBacteria
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Influence of the Fabrication Accuracy of Hot-Embossed PCL Scaffolds on Cell Growths

2020

Polycaprolactone (PCL) is a biocompatible and biodegradable polymer widely used for the realization of 3D scaffold for tissue engineering applications. The hot embossing technique (HE) allows the obtainment of PCL scaffolds with a regular array of micro pillars on their surface. The main drawback affecting this kind of micro fabrication process is that such structural superficial details can be damaged when detaching the replica from the mold. Therefore, the present study has focused on the optimization of the HE processes through the development of an analytical model for the prediction of the demolding force as a function of temperature. This model allowed calculating the minimum demoldin…

0301 basic medicineScaffoldHistologyFabricationMaterials scienceScanning electron microscopelcsh:BiotechnologyBiomedical EngineeringBioengineering02 engineering and technologydemolding forcemedicine.disease_causeMicrostructured scaffold03 medical and health scienceschemistry.chemical_compoundmicrostructured scaffoldsTissue engineeringpolycaprolactoneMoldlcsh:TP248.13-248.65medicineCell viabilityCcell viabilityOriginal ResearchBioengineering and Biotechnology021001 nanoscience & nanotechnologyMicrostructureBiodegradable polymer030104 developmental biologychemistryhot embossingPolycaprolactone0210 nano-technologyCell viability; Demolding force; Hot embossing; Microstructured scaffolds; PolycaprolactoneBiotechnologyBiomedical engineeringFrontiers in Bioengineering and Biotechnology
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Health and Disease Imprinted in the Time Variability of the Human Microbiome

2017

The human microbiota correlates closely with the health status of its host. This article analyzes the microbial composition of several subjects under different conditions over time spans that ranged from days to months. Using the Langevin equation as the basis of our mathematical framework to evaluate microbial temporal stability, we proved that stable microbiotas can be distinguished from unstable microbiotas. This initial step will help us to determine how temporal microbiota stability is related to a subject’s health status and to develop a more comprehensive framework that will provide greater insight into this complex system.

0301 basic medicineScaling lawPhysiologySystems biologyPopulationlcsh:QR1-502microbiomeDiseaseGut floraBiochemistryMicrobiologylcsh:MicrobiologyHost-Microbe Biology03 medical and health sciences0302 clinical medicineGeneticsMicrobiomeeducationMolecular BiologyEcology Evolution Behavior and Systematicseducation.field_of_studymetagenomicsbiologyHuman microbiomesystems biologystabilitybiology.organism_classificationEditor's PickQR1-502Computer Science Applications030104 developmental biologyEvolutionary biologyMetagenomicsModeling and Simulationecological modeling030217 neurology & neurosurgeryResearch ArticlemSystems
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GSaaS: A Service to Cloudify and Schedule GPUs

2018

Cloud technology is an attractive infrastructure solution that provides customers with an almost unlimited on-demand computational capacity using a pay-per-use approach, and allows data centers to increase their energy and economic savings by adopting a virtualized resource sharing model. However, resources such as graphics processing units (GPUs), have not been fully adapted to this model. Although, general-purpose computing on graphics processing units (GPGPU) is becoming more and more popular, cloud providers lack of flexibility to manage accelerators, because of the extended use of peripheral component interconnect (PCI) passthrough techniques to attach GPUs to virtual machines (VMs). F…

0301 basic medicineScheduleGeneral Computer ScienceComputer scienceDistributed computingnetworkingCloud computing02 engineering and technologycomputer.software_genre03 medical and health sciencesGPU resource management020204 information systems0202 electrical engineering electronic engineering information engineeringCloud computingGeneral Materials ScienceResource managementplatform virtualizationbusiness.industrycloud computingGeneral EngineeringVirtualizationShared resource030104 developmental biologyVirtual machineScalabilityGPU cloudificationlcsh:Electrical engineering. Electronics. Nuclear engineeringGeneral-purpose computing on graphics processing unitsbusinesscomputerlcsh:TK1-9971IEEE Access
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Increased RNA virus population diversity improves adaptability

2021

The replication machinery of most RNA viruses lacks proofreading mechanisms. As a result, RNA virus populations harbor a large amount of genetic diversity that confers them the ability to rapidly adapt to changes in their environment. In this work, we investigate whether further increasing the initial population diversity of a model RNA virus can improve adaptation to a single selection pressure, thermal inactivation. For this, we experimentally increased the diversity of coxsackievirus B3 (CVB3) populations across the capsid region. We then compared the ability of these high diversity CVB3 populations to achieve resistance to thermal inactivation relative to standard CVB3 populations in an…

