Search results for "Forma"

showing 10 items of 34540 documents

Do small protected habitat patches within boreal production forests provide value for biodiversity conservation? : A systematic review protocol

2019

Background Forest harvesting is the main driver of habitat degradation and biodiversity loss in forests of the boreal zone. To mitigate harmful effects, small-scale habitats with high biodiversity values have been protected within production forests. These include woodland key habitats, and other small-scale habitat patches protected by voluntary conservation action. This article describes a protocol for a systematic review to synthesize the value of small habitat patches left within production landscapes for biodiversity. The topic for this systematic review arose from a discussion with the Finnish forestry sector and was further defined in a stakeholder workshop. Research question: Do sma…

0106 biological sciences010504 meteorology & atmospheric scienceshakkuutDIVERSITYBiodiversityINVENTORYWoodland01 natural sciencesloggingvoluntary conservationAbundanceAREASspecies richnesswoodland key habitatsWoodland key habitatslcsh:Environmental sciencessystemaattiset kirjallisuuskatsauksetSpecies diversitylcsh:GE1-3504112 ForestryabundanceEcologyForest harvestingLoggingEnvironmental resource managementLoggingretention forestryPollutionImpactGeographyHabitatimpactTREESforest harvestingVoluntary conservationForest managementManagement Monitoring Policy and Law010603 evolutionary biologymetsätaloussuojelualueet1172 Environmental sciences0105 earth and related environmental sciencesspecies diversitybusiness.industryPERFORMANCE15. Life on landluonnon monimuotoisuusbiodiversiteettiHabitat destructionBorealSpecies richnessbusinessSpecies richness
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Forest multifunctionality is not resilient to intensive forestry

2021

AbstractThere is ample evidence that intensive management of ecosystems causes declines in biodiversity as well as in multiple ecosystem services, i.e., in multifunctionality. However, less is known about the permanence and reversibility of these responses. To gain insight into whether multifunctionality can be sustained under intensive management, we developed a framework building on the concept of resilience: a system’s ability to avoid displacement and to return or transform to a desired state. We applied it to test the ability of forest multifunctionality to persist during and recover from intensive management for timber production in a boreal forest. Using forest growth simulations and…

0106 biological sciences010504 meteorology & atmospheric sciencesmedia_common.quotation_subjectBiodiversityPlant Science010603 evolutionary biology01 natural scienceskestävä metsätalousEcosystem servicestransformation capacityProduction (economics)EcosystemBoreal forestFinland0105 earth and related environmental sciencesmedia_commonbiodiversityresilienssimonikäyttöForest SciencemetsänkäsittelyForestryForestry15. Life on landsustainable forest managementbiodiversiteettitehometsätalousboreaalinen vyöhykeekosysteemipalvelutSustainabilityEcosystem managementBusinessPsychological resilienceecosystem servicesIntensive management
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Middle Jurassic tracks of sauropod dinosaurs in a deep karst cave in France.

2019

14 pages; International audience; Although the deep galleries of natural underground cavities are difficult to access and are sometimes dangerous, they have the potential to preserve trace fossils. Here, we report on the first occurrence of sauropod dinosaur tracks inside a karstic cave. Three trackways are preserved on the roof of the Castelbouc cave 500 m under the surface of the Causse Méjean plateau, southern France. The tracks are Bathonian in age (ca. 168–166 Ma), a crucial but still poorly known time interval in sauropod evolution. The three trackways yield sauropod tracks that are up to 1.25 m long and are therefore amongst the largest known dinosaur footprints worldwide. The trackm…

0106 biological sciences010506 paleontologyBAGA FORMATIONTrace fossilSOUTHERN FRANCE010603 evolutionary biology01 natural sciencesNatural (archaeology)Sedimentary depositional environmentPaleontology0105 earth and related environmental sciencesBASINgeographygeography.geographical_feature_categoryPaleontologyTrackwayKarstEVOLUTIONMOUNTAINSGRANDS-CAUSSES[SDU.STU.PG]Sciences of the Universe [physics]/Earth Sciences/PaleontologyFOOTPRINTSPENINSULAGeologyICHNOFAUNABORNHOLM
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Imidazolium Based Ionic Liquids: A Promising Green Solvent for Water Hyacinth Biomass Deconstruction.

