Search results for "ITS"

showing 10 items of 4946 documents

Analysis of Microstructure of the Cardiac Conduction System Based on Three-Dimensional Confocal Microscopy

2016

The specialised conducting tissues present in the ventricles are responsible for the fast distribution of the electrical impulse from the atrio-ventricular node to regions in the subendocardial myocardium. Characterisation of anatomical features of the specialised conducting tissues in the ventricles is highly challenging, in particular its most distal section, which is connected to the working myocardium via Purkinje-myocardial junctions. The goal of this work is to characterise the architecture of the distal section of the Purkinje network by differentiating Purkinje cells from surrounding tissue, performing a segmentation of Purkinje fibres at cellular scale, and mathematically describin…

0301 basic medicineConfocal Microscopylcsh:Medicine030204 cardiovascular system & hematologylaw.inventionPurkinje Cells0302 clinical medicineAnimal CellslawMedicine and Health SciencesMyocyteSegmentationlcsh:ScienceMammalsMicroscopyMicroscopy ConfocalMultidisciplinaryLight MicroscopyHeartAnimal ModelsAnatomyVertebratesRabbitsCellular TypesAnatomyElectrical conduction system of the heartNetwork AnalysisResearch ArticleComputer and Information SciencesCell typeCardiac VentriclesHeart VentriclesMuscle TissueBiologyResearch and Analysis MethodsImaging data03 medical and health sciencesImaging Three-DimensionalModel OrganismsHeart Conduction SystemConfocal microscopyAnimalsComplex network analysisMuscle CellsMyocardiumlcsh:ROrganismsBiology and Life SciencesCell BiologyWheat germ agglutininBiological Tissue030104 developmental biologyAmniotesCardiovascular Anatomylcsh:QEndocardiumBiomedical engineeringPLOS ONE
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Parallel Pairwise Epistasis Detection on Heterogeneous Computing Architectures

2016

This is a post-peer-review, pre-copyedit version of an article published in IEEE Transactions on Parallel and Distributed Systems. The final authenticated version is available online at: http://dx.doi.org/10.1109/TPDS.2015.2460247. [Abstract] Development of new methods to detect pairwise epistasis, such as SNP-SNP interactions, in Genome-Wide Association Studies is an important task in bioinformatics as they can help to explain genetic influences on diseases. As these studies are time consuming operations, some tools exploit the characteristics of different hardware accelerators (such as GPUs and Xeon Phi coprocessors) to reduce the runtime. Nevertheless, all these approaches are not able t…

0301 basic medicineCoprocessorComputer science0206 medical engineeringAccelerationData modelsSymmetric multiprocessor systemComputational modeling02 engineering and technologyParallel computingSupercomputer03 medical and health sciencesTask (computing)030104 developmental biologyCoprocessorsComputational Theory and MathematicsHardware and ArchitectureSignal ProcessingGeneticsPairwise comparisonComputer architectureGraphics processing units020602 bioinformaticsXeon Phi
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On a Planar Dynamical System Arising in the Network Control Theory

2016

We study the structure of attractors in the two-dimensional dynamical system that appears in the network control theory. We provide description of the attracting set and follow changes this set suffers under the changes of positive parameters µ and Θ.

0301 basic medicineDynamical systems theoryPhase portraitattractor selection020206 networking & telecommunicationsphase portraits02 engineering and technologyDynamical systemnetworks controldynamical systemLinear dynamical system03 medical and health sciences030104 developmental biologyProjected dynamical systemControl theoryModeling and SimulationAttractor0202 electrical engineering electronic engineering information engineeringQA1-939Statistical physicsLimit setRandom dynamical systemAnalysisMathematicsMathematicsMathematical Modelling and Analysis
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Inferring causation from time series in earth system sciences

2019

The heart of the scientific enterprise is a rational effort to understand the causes behind the phenomena we observe. In large-scale complex dynamical systems such as the Earth system, real experiments are rarely feasible. However, a rapidly increasing amount of observational and simulated data opens up the use of novel data-driven causal methods beyond the commonly adopted correlation techniques. Here, we give an overview of causal inference frameworks and identify promising generic application cases common in Earth system sciences and beyond. We discuss challenges and initiate the benchmark platform causeme.net to close the gap between method users and developers.

