Search results for "Diffusion"

showing 10 items of 1615 documents

Fluctuation Methods To Study Protein Aggregation in Live Cells: Concanavalin A Oligomers Formation

2011

Prefibrillar oligomers of proteins are suspected to be the primary pathogenic agents in several neurodegenerative diseases. A key approach for elucidating the pathogenic mechanisms is to probe the existence of oligomers directly in living cells. In this work, we were able to monitor the process of aggregation of Concanavalin A in live cells. We used number and brightness analysis, two-color cross number and brightness analysis, and Raster image correlation spectroscopy to obtain the number of molecules, aggregation state, and diffusion coefficient as a function of time and cell location. We observed that binding of Concanavalin A to the membrane and the formation of small aggregates paralle…

Time FactorsCell SurvivalCellSpectroscopy Imaging and Other TechniquesBiophysicsProtein aggregationCell morphologyCell membraneDiffusion03 medical and health scienceschemistry.chemical_compoundMice0302 clinical medicineProtein structure2-NaphthylaminemedicineConcanavalin AAnimalsconfocal microscopy super resolution protein aggregation kinetics in live cells amyloid related pathologiesAnnexin A5Protein Structure QuaternaryCell Shape030304 developmental biology0303 health sciencesbiologySpectrum AnalysisCell MembraneFibroblastsEmbryo MammalianCell biologyMembranemedicine.anatomical_structurechemistryConcanavalin Abiology.proteinLaurdan030217 neurology & neurosurgeryFluorescein-5-isothiocyanateLaurates
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Inter-Model Consistency and Complementarity: Learning from ex-vivo Imaging and Electrophysiological Data towards an Integrated Understanding of Cardi…

2011

International audience; Computational models of the heart at various scales and levels of complexity have been independently developed, parameterised and validated using a wide range of experimental data for over four decades. However, despite remarkable progress, the lack of coordinated efforts to compare and combine these computational models has limited their impact on the numerous open questions in cardiac physiology. To address this issue, a comprehensive dataset has previously been made available to the community that contains the cardiac anatomy and fibre orientations from magnetic resonance imaging as well as epicardial transmembrane potentials from optical mapping measured on a per…

Time FactorsComputer scienceSwine[SDV.IB.IMA]Life Sciences [q-bio]/Bioengineering/ImagingBiophysics030204 cardiovascular system & hematologyIn Vitro Techniquescomputer.software_genreModels BiologicalBiophysical PhenomenaPersonalizationMembrane PotentialsDiffusionPurkinje Fibers03 medical and health sciences0302 clinical medicine[INFO.INFO-TS]Computer Science [cs]/Signal and Image ProcessingOptical mappingMaximum a posteriori estimation[INFO.INFO-IM]Computer Science [cs]/Medical ImagingAnimalsMolecular Biology030304 developmental biology0303 health sciencesComputational modelCardiac electrophysiologybusiness.industryBiophysical PhenomenaExperimental dataReproducibility of ResultsHeartMagnetic Resonance Imaging[INFO.INFO-MO]Computer Science [cs]/Modeling and SimulationElectrophysiological PhenomenaSystems IntegrationSystem integrationArtificial intelligenceData miningbusinesscomputerPericardium[SPI.SIGNAL]Engineering Sciences [physics]/Signal and Image processing
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Tracing European Founder Lineages in the Near Eastern mtDNA Pool

2000

Founder analysis is a method for analysis of nonrecombining DNA sequence data, with the aim of identification and dating of migrations into new territory. The method picks out founder sequence types in potential source populations and dates lineage clusters deriving from them in the settlement zone of interest. Here, using mtDNA, we apply the approach to the colonization of Europe, to estimate the proportion of modern lineages whose ancestors arrived during each major phase of settlement. To estimate the Palaeolithic and Neolithic contributions to European mtDNA diversity more accurately than was previously achievable, we have now extended the Near Eastern, European, and northern-Caucasus d…

Time FactorsHaplogroup HLineage (evolution)Extrachromosomal InheritanceBiologyDNA MitochondrialHaplogroupMiddle East03 medical and health sciencesGene FrequencyDemic diffusionGeneticsHumansGenetics(clinical)PhylogenyGenetics (clinical)030304 developmental biologyGenetics0303 health sciences030305 genetics & heredityGenetic VariationGene PoolArticlesHaplogroup L3Emigration and ImmigrationFounder EffectEuropeDatabases as TopicHaplotypesMutagenesisEvolutionary biologyGenealogical DNA testHuman mitochondrial DNA haplogroupFounder effectThe American Journal of Human Genetics
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Mobility determination of lead isotopes in glass for retrospective radon measurements