2018

Water hyacinth (WH) is a troublesome aquatic weed of natural and artificial water bodies of India and other tropical countries and causing severe ecological problems. The WH biomass is low in lignin content and contains high amount of cellulose and hemicellulose, making it suitable material for conversion into liquid fuels for energy production. This study highlighted that, how different imidazolium based ionic liquids (ILs) [1-alkyl-3-methylimidazolium bromide, [Cnmim]Br (n = 2, 4, 6, 8, and 10)] with tunable properties can be employed for the degradation of WH biomass. Different characterizations techniques, such as XRD, FT-IR, SEM, and DSC are used to unravel the interplay between ILs an…

0106 biological sciences020209 energyLignocellulosic biomassBiomass02 engineering and technology01 natural scienceslcsh:Chemistryionic liquidschemistry.chemical_compoundHydrolysisBromide010608 biotechnology0202 electrical engineering electronic engineering information engineeringLigninHemicelluloseCelluloselignocellulosic biomassOriginal ResearchGeneral Chemistrypretreatmentcrystallinity indexChemistrylcsh:QD1-999chemistryhydrolysisIonic liquidwater hyacinthNuclear chemistryFrontiers in chemistry
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Interaction Capabilities of a Robotic Receptionist

2017

A system aimed at facilitating the interaction between a human user and an humanoid robot is presented. The system is suited to answer questions about laboratories activities, people involved, projects, research themes and collaborations among employees. The task is accomplished by the HermiT reasoner invoked by a speech recognition module. The system is capable of navigating a specific ontology making inference on it. The presented system is part of a broader social robot framework whose goal is to give the user a fulfilling social interaction experience, driven by the perception of the robot internal state and involving intuitive and computational creativity capabilities.

0106 biological sciences0209 industrial biotechnologySocial robotComputational creativityComputer sciencechatbot02 engineering and technologySemantic reasonerOntology (information science)01 natural sciencesHuman–robot interactionTask (project management)020901 industrial engineering & automationHuman–computer interactionsocial roboticsRobotHumanoid robot010606 plant biology & botany
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Recombinant laccase from Pediococcus acidilactici CECT 5930 with ability to degrade tyramine

2017

Biogenic amines degradation by bacterial laccases is little known, so we have cloned and heterologously expressed, in E. coli, a new laccase from Pediococcus acidilactici CECT 5930 (Lpa5930), a lactic acid bacterium commonly found in foods able to degrade tyramine. The recombinant enzyme has been characterized by physical and biochemical assays. Here we report the optimization of expression and purification procedures of this laccase. DNA encoding sequence of laccase from P. acidilactici was amplified by PCR and cloned into the expression plasmid pET28a for induction by isopropyl-β-D-thiogalactoipyranoside. Protein expression was performed in E. coli BL21(DE3) harboring pGro7 plasmid expres…

0106 biological sciences0301 basic medicineArabinoseMolecular biologylcsh:MedicineLaccasesBiochemistryBiotecnologia01 natural sciencesSubstrate Specificitylaw.inventionDatabase and Informatics Methodschemistry.chemical_compoundlawRecombinant Protein PurificationCloning MolecularAmineslcsh:Sciencechemistry.chemical_classificationMultidisciplinaryABTSbiologyOrganic CompoundsTemperatureHydrogen-Ion ConcentrationTyramineRecombinant ProteinsEnzymesChemistryRecombination-Based AssayBiochemistryPhysical SciencesRecombinant DNAElectrophoresis Polyacrylamide GelOxidation-ReductionSequence AnalysisResearch ArticleProtein PurificationBioinformaticsTyramineLibrary ScreeningDNA constructionResearch and Analysis Methods03 medical and health sciencesBacterial ProteinsSequence Motif Analysis010608 biotechnologyAmino Acid SequenceBenzothiazolesPediococcus acidilacticiLaccaseMolecular Biology Assays and Analysis TechniquesBase SequenceMolecular massLaccaseOrganic Chemistrylcsh:RChemical CompoundsBiology and Life SciencesProteinsPediococcus acidilacticiSequence Analysis DNAbiology.organism_classificationMolecular biology techniques030104 developmental biologyEnzymechemistryPlasmid ConstructionEnzymologySpectrophotometry Ultravioletlcsh:QSulfonic AcidsEnzimsProteïnesPurification TechniquesPLOS ONE
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Chloroplast genomes of Rubiaceae: Comparative genomics and molecular phylogeny in subfamily Ixoroideae.