0301 basic medicineSciencevirusesThermal StabilityBiologyMicrobiologíaArticleCell Line03 medical and health sciencesCapsidVirologyHumansRNA VirusesExperimental EvolutionGeneticsGenetic diversityExperimental evolutionMultidisciplinary030102 biochemistry & molecular biologyQRComputational BiologyGenetic VariationRNARNA virusBiodiversityDirected evolutionbiology.organism_classificationDeep Mutational ScanningBiological Evolution030104 developmental biologyAmino Acid SubstitutionExperimental evolutionCapsidMutationEpistasisMedicineCapsid ProteinsAdaptationhuman activities
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Snapshots of a shrinking partner: Genome reduction inSerratia symbiotica

2016

AbstractGenome reduction is pervasive among maternally-inherited endosymbiotic organisms, from bacteriocyte- to gut-associated ones. This genome erosion is a step-wise process in which once free-living organisms evolve to become obligate associates, thereby losing non-essential or redundant genes/functions. Serratia symbiotica (Gammaproteobacteria), a secondary endosymbiont present in many aphids (Hemiptera: Aphididae), displays various characteristics that make it a good model organism for studying genome reduction. While some strains are of facultative nature, others have established co-obligate associations with their respective aphid host and its primary endosymbiont (Buchnera). Further…

0301 basic medicineSerratiaRNA Stability030106 microbiologyved/biology.organism_classification_rank.speciesGenomicsGenomeArticle03 medical and health sciencesRNA TransferGammaproteobacteriaCluster AnalysisAmino AcidsModel organismGene030304 developmental biologyGene RearrangementGenetics0303 health sciencesMultidisciplinarybiologyObligate030306 microbiologyved/biologyBacteriocyteGene rearrangementGene Expression Regulation Bacterialbiochemical phenomena metabolism and nutritionbiology.organism_classificationBiosynthetic PathwaysRNA Bacterial030104 developmental biologyEvolutionary biologyGenes BacterialBuchneraGenome Bacterial
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Multilocus microsatellite analysis of European and African Candida glabrata isolates

2016

This study aimed to elucidate the genetic relatedness and epidemiology of 127 clinical and environmental Candida glabrata isolates from Europe and Africa using multilocus microsatellite analysis. Each isolate was first identified using phenotypic and molecular methods and subsequently, six unlinked microsatellite loci were analyzed using automated fluorescent genotyping. Genetic relationships were estimated using the minimum-spanning tree (MStree) method. Microsatellite analyses revealed the existence of 47 different genotypes. The fungal population showed an irregular distribution owing to the over-representation of genetically different infectious haplotypes. The most common genotype was …

0301 basic medicineSettore MED/07 - Microbiologia E Microbiologia ClinicaClonal complexEpidemiologyMultilocus microsatellite analysisCandida glabrataMolecular phylogenyGene locusCentral typeRelated genotypeGenotypeEnvironmental MicrobiologyHaplotypeDNA FungalPriority journalGeneticsAlleleCandidiasisGeneral MedicineClassificationEuropePhenotypeInfectious DiseasesCandida Glabrata; Adhesins; FluconazoleCandidiasiMicrosatelliteMicrosatellite RepeatMicrobiological examinationHumanMicrobiology (medical)GenotypeSettore MED/17 - Malattie InfettiveMicrosatellite DNA030106 microbiologyBiologyEuropeanMicrobiologyArticle03 medical and health sciencesGenetic variationMicrosatellite repeatsGeneticsHumansAlleleGenotypingAllelesScience & TechnologyCandida glabrataMicrosatellite markerHaplotypeAfricanGenetic Variationbiology.organism_classificationNonhuman030104 developmental biologyFungal DNAHaplotypesIsolation and purificationGenetic LociAfricaMultilocus sequence typingFungus isolationGenetic variabilityMicrosatellite genotypeMultilocus Sequence Typing
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Temporal variation in the distribution of type-1 human astrovirus lineages in a settled population over 14 years.

2016

Human astroviruses (HAstVs) are important enteric pathogens that are genetically and antigenically heterogeneous and can be classified into eight sero/genotypes (HAstV-1 to -8) and different lineages within each HAstV type. This study describes the genetic diversity of HAstVs circulating in southern Italy over 14 years. Molecular analysis of HAstV-1 strains showed that three different lineages (1a, 1b and 1d) of the predominant genotype were circulating during the study period. The study of an archival collection of HAstV strains offers a unique opportunity to evaluate the patterns of variation of HAstV infections over the years and to correlate the observed epidemiological changes to the g…

0301 basic medicineSettore MED/07 - Microbiologia E Microbiologia Clinicamedicine.medical_specialtyTime FactorsGenotypePopulationGenome ViralBiology03 medical and health sciencesOpen Reading FramesMedical microbiologyVirologyAstroviridae InfectionsAstrovirus genotyping ItalyGenotypemedicineHumansGenetic variabilityeducationPhylogenyGeneticseducation.field_of_studyGenetic diversityMolecular EpidemiologyGenetic VariationGeneral MedicineHuman astrovirusMolecular analysis030104 developmental biologyItalyMamastrovirusArchives of virology
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