2008

In retrospective radon measurements, the 22-y half life of (210)Pb is used as an advantage. (210)Pb is often considered to be relatively immobile in glass after alpha recoil implanted by (222)Rn progenies. The diffusion of (210)Pb could, however, lead to uncertain wrong retrospective radon exposure estimations if (210)Pb is mobile and can escape from glass, or lost as a result of cleaning-induced surface modification. This diffusion was studied by a radiotracer technique, where (209)Pb was used as a tracer in a glass matrix for which the elemental composition is known. Using the ion guide isotope separator on-line technique, the (209)Pb atoms were implanted into the glass with an energy of …

Time FactorsMaterials scienceAnnealing (metallurgy)DetergentsEnthalpyAnalytical chemistrychemistry.chemical_elementRadonIonDiffusionNuclear physicssymbols.namesakeRecoilRadiology Nuclear Medicine and imagingLead RadioisotopesRadiometryArrhenius equationModels StatisticalRadiationRadiological and Ultrasound TechnologyIsotopeTemperaturePublic Health Environmental and Occupational HealthLead RadioisotopesGeneral MedicineCyclotronschemistryRadonsymbolsGlassRadiation Protection Dosimetry
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Study of the dynamics of biomolecules by high speed atomic force microscopy and surface enhanced Raman spectroscopy

2015

This thesis focuses on the coupling of High–Speed Atomic Force Microscopy (HS-AFM) and Surface Enhanced Raman Spectroscopy (SERS) for biomolecule analysis. We have designed a fabrication protocol to manufacture “SERS-active” substrates. The efficacy of gold, silver and gold-silver bimetallic crystalline nanoparticle substrates were evaluated. We have investigated the impact of optical and morphological features of the substrates on Raman signal intensity by analyzing well-known samples such as bipyridine ethylene and methylene blue molecules. We took an interest in three distinct biological problematics with HS-AFM and SERS analyses. First, we have detected the chemical signature of cytochr…

Tip–Enhanced Raman Spectroscopy (TERS)Surface Enhanced Raman Spectroscopy (SERS)CellsProteinsDetergent resistant membrane domains (DRMs)ProtéinesSpectroscopie Raman exaltée de surface (SERS)Nanoparticle substratesNoroviruses (NoVs)Substrats de nanoparticulesHigh–Speed Atomic Force Microscopy (HS-AFM)Microscopie à force atomique haute-vitesse (HS-AFM)Diffusion Raman exaltée par effet de pointe (TERS)Détergent résistant membrane domaines (DRMs)Plasmons de Surface Localisé (LSP)Cellules[PHYS.PHYS] Physics [physics]/Physics [physics]Localized Surface Plasmons (LSP)
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Lévy flights in confining potentials.

2009

We analyze confining mechanisms for L\'{e}vy flights. When they evolve in suitable external potentials their variance may exist and show signatures of a superdiffusive transport. Two classes of stochastic jump - type processes are considered: those driven by Langevin equation with L\'{e}vy noise and those, named by us topological L\'{e}vy processes (occurring in systems with topological complexity like folded polymers or complex networks and generically in inhomogeneous media), whose Langevin representation is unknown and possibly nonexistent. Our major finding is that both above classes of processes stay in affinity and may share common stationary (eventually asymptotic) probability densit…

Topological complexityStochastic ProcessesStationary distributionStatistical Mechanics (cond-mat.stat-mech)Stochastic processProbability (math.PR)FOS: Physical sciencesMathematical Physics (math-ph)Complex networkModels TheoreticalLévy processLangevin equationDiffusionClassical mechanicsLévy flightFOS: MathematicsStatistical physicsCondensed Matter - Statistical MechanicsMathematical PhysicsMathematics - ProbabilityBrownian motionMathematicsPhysical review. E, Statistical, nonlinear, and soft matter physics
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Diffusion of oxygen in cork.

2012

International audience; This work reports measurements of effective oxygen diffusion coefficient in raw cork. Kinetics of oxygen transfer through cork is studied at 298 K thanks to a homemade manometric device composed of two gas compartments separated by a cork wafer sample. The first compartment contains oxygen, whereas the second one is kept under dynamic vacuum. The pressure decrease in the first compartment is recorded as a function of time. The effective diffusion coefficient D-eff is obtained by applying Fick's law to transient state using a numerical method based on finite differences. An analytical model derived from Fick's law applied to steady state is also proposed. Results give…

Transient stateWork (thermodynamics)DiffusionAnalytical chemistryWineCorkengineering.material01 natural sciencesINGRESSPermeabilityDiffusion0404 agricultural biotechnologyMass transferEffective diffusion coefficientWaferNONDESTRUCTIVE COLORIMETRIC METHODDIFFERENT CLOSURESSteady stateChemistry010401 analytical chemistryBOTTLESFood Packaging04 agricultural and veterinary sciencesGeneral ChemistryODORANTSModels Theoretical040401 food science0104 chemical sciencesOxygenKineticsengineeringWHITE WINESGeneral Agricultural and Biological SciencesJournal of agricultural and food chemistry
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Translational diffusion coefficients of volatile compounds in various aqueous solutions at low and subzero temperatures.

