Search results for "CALCITE"

showing 10 items of 191 documents

Characterization and origin of permeability-porosity heterogeneity in shallow-marine carbonates: from core scale to 3D reservoir dimension (Middle Ju…

2014

21 pages; International audience; Nuclear magnetic resonance (NMR), stable isotope geochemistry of micro-sampled cores, NMR well-logs and 3D modeling are used to investigate the carbonate permeability-porosity heterogeneity along 230 m-thick limestones of the Paris Basin. Despite the global low porosity and permeability of the limestones, two aquifers units with porosity greater than 15% were identified. These two aquifers are very different in terms of pore through radii and NMR signal. The first one (A1: Aquifer 1) is a 7 m-thick mudstone unit, dominated by extended microporosity with pore throat radii of 0.25 μm to 0.3 μm. The second one (A2: Aquifer 2) is a 15 m-thick oolitic grainstone…

CarbonateStratigraphyPetrography[SDU.STU.PE]Sciences of the Universe [physics]/Earth Sciences/PetrographyMineralogyAquiferNeomorphismengineering.materialOceanography[ SDU.STU.ST ] Sciences of the Universe [physics]/Earth Sciences/StratigraphyDiagenesischemistry.chemical_compound[ SDU.STU.PE ] Sciences of the Universe [physics]/Earth Sciences/PetrographyCalcitegeographygeography.geographical_feature_categoryAragoniteModelingGeologySedimentologyPetrophysicCementation (geology)DiagenesisGeophysicschemistry[SDU.STU.ST]Sciences of the Universe [physics]/Earth Sciences/StratigraphyMeteoric waterengineeringCarbonateEconomic GeologyGeology
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Functional consequences of prey acclimation to ocean acidification for the prey and its predator

2016

Ocean acidification is the suite of chemical changes to the carbonate system of seawater as a consequence of anthropogenic carbon dioxide (CO2) emissions. Despite a growing body of evidences demonstrating the negative effects of ocean acidification on marine species, the consequences at the ecosystem level are still unclear. One factor limiting our ability to upscale from species to ecosystem is the poor mechanistic understanding of the functional consequences of the observed effects on organisms. This is particularly true in the context of species interactions. The aim of this work was to investigate the functional consequence of the exposure of a prey (the mussel Brachidontes pharaonis) t…

Condition indexRegistration number of speciesSalinityTemperateBottles or small containers/Aquaria (<20 L)inorganicAlkalinityBrachidontes pharaonisIncubation durationExperimentTemperature waterCarbon inorganic dissolvedAssimilation efficiencyEriphia verrucosaBreaking loadCalculated using seacarb after Nisumaa et al 2010Aragonite saturation stateAlkalinity totalBottles or small containers Aquaria 20 LtotalpHTemperaturePartial pressure of carbon dioxide (water) at sea surface temperature (wet air) standard errordissolvedCarbonate ionLaboratory experimentPartial pressure of carbon dioxide (water) at sea surface temperature (wet air)standard errorEarth System ResearchUniform resource locator link to referenceanimal structuresCalcite saturation stateArthropodaLengthwaterGrowth MorphologyFigureBenthosUniform resource locator/link to referenceMediterranean SeaAnimaliaBehaviourBicarbonate ionTime in secondsTypeTemperature water standard errorCalculated using seacarb after Nisumaa et al. (2010)SpeciespH standard errorCalcite saturation state standard errorGrowth rateBottles or small containers/Aquaria (&lt;20 L)Calculated using CO2SYSfungiCarbonate system computation flagFugacity of carbon dioxide (water) at sea surface temperature (wet air)CarbonTreatmentAragonite saturation state standard errorPartial pressure of carbon dioxide water at sea surface temperature wet airCarbon dioxideMolluscaGrowth/MorphologyBenthic animalsFugacity of carbon dioxide water at sea surface temperature wet airCoast and continental shelfSpecies interaction
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Discovery of Ca oxalate crystals associated with fungi in moss travertines (Bryoherms, freshwater heterogeneous stromatolites)

