Search results for "Algal"

showing 10 items of 94 documents

The Ectocarpus genome and the independent evolution of multicellularity in brown algae

2010

Brown algae (Phaeophyceae) are complex photosynthetic organisms with a very different evolutionary history to green plants, to which they are only distantly related. These seaweeds are the dominant species in rocky coastal ecosystems and they exhibit many interesting adaptations to these, often harsh, environments. Brown algae are also one of only a small number of eukaryotic lineages that have evolved complex multicellularity (Fig. 1). We report the 214 million base pair (Mbp) genome sequence of the filamentous seaweed Ectocarpus siliculosus (Dillwyn) Lyngbye, a model organism for brown algae, closely related to the kelps (Fig. 1). Genome features such as the presence of an extended set of…

0106 biological sciencesLineage (evolution)Molecular Sequence DataPhaeophyta01 natural sciencesGenomeEvolution Molecular03 medical and health sciencesAlgae[SDV.BDD] Life Sciences [q-bio]/Development BiologyBotanyBIOLOGIE CELLULAIREAnimals14. Life underwater[SDV.BDD]Life Sciences [q-bio]/Development Biologyflore marinePhylogenyOrganismComputingMilieux_MISCELLANEOUSphéophycées030304 developmental biology0303 health sciencesGenomeMultidisciplinarybiologyEctocarpus siliculosusAlgal ProteinsEukaryotaPigments BiologicalEctocarpus15. Life on landbiology.organism_classificationBiological EvolutionBrown algaeMulticellular organismEvolutionary biologyalgues brunesBiologieSignal Transduction010606 plant biology & botany
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Activation of a nuclear-localized SIPK in tobacco cells challenged by cryptogein, an elicitor of plant defence reactions.

2009

When a plant cell is challenged by a well-defined stimulus, complex signal transduction pathways are activated to promote the modulation of specific sets of genes and eventually to develop adaptive responses. In this context, protein phosphorylation plays a fundamental role through the activation of multiple protein kinase families. Although the involvement of protein kinases at the plasma membrane and cytosolic levels are now well-documented, their nuclear counterparts are still poorly investigated. In the field of plant defence reactions, no known study has yet reported the activation of a nuclear protein kinase and/or its nuclear activity in plant cells, although some protein kinases, e.…

0106 biological sciencesMAPK/ERK pathwayMolecular Sequence DataActive Transport Cell NucleusBiology01 natural sciencesBiochemistryMAP2K703 medical and health sciencesCytosolTobaccoASK1Protein phosphorylation[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyAmino Acid SequenceNuclear proteinProtein kinase AMolecular BiologyConserved Sequence030304 developmental biologyPlant ProteinsCell Nucleus0303 health sciencesKinasePlant ExtractsAlgal ProteinsLife SciencesCell BiologyCell biologyEnzyme ActivationBiochemistrySignal transductionMitogen-Activated Protein KinasesSequence Alignment010606 plant biology & botanySignal TransductionThe Biochemical journal
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The Chlamydomonas genome reveals the evolution of key animal and plant functions

2007

Chlamydomonas reinhardtii is a unicellular green alga whose lineage diverged from land plants over 1 billion years ago. It is a model system for studying chloroplast-based photosynthesis, as well as the structure, assembly, and function of eukaryotic flagella (cilia), which were inherited from the common ancestor of plants and animals, but lost in land plants. We sequenced the ∼120-megabase nuclear genome of Chlamydomonas and performed comparative phylogenomic analyses, identifying genes encoding uncharacterized proteins that are likely associated with the function and biogenesis of chloroplasts or eukaryotic flagella. Analyses of the Chlamydomonas genome advance our understanding of the a…

0106 biological sciencesMESH: Sequence Analysis DNAMESH: Algal ProteinsChloroplastsProteomeMESH: PlantsChlamydomonas reinhardtii01 natural sciencesGenomeMESH: Membrane Transport ProteinsDNA AlgalMESH: DNA AlgalMESH: AnimalsGoniumPhotosynthesisMESH: PhylogenyMESH: PhotosynthesisPhylogenyGenetics0303 health sciencesGenomeMultidisciplinarybiologyMESH: Genomicsfood and beveragesGenomicsPlantsBiological EvolutionMESH: Genes[SDV.BBM.BC]Life Sciences [q-bio]/Biochemistry Molecular Biology/Biomolecules [q-bio.BM]MESH: ProteomeFlagellaMultigene FamilyMESH: Computational BiologyMESH: Chlamydomonas reinhardtiiNuclear geneMolecular Sequence Data[SDV.BC]Life Sciences [q-bio]/Cellular BiologyFlagellumMESH: FlagellaArticle03 medical and health sciencesIntraflagellar transportMESH: EvolutionAnimalsMESH: Genome[SDV.BBM.BC]Life Sciences [q-bio]/Biochemistry Molecular Biology/Biochemistry [q-bio.BM]Gene[SDV.BC] Life Sciences [q-bio]/Cellular Biology030304 developmental biologyMESH: Molecular Sequence DataMESH: ChloroplastsAlgal ProteinsChlamydomonasComputational BiologyMembrane Transport ProteinsSequence Analysis DNAbiology.organism_classificationGenesMESH: Multigene FamilyChlamydomonas reinhardtii010606 plant biology & botany
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Mediterranean sponges from shallow subtidal rocky reefs: Cystoseira canopy vs barren grounds