2005

International audience; Translational diffusion coefficients (D(12)) of volatile compounds were measured in model media with the profile concentration method. The influence of sample temperature (from 25 to -10 degrees C) was studied on translational diffusion in sucrose or maltodextrin solutions at various concentrations. Results show that diffusivity of volatile compounds in sucrose solutions is controlled by temperature, molecule size, and the viscosity of the liquid phase as expected with the Stokes-Einstein equation; moreover, physicochemical interactions between volatile compounds and the medium are determinant for diffusion estimation. At negative temperature, the winding path induce…

Translational diffusionSucroseChemical PhenomenaDiffusionInteractionsAnalytical chemistry02 engineering and technologyThermal diffusivityDiffusionViscositychemistry.chemical_compound[SPI]Engineering Sciences [physics]0404 agricultural biotechnologyPolysaccharidesFreezingMoleculeNegative temperatureAqueous solutionIce crystalsChemistry PhysicalIcetemperatureWater04 agricultural and veterinary sciencesGeneral Chemistry021001 nanoscience & nanotechnologyMaltodextrin040401 food scienceCold TemperatureSolutionschemistry13. Climate actionOdorantsVolatile compoundsPhysical chemistryVolatilization0210 nano-technologyGeneral Agricultural and Biological SciencesJournal of agricultural and food chemistry
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P1082COMPARISON OF THE REMOVAL OF PROTEIN-BOUND TOXINS AND LARGE MIDDLE MOLECULES WITH HIGH-FLUX PMMA AND MEDIUM CUT-OFF DIALYZERS

2020

Abstract Background and Aims Dialytic clearance of protein-bound toxins and large middle molecules is poor by diffusive treatment and limited by high-flux hemodialysis (HD) and on-line hemodiafiltration (OL-HDF), and only a few studies have examined how to improve their removal by other extracorporeal strategies. Since 2017, there is a new generation of polymethyl methacrylate (PMMA) membranes that suppress platelet adhesion on the membrane surface improving hemocompatibility and permeability, while also maintaining adsorption properties related to conventional PMMA membranes. Expanded HD (HDx) with medium cut-off (MCO) membranes has also recently been incorporated into clinical practice an…

Transplantationbusiness.industryDiffusionUltrafiltrationTissue membraneHigh fluxAdsorptionChemical engineeringNephrologyPermeability (electromagnetism)MoleculeMedicinebusinessClearanceNephrology Dialysis Transplantation
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The relationship between genetic risk variants with brain structure and function in bipolar disorder: A systematic review of genetic-neuroimaging stu…

2017

Genetic-neuroimaging paradigms could provide insights regarding the pathophysiology of bipolar disorder (BD). Nevertheless, findings have been inconsistent across studies. A systematic review of gene-imaging studies involving individuals with BD was conducted across electronic major databases from inception until January 9th, 2017. Forty-four studies met eligibility criteria (N = 2122 BD participants). Twenty-six gene variants were investigated across candidate gene studies and 4 studies used a genome-wide association approach. Replicated evidence (i.e. in >2 studies) suggests that individuals with BD carrying the BDNF Val66Met risk allele could have reduced hippocampal volumes compared …

Transtorno BipolarCandidate genediffusion tensor imagingvoxel based morphometryBipolar disorderBipolar disorder Genetic polymorphisms Neuroimaging Magnetic resonance imaging Functional MRI Diffusion tensor imagingvoxel based morphometryCognitive NeuroscienceBrain Structure and FunctionGenome-wide association studyNeuroimagingComputational biologyGenetic polymorphismsFaculty of Social Sciences03 medical and health sciencesDISC1Behavioral Neuroscience0302 clinical medicineMagnetic resonance imagingNeuroimaginggenetic polymorphisms/dk/atira/pure/core/keywords/FacultyOfSocialSciencesImatges per ressonància magnèticamedicineHumansManic-depressive illnessANK3Bipolar disorderCervellNeuroimagemDiffusion tensor imagingvoxel based morphometryFunctional MRIGenetic polymorphismneuroimagingTrastorn bipolarbiologyBipolar disorder; Diffusion tensor imagingvoxel based morphometry; Functional MRI; Genetic polymorphisms; Magnetic resonance imaging; Neuroimaging; Neuropsychology and Physiological Psychology; Cognitive Neuroscience; Behavioral NeuroscienceReproducibility of ResultsBrainmedicine.disease030227 psychiatryNeuropsychology and Physiological Psychology5-HTTLPRbiology.proteinfunctional MRIImagem por Ressonância MagnéticaPsychologyNeuroscience030217 neurology & neurosurgeryHumanGenome-Wide Association Study
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