1995

Buffered decalcification of live moss and liverwort (Hepaticae) travertines resulted in the release of a large number of organisms (bacteria, cyanobacteria, fungi, eukaryotic algae, and small animals), which constitute an “organic mat”; (also called an algal mat or biofilm). This mat is calcified and commonly has laminations, allowing moss travertines to be considered as stromatolitic structures. After decalcification of 300 samples of travertines (using dilute acetic acid), only 9 released Ca oxalate crystals in the form of needle bundles, spherulites, and tetragonal bipyramidal prisms. These crystalline forms are identical to those found in some phanerophytes and soils. Mycelian filaments…

CyanobacteriaCalcitebiologyAragoniteengineering.materialbiology.organism_classificationMicrobiologyMossDiagenesischemistry.chemical_compoundAlgaeAlgal matchemistryBotanyEarth and Planetary Sciences (miscellaneous)engineeringEnvironmental ChemistryGeneral Environmental ScienceBiomineralizationGeomicrobiology Journal
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Three-dimensional solvation structure of ethanol on carbonate minerals

2020

Calcite and magnesite are important mineral constituents of the earth’s crust. In aqueous environments, these carbonates typically expose their most stable cleavage plane, the (10.4) surface. It is known that these surfaces interact with a large variety of organic molecules, which can result in surface restructuring. This process is decisive for the formation of biominerals. With the development of 3D atomic force microscopy (AFM) it is now possible to image solid–liquid interfaces with unprecedented molecular resolution. However, the majority of 3D AFM studies have been focused on the arrangement of water at carbonate surfaces. Here, we present an analysis of the assembly of ethanol – an o…

DYNAMICSMaterials scienceADSORPTIONSURFACECarbonate mineralsIonic bondingGeneral Physics and Astronomy02 engineering and technologylcsh:Chemical technology010402 general chemistrylcsh:Technology01 natural sciencesFull Research Paper3D AFMGENERAL FORCE-FIELDMolecular dynamicschemistry.chemical_compoundCALCITEMoleculeNanotechnologyWATERlcsh:TP1-1185General Materials ScienceElectrical and Electronic Engineeringlcsh:ScienceCalcitelcsh:THYDRATIONSolvationMD simulation021001 nanoscience & nanotechnologymagnesite540lcsh:QC1-9990104 chemical sciencesNanosciencechemistryChemical physicsCONJUGATE GRADIENTSCarbonatelcsh:Qethanol0210 nano-technologycalcitelcsh:Physicssolvation structureMagnesite
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Compressibility Systematics of Calcite-Type Borates: An Experimental and Theoretical Structural Study on ABO(3) (A = Al, Sc, Fe, and In)

2014

The structural properties of calcite-type orthoborates ABO(3) (A = Al, Fe, Sc, and In) have been investigated at high pressures up to 32 GPa. They were studied experimentally using synchrotron powder X-ray diffraction and theoretically by means of ab initio total-energy calculations. We found that the calcite-type structure remains stable up to the highest pressure explored in the four studied compounds. Experimental and calculated static geometries (unit-cell parameters and internal coordinates), bulk moduli, and their pressure derivatives are in good agreement. The compressibility along the c axis is roughly three times that along the a axis. Our data clearly indicate that the compressibi…

DiffractionAb initioThermodynamicschemistry.chemical_elementCrystal structureHigh-pressure behaviorchemistry.chemical_compoundstructure carbonatesCationshigh pressure behavior; augmented-wave method; structure carbonatesPhysical and Theoretical ChemistryBoronCalciteCrystal-structuresMetal refinementOxidesFeBO3Surfaces Coatings and FilmsElectronic Optical and Magnetic MaterialsCrystallographyGeneral Energyhigh pressure behaviorchemistryOctahedronAugmented-wave methodFISICA APLICADATransitionCompressibilityaugmented-wave methodCarbonateStructure carbonates
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Anisotropic lattice distortions in biogenic calcite induced by intra-crystalline organic molecules.