2020

In Rubiaceae phylogenetics, the number of markers often proved a limitation with authors failing to provide well-supported trees at tribal and generic levels. A robust phylogeny is a prerequisite to study the evolutionary patterns of traits at different taxonomic levels. Advances in next-generation sequencing technologies have revolutionized biology by providing, at reduced cost, huge amounts of data for an increased number of species. Due to their highly conserved structure, generally recombination-free, and mostly uniparental inheritance, chloroplast DNA sequences have long been used as choice markers for plant phylogeny reconstruction. The main objectives of this study are: 1) to gain in…

0106 biological sciences0301 basic medicineChloroplastsPlant GenomesCoffeaRubiaceaePlant SciencePlant Genetics01 natural sciencesGenomePlant GenomicsPlastidsGenome EvolutionPhylogenyData ManagementMultidisciplinaryIxoroideaeQDNA ChloroplastRHigh-Throughput Nucleotide Sequencingfood and beveragesPhylogenetic AnalysisGenomicsPhylogeneticsChloroplast DNAEngineering and TechnologyMedicineGenome PlantResearch ArticleBiotechnologyGenome evolutionComputer and Information SciencesNuclear genePlant Cell BiologyScienceGenomicsBioengineeringBiology010603 evolutionary biologyPolymorphism Single NucleotideMolecular EvolutionEvolution Molecular03 medical and health sciencesChloroplast GenomeGeneticsEvolutionary SystematicsGenome ChloroplastTaxonomyComparative genomicsEvolutionary BiologyBiology and Life SciencesComputational BiologyCell BiologySequence Analysis DNAComparative Genomicsbiology.organism_classificationGenome AnalysisGenomic Libraries030104 developmental biologyEvolutionary biologyPlant BiotechnologyReference genomePLoS ONE
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Evaluation of chloroplast genome annotation tools and application to analysis of the evolution of coffee species.

2018

International audience; Chloroplast sequences are widely used for phylogenetic analysis due to their high degree of conservation in plants. Whole chloroplast genomes can now be readily obtained for plant species using new sequencing methods, giving invaluable data for plant evolution However new annotation methods are required for the efficient analysis of this data to deliver high quality phylogenetic analyses. In this study, the two main tools for chloroplast genome annotation were compared. More consistent detection and annotation of genes were produced with GeSeq when compared to the currently used Dogma. This suggests that the annotation of most of the previously annotated chloroplast …

0106 biological sciences0301 basic medicineChloroplastsPlant GenomesPlant SciencePlant Genetics01 natural sciencesGenomeCoffeeDatabase and Informatics MethodsPlant GenomicsPlastidsPhylogenyData Management2. Zero hungerPlant evolutionMultidisciplinarybiologyPhylogenetic treeQRfood and beveragesPhylogenetic AnalysisGenome projectGenomicsPhylogenetics[INFO.INFO-MA]Computer Science [cs]/Multiagent Systems [cs.MA]MedicineEngineering and Technology[INFO.INFO-DC]Computer Science [cs]/Distributed Parallel and Cluster Computing [cs.DC]Cellular Structures and OrganellesCellular TypesSequence AnalysisResearch ArticleBiotechnologyComputer and Information SciencesBioinformaticsSciencePlant Cell BiologyBioengineering[INFO.INFO-SE]Computer Science [cs]/Software Engineering [cs.SE]Coffea canephoraGenes PlantResearch and Analysis Methods010603 evolutionary biology[INFO.INFO-IU]Computer Science [cs]/Ubiquitous ComputingEvolution Molecular[INFO.INFO-CR]Computer Science [cs]/Cryptography and Security [cs.CR]03 medical and health sciencesPhylogeneticsChloroplast GenomePlant CellsGeneticsEvolutionary SystematicsGenome ChloroplastTaxonomyEvolutionary BiologyCoffea arabicaCoffeafungiBiology and Life SciencesComputational BiologyMolecular Sequence AnnotationSequence Analysis DNACell Biology15. Life on landbiology.organism_classificationGenome Analysis[INFO.INFO-MO]Computer Science [cs]/Modeling and SimulationGenome Annotation030104 developmental biologyEvolutionary biology[INFO.INFO-ET]Computer Science [cs]/Emerging Technologies [cs.ET]Plant BiotechnologySequence AlignmentPloS one
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Microspore Embryogenesis Through Anther Culture in Citrus clementina Hort. ex Tan.