0301 basic medicineEarth scienceAquatic Ecology and Water Quality ManagementDynamical systems theoryComputer science530 PhysicsDatenmanagement und AnalyseSciencereviewGeneral Physics and Astronomyheart02 engineering and technologyGeneral Biochemistry Genetics and Molecular Biology03 medical and health sciencesDatabasesLife ScienceCausationStatistical physics thermodynamics and nonlinear dynamicsintermethod comparisonlcsh:Scienceresearch workScientific enterpriseMultidisciplinaryWIMEKSeries (mathematics)QComputational sciencefeasibility study500General ChemistryAquatische Ecologie en Waterkwaliteitsbeheersimulation021001 nanoscience & nanotechnologyData sciencecausal inference climateEarth system scienceEnvironmental sciences030104 developmental biologytime series analysisCausal inferencePerspectiveBenchmark (computing)Observational studylcsh:Qconceptual frameworkdata management0210 nano-technologyClimate sciences
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T cells mediate autoantibody-induced cutaneous inflammation and blistering in epidermolysis bullosa acquisita

2016

AbstractT cells are key players in autoimmune diseases by supporting the production of autoantibodies. However, their contribution to the effector phase of antibody-mediated autoimmune dermatoses, i.e., tissue injury and inflammation of the skin, has not been investigated. In this paper, we demonstrate that T cells amplify the development of autoantibody-induced tissue injury in a prototypical, organ-specific autoimmune disease, namely epidermolysis bullosa acquisita (EBA) – characterized and caused by autoantibodies targeting type VII collagen. Specifically, we show that immune complex (IC)-induced inflammation depends on the presence of T cells – a process facilitated by T cell receptor (…

0301 basic medicineEpidermolysis bullosa acquisitamedicine.medical_specialtyCollagen Type VIINeutrophilsT-LymphocytesGene ExpressionMice NudeInflammationAntigen-Antibody ComplexCell CommunicationEpidermolysis Bullosa AcquisitaArticleMice03 medical and health sciencesCricetulus0302 clinical medicinemedicineAnimalsHumansAutoantibodiesSkinAutoimmune diseaseMice Inbred BALB CMultidisciplinarybusiness.industryT-cell receptorAutoantibodyAntibodies MonoclonalReceptors Antigen T-Cell gamma-deltamedicine.diseaseNatural killer T cellDermatologyImmune complexMice Inbred C57BLDisease Models Animal030104 developmental biologyLymphatic systemImmunoglobulin GImmunologyNatural Killer T-CellsLymph NodesRabbitsmedicine.symptombusinessSpleenSignal Transduction030215 immunologyScientific Reports
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Comparison of hemolytic activity of the intermediate subunit of Entamoeba histolytica and Entamoeba dispar lectins.

2017

Galactose and N-acetyl-D-galactosamine-inhibitable lectin of Entamoeba histolytica has roles in pathogenicity and induction of protective immunity in rodent models of amoebiasis. Recently, the intermediate subunit of the lectin, Igl1, of E. histolytica has been shown to have hemolytic activity. However, the corresponding lectin is also expressed in a non-virulent species, Entamoeba dispar, and another subunit, Igl2, is expressed in the protozoa. Therefore, in this study, we compared the activities of Igl1 and Igl2 subunits from E. histolytica and E. dispar using various regions of recombinant Igl proteins expressed in Escherichia coli. The recombinant E. dispar Igl proteins had comparable h…

0301 basic medicineErythrocytesTime Factorslcsh:MedicineProtein Sequencingmedicine.disease_causePathology and Laboratory MedicineBiochemistrylaw.inventionEntamoebafluids and secretionslawLectinsMedicine and Health SciencesRecombinant Protein Purificationlcsh:ScienceProtozoansMultidisciplinarybiologyPseudomonas AeruginosaRecombinant ProteinsBacterial PathogensMedical MicrobiologyRecombinant DNAPathogensResearch ArticleProtein PurificationProtein subunitDisparResearch and Analysis MethodsReal-Time Polymerase Chain ReactionMicrobiologyHemolysisMicrobiologyEntamoeba Histolytica03 medical and health sciencesEntamoeba histolyticaPseudomonasParasite Groupsparasitic diseasesmedicineAnimalsTrophozoitesHemoglobinGene SilencingHorsesMolecular Biology TechniquesSequencing TechniquesEscherichia coliMolecular BiologyMicrobial PathogensBacterialcsh:REntamoebaOrganismsLectinBiology and Life SciencesProteinsbiology.organism_classificationParasitic Protozoansdigestive system diseasesProtein Subunits030104 developmental biologybiology.proteinProtozoaParasitologylcsh:QApicomplexaPurification TechniquesPLoS ONE
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Are the Myokines the Mediators of Physical Activity-Induced Health Benefits?

