Search results for "Biomedical engineering"

showing 10 items of 2020 documents

Multiscale analysis of information dynamics for linear multivariate processes.

2016

In the study of complex physical and physiological systems represented by multivariate time series, an issue of great interest is the description of the system dynamics over a range of different temporal scales. While information-theoretic approaches to the multiscale analysis of complex dynamics are being increasingly used, the theoretical properties of the applied measures are poorly understood. This study introduces for the first time a framework for the analytical computation of information dynamics for linear multivariate stochastic processes explored at different time scales. After showing that the multiscale processing of a vector autoregressive (VAR) process introduces a moving aver…

FOS: Computer and information sciencesInformation transferMultivariate statisticsMultivariate analysisComputer scienceComputer Science - Information Theory0206 medical engineeringStochastic ProcesseBiomedical EngineeringFOS: Physical sciencesInformation Storage and RetrievalHealth Informatics02 engineering and technology01 natural sciencesEntropy (classical thermodynamics)Moving average0103 physical sciencesEntropy (information theory)Computer SimulationStatistical physicsEntropy (energy dispersal)Time series010306 general physicsEntropy (arrow of time)Multivariate Analysi1707Stochastic ProcessesEntropy (statistical thermodynamics)Stochastic processInformation Theory (cs.IT)Probability and statisticsModels Theoretical020601 biomedical engineeringComplex dynamicsAutoregressive modelPhysics - Data Analysis Statistics and ProbabilitySignal ProcessingSettore ING-INF/06 - Bioingegneria Elettronica E InformaticaMultivariate AnalysisData Analysis Statistics and Probability (physics.data-an)Entropy (order and disorder)Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference
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Synergetic and redundant information flow detected by unnormalized Granger causality: application to resting state fMRI

2015

Objectives: We develop a framework for the analysis of synergy and redundancy in the pattern of information flow between subsystems of a complex network. Methods: The presence of redundancy and/or synergy in multivariate time series data renders difficult to estimate the neat flow of information from each driver variable to a given target. We show that adopting an unnormalized definition of Granger causality one may put in evidence redundant multiplets of variables influencing the target by maximizing the total Granger causality to a given target, over all the possible partitions of the set of driving variables. Consequently we introduce a pairwise index of synergy which is zero when two in…

FOS: Computer and information sciencesgranger causality (GC)Multivariate statisticsComputer scienceRestComputer Science - Information TheoryBiomedical EngineeringsynergyFOS: Physical sciencescomputer.software_genre01 natural sciences03 medical and health sciences0302 clinical medicineGranger causality0103 physical sciencesConnectomeRedundancy (engineering)HumansBrain connectivityTime series010306 general physicsModels StatisticalHuman Connectome ProjectResting state fMRIredundancybusiness.industryInformation Theory (cs.IT)functional magnetic resonance imaging (fMRI)BrainPattern recognitionComplex networkMagnetic Resonance ImagingVariable (computer science)Physics - Data Analysis Statistics and ProbabilityQuantitative Biology - Neurons and CognitionFOS: Biological sciencesSettore ING-INF/06 - Bioingegneria Elettronica E InformaticaPairwise comparisonNeurons and Cognition (q-bio.NC)Artificial intelligenceData miningNerve Netbusinesscomputer030217 neurology & neurosurgeryData Analysis Statistics and Probability (physics.data-an)
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A rule‐based method to model myocardial fiber orientation in cardiac biventricular geometries with outflow tracts

2019

Rule-based methods are often used for assigning fiber orientation to cardiac anatomical models. However, existing methods have been developed using data mostly from the left ventricle. As a consequence, fiber information obtained from rule-based methods often does not match histological data in other areas of the heart such as the right ventricle, having a negative impact in cardiac simulations beyond the left ventricle. In this work, we present a rule-based method where fiber orientation is separately modeled in each ventricle following observations from histology. This allows to create detailed fiber orientation in specific regions such as the endocardium of the right ventricle, the inter…

FOS: Computer and information sciencesmedicine.medical_specialtyHeart VentriclesBiomedical EngineeringFOS: Physical sciencesVolume mesh030204 cardiovascular system & hematology[INFO.INFO-AI]Computer Science [cs]/Artificial Intelligence [cs.AI]030218 nuclear medicine & medical imagingComputational Engineering Finance and Science (cs.CE)03 medical and health sciences0302 clinical medicineRule-based methodInternal medicine[INFO.INFO-IM]Computer Science [cs]/Medical ImagingmedicineHumansComputer SimulationElectrophysiological simulationsInterventricular septumOutflow tractComputer Science - Computational Engineering Finance and ScienceMolecular BiologyEndocardiumFiber (mathematics)Orientation (computer vision)MyocardiumApplied MathematicsFiber orientationOutflow tract ventricular arrhythmiaModels CardiovascularRule-based systemSeptumMagnetic Resonance Imaging[INFO.INFO-MO]Computer Science [cs]/Modeling and SimulationPhysics - Medical PhysicsElectrophysiological Phenomenamedicine.anatomical_structureComputational Theory and MathematicsVentricleModeling and Simulationcardiovascular systemCardiologyOutflowMedical Physics (physics.med-ph)SoftwareGeologyInternational Journal for Numerical Methods in Biomedical Engineering
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Multiscale partial information decomposition of dynamic processes with short and long-range correlations: theory and application to cardiovascular co…