2006

9 pages; International audience; We have performed precise structural measurements on five different calcitic seashells by high-resolution X-ray powder diffraction on a synchrotron beam line and by laboratory single crystal X-ray diffraction. The unit cell parameters a and c of biogenic calcite were found to be systematically larger than those measured in the non-biogenic calcite. The maximum lattice distortion (about 2.10(-3)) was detected along the c-axis. Under heat treatment above 200 degrees C, a pronounced lattice relaxation was observed, which allowed us to conclude that anisotropic lattice swelling in biogenic calcite is induced by organic macromolecules incorporated within the sing…

DiffractionBiomineralizationMESH : Calcium CarbonateMESH: Bivalvia02 engineering and technologyCrystallography X-Ray01 natural scienceslaw.inventionchemistry.chemical_compoundStructural BiologylawMESH : BivalviaOstreaMESH : AnisotropyMESH: AnimalsOrganic ChemicalsCrystallizationAnisotropyMESH: CrystallizationCalciteMESH: OstreaSynchrotron radiationCalciteCrystal growth and nucleationMESH : Organic Chemicals021001 nanoscience & nanotechnologyMESH: Calcium CarbonateMESH : CrystallizationX-ray crystallographyCrystallization0210 nano-technologyMaterials scienceMESH : Crassostrea010402 general chemistryCalcium CarbonateAnimalsCrassostreaIntra-crystalline organic molecules[SDV.IB.BIO]Life Sciences [q-bio]/Bioengineering/BiomaterialsBiogenic crystalsMESH : OstreaMESH: Organic ChemicalsMESH: Crystallography X-Ray[ SDV.IB.BIO ] Life Sciences [q-bio]/Bioengineering/BiomaterialsBivalvia0104 chemical sciencesX-ray diffractionCrystallographyMESH: CrassostreachemistryMESH: AnisotropyAnisotropyMESH : AnimalsMESH : Crystallography X-RaySingle crystalPowder diffractionBiomineralization
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Calcification is not the Achilles'heel of cold-water corals in an acidifying ocean

2015

Ocean acidification is thought to be a major threat to coral reefs: laboratory evidence and CO2 seep research has shown adverse effects on many coral species, although a few are resilient. There are concerns that cold-water corals are even more vulnerable as they live in areas where aragonite saturation (Omega ara) is lower than in the tropics and is falling rapidly due to CO2 emissions. Here, we provide laboratory evidence that net (gross calcification minus dissolution) and gross calcification rates of three common cold-water corals, Caryophyllia smithii, Dendrophyllia cornigera, and Desmophyllum dianthus, are not affected by pCO2 levels expected for 2100 (pCO2 1058 µatm, Omega ara 1.29),…

Dissolution rateOcean Acidification International Coordination Centre (OA-ICC)TemperateIdentificationSalinityBicarbonate ion standard deviationinorganicAlkalinity total standard deviationAlkalinityExperimentTemperature waterCarbon inorganic dissolvedCalculated using seacarb after Nisumaa et al 2010Aragonite saturation stateRespiration rate oxygenAlkalinity totaltotalDesmophyllum dianthuspHRespirationTemperatureCalcification rate of calcium carbonatedissolvedLaboratory experimentCarbonate ionDeep seaPartial pressure of carbon dioxide (water) at sea surface temperature (wet air)Field experimentCarbon dioxide standard deviationTemperature water standard deviationContainers and aquaria 20 1000 L or 1 m 2Respiration rateEarth System ResearchContainers and aquaria (20-1000 L or &lt; 1 m**2)standard deviationCalcification/DissolutionPotentiometric titrationCalcite saturation statePotentiometricwaterPartial pressure of carbon dioxideCaryophyllia smithiiContainers and aquaria (20-1000 L or < 1 m**2)Dendrophyllia cornigeraFigureAragonite saturation state standard deviationBenthosCnidariaOcean Acidification International Coordination Centre OA ICCMediterranean SeaAnimaliaBicarbonate ionCalculated using seacarb after Nisumaa et al. (2010)SpeciesCalculated using CO2SYSfungiEvent labelDeep-seaPartial pressure of carbon dioxide standard deviationCarbonate system computation flagpH standard deviationCarbonate ion standard deviationbiochemical phenomena metabolism and nutritionFugacity of carbon dioxide (water) at sea surface temperature (wet air)CarbonTreatmentPartial pressure of carbon dioxide water at sea surface temperature wet airCarbon dioxideSingle speciesCalcification DissolutionFugacity of carbon dioxide water at sea surface temperature wet airBenthic animalsoxygen
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Seepage carbonate mounds in Cenozoic sedimentary sequences from the Las Minas Basin, SE Spain