2018

Abstract Porifera richness was investigated in Cystoseira canopies vs barren grounds considering different substrates at 6 areas in the Central-Western Mediterranean Sea. In total 31 sponge taxa were recorded at 2–7 m depth and the sponge community structure and composition were characterized by a notably low richness with 25 taxa in the Cystoseira forest and 15 in the barren area. As for the sponge habitus, the massive sponges were dominant in both facies, whereas encrusting, and cavity dwelling sponges were found in higher numbers in the Cystoseira forest. Results revealed that rocky substrata seem to play a key role in driving the sponge community composition and diversity in both facies…

0106 biological sciencesMediterranean climateAquatic ScienceCystoseiraOceanography010603 evolutionary biology01 natural sciencesMediterranean seaSpecies inventoryAlgal canopy Biogeography Desertified benthic grounds Habitus Porifera Species inventory SubstrataReefInvertebrategeography.geographical_feature_categoryDesertified benthic groundsbiologyEcology010604 marine biology & hydrobiologyHabitusbiology.organism_classificationAlgal canopyPoriferaSubstrataSpongeGeographyBiogeographyBenthic zoneSpecies richnessEstuarine, Coastal and Shelf Science
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Structuring factors of the spatio-temporal variability of macrozoobenthos assemblages in a southern Mediterranean lagoon: How useful for bioindicatio…

2017

International audience; The authors investigated the impact of the extension of the El Kantra Channel on the composition and structure of macrobenthic assemblages in Boughrara Lagoon (Gulf of Gabes, Tunisia along with the use of 4 biotic indices (AMBI, BENTIX, M-AMBI and TUBI). Thirteen stations were sampled seasonally in 2012–2013. Forty-one species were found in 2012–2013 not recorded in 2009–2010, including 20 species of polychaetes belonging to the trophic groups of deposit-feeders and carnivores which are expected to increase in areas disturbed by organic pollution. During the survey, we recorded a high fish mortality, essentially caused by the development of harmful algal blooms (HAB)…

0106 biological sciencesMediterranean climateBiotic indicesFood ChainTunisiaBiodiversityBenthic macrofaunaSpatio-temporal variability010501 environmental sciencesAquatic ScienceOceanography01 natural sciencesAlgal bloom[ SDE ] Environmental SciencesMediterranean seaSpatio-Temporal AnalysisMediterranean SeaAnimalsEcosystemSeawater14. Life underwaterEcosystem0105 earth and related environmental sciencesTrophic levelPolychaetebiologyEcology010604 marine biology & hydrobiologyEcological statusFishesBiodiversityEutrophicationbiology.organism_classificationPollutionTrophic structureInvertebrates6. Clean waterOceanography13. Climate action[SDE]Environmental SciencesDinoflagellidaEnvironmental scienceSeasonsBoughrara lagoonEutrophicationEnvironmental MonitoringMarine pollution bulletin
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Assessing global range expansion in a cryptic species complex: insights from the red seaweed genus Asparagopsis (Florideophyceae)

2017

The mitochondrial genetic diversity, distribution and invasive potential of multiple cryptic operational taxonomic units (OTUs) of the red invasive seaweed Asparagopsis were assessed by studying introduced Mediterranean and Hawaiian populations. Invasive behavior of each Asparagopsis OTU was inferred from phylogeographic reconstructions, past historical demographic dynamics, recent range expansion assessments and future distributional predictions obtained from demographic models. Genealogical networks resolved Asparagopsis gametophytes and tetrasporophytes into four A. taxiformis and one A. armata cryptic OTUs. Falkenbergia isolates of A. taxiformis L3 were recovered for the first time in t…

0106 biological sciencesMediterranean climateSpecies complexfood.ingredientRange (biology)biological invasionsPopulationPlant SciencephylogeographyAquatic ScienceBiologyDNA Mitochondrial010603 evolutionary biology01 natural sciencesHawaiiDNA AlgalMediterranean seafoodEffective population sizeMediterranean SeaAsparagopsiseducationeducation.field_of_studyPlant DispersalEcology010604 marine biology & hydrobiologySequence Analysis DNAspecies distribution modellingSeaweedPhylogeographyPhylogeographymarine algaeRhodophytaIntroduced SpeciesJournal of Phycology
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Evidence for specific, high-affinity binding sites for a proteinaceous elicitor in tobacco plasma membrane

1995

Abstract Binding of cryptogein, a proteinaceous elicitor, was studied on tobacco plasma membrane. The binding of the [125I]cryptogein was saturable, reversible and specific with an apparent Kd of 2 nM. A single class of cryptogein binding sites was found with a sharp optimum pH for binding at about pH 7.0. The high-affinity correlates with cryptogein concentrations required for biological activity in vivo.