2022

Abstract Objective. In this work, an analytical framework for the multiscale analysis of multivariate Gaussian processes is presented, whereby the computation of Partial Information Decomposition measures is achieved accounting for the simultaneous presence of short-term dynamics and long-range correlations. Approach. We consider physiological time series mapping the activity of the cardiac, vascular and respiratory systems in the field of Network Physiology. In this context, the multiscale representation of transfer entropy within the network of interactions among Systolic arterial pressure (S), respiration (R) and heart period (H), as well as the decomposition into unique, redundant and s…

FOS: Computer and information sciencesmultivariate time seriesPhysiologyEntropyRespirationBiomedical EngineeringBiophysicsheart rate variabilitytransfer entropyredundancy and synergyBlood PressureHeartQuantitative Biology - Quantitative MethodsCardiovascular SystemMethodology (stat.ME)Heart RatePhysiology (medical)FOS: Biological sciencesCardiovascular controlSettore ING-INF/06 - Bioingegneria Elettronica E Informaticavector autoregressive fractionally integrated (VARFI) modelsHumansQuantitative Methods (q-bio.QM)Statistics - MethodologyPhysiological measurement
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Need for lateral bone augmentation at two narrow-diameter implants: A prospective, controlled, clinical study.

2021

To detect the potential influence of implant diameter and anatomic factors on the need for bone augmentation procedures (BAPs) when replacing congenitally missing lateral incisors (MLIs).Patients with congenitally missing MLIs with a mesio-distal distance between the canine and the central incisor of 5.9-6.3 mm received a Ø2.9 mm implant while Ø3.3 mm implants were placed when the distance was 6.4-7.1 mm. The following linear measurements were recorded using a calliper: width of the alveolar process (WAP), width of the bony alveolar ridge (WAR) and thickness of the facial bone after implant osteotomy (TFB). Guided bone regeneration was performed in case of fenestration- or dehiscence-type d…

Facial boneBone Regenerationmedicine.medical_treatment0206 medical engineering02 engineering and technologyOsteotomyBone augmentationClinical study03 medical and health sciences0302 clinical medicineAlveolar ProcessMedicineHumansMaxillary central incisorProspective StudiesBone regenerationOrthodonticsDental Implantsbusiness.industryAlveolar processDental Implantation Endosseous030206 dentistryAlveolar Ridge Augmentation020601 biomedical engineeringmedicine.anatomical_structureImplantOral SurgerybusinessClinical oral implants researchREFERENCES
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Remote heart rate variability for emotional state monitoring

2018

International audience; Several researches have been conducted to recognize emotions using various modalities such as facial expressions , gestures, speech or physiological signals. Among all these modalities, physiological signals are especially interesting because they are mainly controlled by the autonomic nervous system. It has been shown for example that there is an undeniable relationship between emotional state and Heart Rate Variability (HRV). In this paper, we present a methodology to monitor emotional state from physiological signals acquired remotely. The method is based on a remote photoplethysmography (rPPG) algorithm that estimates remote Heart Rate Variability (rHRV) using a …

Facial expressionModalities[ INFO.INFO-TS ] Computer Science [cs]/Signal and Image Processing[INFO.INFO-TS] Computer Science [cs]/Signal and Image ProcessingComputer scienceSpeech recognition020208 electrical & electronic engineering0206 medical engineering[INFO.INFO-CV]Computer Science [cs]/Computer Vision and Pattern Recognition [cs.CV]02 engineering and technology[ INFO.INFO-CV ] Computer Science [cs]/Computer Vision and Pattern Recognition [cs.CV]020601 biomedical engineeringSignal[INFO.INFO-CV] Computer Science [cs]/Computer Vision and Pattern Recognition [cs.CV][INFO.INFO-TS]Computer Science [cs]/Signal and Image ProcessingFeature (computer vision)Frequency domainPhotoplethysmogram0202 electrical engineering electronic engineering information engineeringHeart rate variabilityGesture
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Facial Expressions to Evaluate Advertising: A Laboratory versus Living Room Study

2017

In recent years researchers have shown growing interest in the impact of emotions in television commercials and in advertising in general (Park and Thorson, 1990). Emotions also influence the attitude towards the brand and to the ad (Batney and Ray, 1986; Edell and Burke, 1987; Derbaix, 1995), increase the attention of the advertisement (Olney, Hobrook and Bartra, 1991), and brand recall (Stayman and Batra, 1991).