2016

Abstract A number of carbonate mounds composed of indurate, strongly folded and/or brecciated calcite and dolomite beds occur interstratified in Cenozoic sedimentary sequences from the Las Minas Basin. Part of the fabric of the rock forming the carbonate mounds is composed of laminated to banded dolostone similar to the host rock but showing contrasted lithification. Moreover, the carbonate deposits of the mounds display aggrading neomorphism of dolomite, partial replacement of dolomite by calcite, calcite cementation, and extensive silicification, locally resulting in box-work fabric. Eight main lithofacies were distinguished in the carbonate mound deposits. In some lithofacies, chert is p…

DolostoneCalcite010506 paleontologyStratigraphySE SpainDolomiteGeochemistryPetrologíaGeologyartesian groundwaterNeomorphism010502 geochemistry & geophysics01 natural scienceschemistry.chemical_compoundchemistryCarbonate moundCarbonate rockCarbonateSedimentary rockseepage chertLithificationGeologycenozoic0105 earth and related environmental sciences
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Physicochemical characteristics of drip waters: Influence on mineralogy and crystal morphology of recent cave carbonate precipitates

2014

Speleothems are one of the most intensively explored continental archives for palaeoclimate variability. The parameters, however, that control speleothem petrography and its changes with time and space, specifically calcite crystal morphology and carbonate mineralogy, are still poorly understood. In order to shed light on processes and their products, precipitation experiments of recent carbonate crystals on watch glasses and glass plates were performed in seven selected caves. Drip water sites were analysed for their fluid Mg/Ca molar ratio, pH, degree of saturation for calcite and aragonite and drip rates. Corresponding precipitates were analysed with respect to their mineralogy, calcite …

DolostoneCalcitegeographygeography.geographical_feature_categoryAragoniteSpeleothemMineralogyengineering.materialPetrographyCrystalchemistry.chemical_compoundchemistryGeochemistry and PetrologyengineeringCarbonateCrystal habitGeologyGeochimica et Cosmochimica Acta
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Ocean acidification affects fish spawning but not paternity at CO2 seeps

2016

Fish exhibit impaired sensory function and altered behaviour at levels of ocean acidification expected to occur owing to anthropogenic carbon dioxide emissions during this century. We provide the first evidence of the effects of ocean acidification on reproductive behaviour of fish in the wild. Satellite and sneaker male ocellated wrasse (Symphodus ocellatus) compete to fertilize eggs guarded by dominant nesting males. Key mating behaviours such as dominant male courtship and nest defence did not differ between sites with ambient versus elevated CO2 concentrations. Dominant males did, however, experience significantly lower rates of pair spawning at elevated CO2 levels. Despite the higher r…

Eggs standard errorOcean Acidification International Coordination Centre (OA-ICC)TemperateRegistration number of speciesIdentificationSalinityEggsinorganicAlkalinityExperimentNumber standard errorDominant male paternityTemperature waterCarbon inorganic dissolvedNumber of individualsCalculated using seacarb after Nisumaa et al 2010Number of spawning events standard errorAragonite saturation stateFish standard lengthChordataAlkalinity totalSalinity standard errortotalCO2 ventReplicatesCourtship standard errorpHPelagosReproductionSymphodus ocellatusTemperatureNumberPartial pressure of carbon dioxide (water) at sea surface temperature (wet air) standard errordissolvedCarbonate ionPartial pressure of carbon dioxide (water) at sea surface temperature (wet air)standard errorIndividuals standard errorEarth System ResearchField observationFOS: Medical biotechnologyUniform resource locator link to referencePotentiometric titrationCalcite saturation stateLocationPotentiometricwaterNumber of spawning eventsAgeUniform resource locator/link to referenceOcean Acidification International Coordination Centre OA ICCMediterranean SeaAnimaliaEggs areaBehaviourTypeBicarbonate ionNektonEggs area standard errorTemperature water standard errorCalculated using seacarb after Nisumaa et al. (2010)SpeciespH standard errorWet massDominant male paternity standard errorCalculated using CO2SYSEvent labelIndividualsCourtshipCarbonate system computation flagstandard lengthFugacity of carbon dioxide (water) at sea surface temperature (wet air)CarbonTreatmentPartial pressure of carbon dioxide water at sea surface temperature wet airFishCarbon dioxideSingle speciesFugacity of carbon dioxide water at sea surface temperature wet airCoast and continental shelf
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