0106 biological sciencesNicotiana tabacumBiophysics[SDV.BC]Life Sciences [q-bio]/Cellular Biology01 natural sciencesBiochemistryFungal Proteins03 medical and health sciencesStructural BiologyIn vivoTobaccoGeneticsBinding siteReceptor[SDV.BC] Life Sciences [q-bio]/Cellular BiologyMolecular BiologyComputingMilieux_MISCELLANEOUS030304 developmental biology0303 health sciencesBinding SitesbiologyNicotiana tabacumChemistryAlgal ProteinsCell MembraneElicitinBiological activityCell BiologyElicitorbiology.organism_classification3. Good healthElicitorKineticsPlants ToxicMembraneBiochemistryCryptogeinPlasma membraneReceptor010606 plant biology & botany
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Real-time electrochemical detection of extracellular nitric oxide in tobacco cells exposed to cryptogein, an elicitor of defence responses

2008

International audience; It was previously reported that cryptogein, an elicitor of defence responses, induces an intracellular production of nitric oxide (NO) in tobacco. Here, the possibility was explored that cryptogein might also trigger an increase of NO extracellular content through two distinct approaches, an indirect method using the NO probe 4,5-diaminofluorescein (DAF-2) and an electrochemical method involving a chemically modified microelectrode probing free NO in biological media. While the chemical nature of DAF-2-reactive compound(s) is still uncertain, the electrochemical modified microelectrodes provide real-time evidence that cryptogein induces an increase of extracellular N…

0106 biological sciencesPhysiologyPLANT DEFENSE RESPONSEPlant ScienceElectrochemical detectionBiology01 natural sciencesDIETHYLAMINE NONOATENitric oxide[SDV.BV.BOT] Life Sciences [q-bio]/Vegetal Biology/BotanicsFungal Proteins03 medical and health scienceschemistry.chemical_compoundTobaccoBotanyElectrochemistryExtracellularCells Cultured030304 developmental biology0303 health sciencesFungal proteinAlgal Proteins[SDV.BV.BOT]Life Sciences [q-bio]/Vegetal Biology/BotanicsResearch PapersElectrochemical gas sensorElicitorMicroelectrodechemistryBiophysicsDIAMINOFLUORESCEINplant defence responsesIntracellularELECTROCHEMICAL SENSORNITRIC OXIDE010606 plant biology & botany
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Phosphoproteins Involved in the Signal Transduction of Cryptogein, an Elicitor of Defense Reactions in Tobacco

2000

We previously reported that the signal transduction of cryptogein, an elicitor of defense reactions in Nicotiana tabacum cells, involves upstream protein phosphorylation. In the present study, induction of these early physiological events was further investigated with inhibitors of protein phosphatase (PP), okadaïc acid, and calyculin A. Calyculin A mimicked the effects of cryptogein, inducing an influx of calcium, an extracellular alkalinization, and the production of active oxygen species (AOS), suggesting that during cryptogein signal transduction the balance between specific protein kinase (PK) and PP activities was modified. To identify the phosphorylated proteins that could be involv…

0106 biological sciencesPhysiologyPhosphataseBiology01 natural sciencesFungal Proteins03 medical and health scienceschemistry.chemical_compound[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]TobaccoPhosphoprotein Phosphatasesmedicine[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyStaurosporineProtein phosphorylationEnzyme InhibitorsPhosphorylationProtein Kinase InhibitorsComputingMilieux_MISCELLANEOUS030304 developmental biology0303 health sciencesFungal proteinIon TransportAlgal ProteinsGeneral MedicinePhosphoproteinsElicitorPlants ToxicchemistryBiochemistryPhosphorylationCalciumSignal transductionAgronomy and Crop ScienceSignal Transduction010606 plant biology & botanyCalyculinmedicine.drugMolecular Plant-Microbe Interactions®
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Elicitins trap and transfer sterols from micelles, liposomes and plant plasma membranes

1999

Using elicitins, proteins secreted by some phytopathogenic Oomycetes (Phytophthora) known to be able to transfer sterols between phospholipid vesicles, the transfer of sterols between micelles, liposomes and biological membranes was studied. Firstly, a simple fluorometric method to screen the sterol-carrier capacity of proteins, avoiding the preparation of sterolcontaining phospholipidic vesicles, is proposed. The transfer of sterols between DHE micelles (donor) and stigmasterol or cholesterol micelles (acceptor) was directly measured, as the increase in DHE fluorescence signal. The results obtained with this rapid and easy method lead to the same conclusions as those previously reported, u…

0106 biological sciencesPhytophthoraTime FactorsStigmasterolBiophysics01 natural sciencesMicelleBiochemistryFluorescenceFungal Proteins03 medical and health scienceschemistry.chemical_compoundErgosterolpolycyclic compoundsMicellesPlant Proteins030304 developmental biology0303 health sciencesLiposomeStigmasterolChemistryVesicleAlgal ProteinsCell MembraneProteinsElicitinBiological membraneLipid–protein interactionCell BiologyPlantsElicitinSterolsCholesterolMembraneBiochemistryDehydroergosterolLiposomeslipids (amino acids peptides and proteins)CryptogeinCarrier ProteinsFluorescence anisotropy010606 plant biology & botanyBiochimica et Biophysica Acta (BBA) - Biomembranes
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