2016

Anther culture is a biotechnological method that allows to obtain, in one step, homozygous plants, very important to plant breeding, due to their numerous applications in mutation research, selection, genome sequencing, genetic analysis, and transformation. To induce the microspores, i.e., the immature male gametes, to switch from the normal gametophytic pathway to the sporophytic one, it is necessary to submit them to a type of stress, such as high or low temperature, starvation, or magnetic field. Stress can be applied to the donor plants and/or the fl oral buds or the anthers or the isolated microspores, before or during the culture. In this chapter, the protocol to induce gametic embryo…

0106 biological sciences0301 basic medicineClementineAnther cultureCitruStamenMicrospore embryogenesiPlant DevelopmentGerminationBreedingHaploidyBiologymedicine.disease_cause01 natural sciencesGenetic analysis03 medical and health sciencesMicrosporePollenBotanyGeneticsmedicinePlant breedingCultivarMolecular BiologyPlant Somatic Embryogenesis TechniqueSomatic embryogenesifungiEmbryogenesisGametic embryogenesifood and beveragesSettore AGR/03 - Arboricoltura Generale E Coltivazioni ArboreeTransformation (genetics)030104 developmental biologyIsolated microspore cultureDoubled haploidPollenTissue Culture TechniqueGenome Plant010606 plant biology & botany
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Comparative Mitogenomics of Leeches (Annelida: Clitellata): Genome Conservation and Placobdella-Specific trnD Gene Duplication.

2015

Mitochondrial DNA sequences, often in combination with nuclear markers and morphological data, are frequently used to unravel the phylogenetic relationships, population dynamics and biogeographic histories of a plethora of organisms. The information provided by examining complete mitochondrial genomes also enables investigation of other evolutionary events such as gene rearrangements, gene duplication and gene loss. Despite efforts to generate information to represent most of the currently recognized groups, some taxa are underrepresented in mitochondrial genomic databases. One such group is leeches (Annelida: Hirudinea: Clitellata). Herein, we expand our knowledge concerning leech mitochon…

0106 biological sciences0301 basic medicineClitellatalcsh:MedicineBiochemistry01 natural sciencesGenomeDatabase and Informatics MethodsRNA TransferGene DuplicationGene OrderInvertebrate GenomicsGene duplicationAnnelidslcsh:SciencePhylogenyEnergy-Producing OrganellesData ManagementGeneticseducation.field_of_studyMultidisciplinaryPhylogenetic treePhylogenetic AnalysisGenomicsGenomic DatabasesMitochondriaNucleic acidsPhylogeneticsGenes MitochondrialPlacobdella parasiticaCellular Structures and OrganellesTransfer RNAResearch ArticleComputer and Information SciencesMitochondrial DNAPopulationBioenergeticsBiologyResearch and Analysis Methods010603 evolutionary biologyEvolution MolecularOpen Reading Frames03 medical and health sciencesPhylogeneticsLeechesGeneticsAnimalsEvolutionary Systematics14. Life underwaterCodonMolecular Biology TechniquesNon-coding RNAeducationMolecular BiologyTaxonomyMolecular Biology Assays and Analysis TechniquesEvolutionary Biologylcsh:ROrganismsBiology and Life SciencesComputational BiologyCell BiologyGenome Analysisbiology.organism_classificationInvertebratesBiological Databases030104 developmental biologyAnimal GenomicsGenome MitochondrialRNAlcsh:QPLoS ONE
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