Facial expressionRecall0206 medical engineering05 social sciences0501 psychology and cognitive sciencesAdvertising050102 behavioral science & comparative psychology02 engineering and technologyExplicit methodLiving roomPsychology020601 biomedical engineering
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General Principles for the Detection of Modified Nucleotides in RNA by Specific Reagents.

2021

Epitranscriptomics heavily rely on chemical reagents for the detection, quantification, and localization of modified nucleotides in transcriptomes. Recent years have seen a surge in mapping methods that use innovative and rediscovered organic chemistry in high throughput approaches. While this has brought about a leap of progress in this young field, it has also become clear that the different chemistries feature variegated specificity and selectivity. The associated error rates, e.g., in terms of false positives and false negatives, are in large part inherent to the chemistry employed. This means that even assuming technically perfect execution, the interpretation of mapping results issuin…

False positives and false negativesBiomedical Engineering[SDV.BBM.BM] Life Sciences [q-bio]/Biochemistry Molecular Biology/Molecular biology01 natural sciencesGeneral Biochemistry Genetics and Molecular Biology570 Life sciencesBiomaterialsReaction rate03 medical and health sciences[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]Reactivity (chemistry)NucleotideRNA Processing Post-TranscriptionalComputingMilieux_MISCELLANEOUS030304 developmental biologychemistry.chemical_classification0303 health sciences010405 organic chemistryNucleotidesRNA[SDV.BBM.BM]Life Sciences [q-bio]/Biochemistry Molecular Biology/Molecular biology0104 chemical scienceschemistryReagent[SDV.BBM.GTP] Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]RNAIndicators and ReagentsRibonucleosidesBiological systemSelectivity570 BiowissenschaftenAdvanced biology
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Classification of Heart Sounds Using Convolutional Neural Network

2020

Heart sounds play an important role in the diagnosis of cardiac conditions. Due to the low signal-to-noise ratio (SNR), it is problematic and time-consuming for experts to discriminate different kinds of heart sounds. Thus, objective classification of heart sounds is essential. In this study, we combined a conventional feature engineering method with deep learning algorithms to automatically classify normal and abnormal heart sounds. First, 497 features were extracted from eight domains. Then, we fed these features into the designed convolutional neural network (CNN), in which the fully connected layers that are usually used before the classification layer were replaced with a global averag…

Feature engineeringComputer science0206 medical engineeringconvolutional neural networkneuroverkot02 engineering and technologyOverfittingConvolutional neural networklcsh:Technologylcsh:Chemistry0202 electrical engineering electronic engineering information engineeringFeature (machine learning)General Materials ScienceSensitivity (control systems)sydäntauditInstrumentationlcsh:QH301-705.5Fluid Flow and Transfer Processesbusiness.industrylcsh:TProcess Chemistry and TechnologyDeep learning020208 electrical & electronic engineeringGeneral EngineeringPattern recognitiondiagnostiikkaMatthews correlation coefficientautomatic heart sound classification020601 biomedical engineeringlcsh:QC1-999Computer Science Applicationsfeature engineeringkoneoppiminenlcsh:Biology (General)lcsh:QD1-999lcsh:TA1-2040Heart soundsArtificial intelligencetiedonlouhintabusinesslcsh:Engineering (General). Civil engineering (General)lcsh:PhysicsApplied Sciences
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Colourimetric image analysis as a diagnostic tool in female genital schistosomiasis

2015

Female genital schistosomiasis (FGS) is a highly prevalent waterborne disease in some of the poorest areas of sub-Saharan Africa. Reliable and affordable diagnostics are unavailable. We explored colourimetric image analysis to identify the characteristic, yellow lesions caused by FGS. We found that the method may yield a sensitivity of 83% and a specificity of 73% in colposcopic images. The accuracy was also explored in images of simulated inferior quality, to assess the possibility of implementing such a method in simple, electronic devices. This represents the first step towards developing a safe and affordable aid in clinical diagnosis, allowing for a point-of-care approach.

Female circumcisionmedicine.medical_specialtyAdolescent030231 tropical medicineBiophysicsBiomedical EngineeringSchistosomiasisReproductive Tract Infections03 medical and health sciencesYoung Adult0302 clinical medicinemedicineImage Processing Computer-AssistedHumansSchistosomiasis030212 general & internal medicineDiagnosis Computer-AssistedGynecologyColposcopymedicine.diagnostic_testbusiness.industryWaterborne diseasesmedicine.disease3. Good healthROC CurveClinical diagnosisColorimetryFemaleRadiologybusinessCell PhoneMedical Engineering & Physics
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