2016

BACKGROUND: The concept of the muscle as a secretory organ, developed during the last decades, partially answers to the issue of how the crosstalk between skeletal muscle and distant tissues happens. The beneficial effects of exercise transcend the simple improved skeletal muscle functionality: systemic responses to exercise have been observed in distal organs like heart, kidney, brain and liver. Increasing data have accumulated regarding the synthesis, the kinetics of release and the biological roles of muscular cytokines, now called myokines. The most recent techniques have meaningfully improved the identification of the muscle cell secretome, but several issues regarding the extent of se…

0301 basic medicineFGF21Physical activityMuscle ProteinsMyostatinHealth benefitsBioinformatics03 medical and health sciencesMyokineDrug DiscoveryMyokinemedicineMyocyteHumansMuscle SkeletalExercisePharmacologybiologySkeletal muscle030104 developmental biologymedicine.anatomical_structureImmunologybiology.proteinCytokinesmedicine.symptomMuscle contraction
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Fibrinogen Gamma Chain Promotes Aggregation of Vesicular Stomatitis Virus in Saliva.

2020

This article belongs to the Section Animal Viruses.

0301 basic medicineFibrinogen-gamma chainVirologiaSalivaVirion aggregationviruses030106 microbiologyCelllcsh:QR1-502Fluorescent Antibody TechniqueViral transmissionProteomicsFibrinogenlcsh:MicrobiologyVesicular stomatitis Indiana virusArticleCell Line03 medical and health sciencesLabel-free proteomicsDownregulation and upregulationlabel-free proteomicsVirologymedicineHumansCollective infectious unitscollective infectious unitsSalivaCells CulturedbiologyChemistryviral transmissionVirionFibrinogenRNA virusbiology.organism_classificationVirus3. Good healthCell biologystomatognathic diseases030104 developmental biologyInfectious Diseasesmedicine.anatomical_structureVesicular stomatitis virusVesicular stomatitis virusvirion aggregationvesicular stomatitis virusVesicular Stomatitismedicine.drugViruses
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Ancient goat genomes reveal mosaic domestication in the Fertile Crescent

2018

How humans got their goatsLittle is known regarding the location and mode of the early domestication of animals such as goats for husbandry. To investigate the history of the goat, Dalyet al.sequenced mitochondrial and nuclear sequences from ancient specimens ranging from hundreds to thousands of years in age. Multiple wild populations contributed to the origin of modern goats during the Neolithic. Over time, one mitochondrial type spread and became dominant worldwide. However, at the whole-genome level, modern goat populations are a mix of goats from different sources and provide evidence for a multilocus process of domestication in the Near East. Furthermore, the patterns described suppor…

0301 basic medicineFollistatinMESH: DomesticationAGRICULTURE1103CATTLEMESH: FollistatinMESH: AfricaGenome[SHS]Humanities and Social SciencesDomestication0601 history and archaeologyMESH: AnimalsMESH: Genetic VariationMESH: PhylogenyPhylogenyZAGROSmedia_common2. Zero hunger[SDV.EE]Life Sciences [q-bio]/Ecology environmentGenome1311MultidisciplinaryMiddle East060102 archaeologyMosaicismMESH: AsiaGoats06 humanities and the artsEuropeAnimals DomesticMESH: MosaicismReproductionTRAITSAsia[SHS.ARCHEO]Humanities and Social Sciences/Archaeology and Prehistorymedia_common.quotation_subject1204BiologyDNA MitochondrialMESH: GoatsMosaic03 medical and health sciencesPhylogeneticsGenetic variationAnimalsMESH: GenomeMESH: Animals DomesticDNA AncientDietary change[SDV.BBM.BC]Life Sciences [q-bio]/Biochemistry Molecular Biology/Biochemistry [q-bio.BM]Domestication[SDV.GEN]Life Sciences [q-bio]/GeneticsNEAR-EASTMESH: DNA MitochondrialGenetic VariationMESH: DNA AncientGENEMODEL030104 developmental biologySHEEPEvolutionary biologyORIGINSAfricaMESH: EuropeScience
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Development of novel functional ingredients: Need for testing systems and solutions with Caenorhabditis elegans

2016

Abstract Background Nutrition is increasingly understood as a means of maintaining health and well-being and the market for functional foods keeps growing in double-digits. Functional nutrition is seen by many as the interphase between food and pharmaceuticals. In fact, players from both sides are increasingly making moves in the form of strategic alliances, M&A operations and co-investments which are bringing the two realms closer together. Food regulations to prove safety of novel ingredients or to support health claims are every day more stringent and the general public is also increasingly informed about the science, risks and benefits of what they eat. All this presents a magnificent o…

0301 basic medicineFood industryScope (project management)Cost efficiencybusiness.industryBiologybiology.organism_classificationRigourBiotechnology03 medical and health sciences030104 developmental biologyFunctional foodRisk analysis (engineering)Health claims on food labelsRisks and benefitsbusinessCaenorhabditis elegansFood ScienceBiotechnologyTrends in Food Science & Technology
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