Search results for "MOLECULE"

showing 10 items of 5162 documents

The Chlamydomonas genome reveals the evolution of key animal and plant functions

2007

Chlamydomonas reinhardtii is a unicellular green alga whose lineage diverged from land plants over 1 billion years ago. It is a model system for studying chloroplast-based photosynthesis, as well as the structure, assembly, and function of eukaryotic flagella (cilia), which were inherited from the common ancestor of plants and animals, but lost in land plants. We sequenced the ∼120-megabase nuclear genome of Chlamydomonas and performed comparative phylogenomic analyses, identifying genes encoding uncharacterized proteins that are likely associated with the function and biogenesis of chloroplasts or eukaryotic flagella. Analyses of the Chlamydomonas genome advance our understanding of the a…

0106 biological sciencesMESH: Sequence Analysis DNAMESH: Algal ProteinsChloroplastsProteomeMESH: PlantsChlamydomonas reinhardtii01 natural sciencesGenomeMESH: Membrane Transport ProteinsDNA AlgalMESH: DNA AlgalMESH: AnimalsGoniumPhotosynthesisMESH: PhylogenyMESH: PhotosynthesisPhylogenyGenetics0303 health sciencesGenomeMultidisciplinarybiologyMESH: Genomicsfood and beveragesGenomicsPlantsBiological EvolutionMESH: Genes[SDV.BBM.BC]Life Sciences [q-bio]/Biochemistry Molecular Biology/Biomolecules [q-bio.BM]MESH: ProteomeFlagellaMultigene FamilyMESH: Computational BiologyMESH: Chlamydomonas reinhardtiiNuclear geneMolecular Sequence Data[SDV.BC]Life Sciences [q-bio]/Cellular BiologyFlagellumMESH: FlagellaArticle03 medical and health sciencesIntraflagellar transportMESH: EvolutionAnimalsMESH: Genome[SDV.BBM.BC]Life Sciences [q-bio]/Biochemistry Molecular Biology/Biochemistry [q-bio.BM]Gene[SDV.BC] Life Sciences [q-bio]/Cellular Biology030304 developmental biologyMESH: Molecular Sequence DataMESH: ChloroplastsAlgal ProteinsChlamydomonasComputational BiologyMembrane Transport ProteinsSequence Analysis DNAbiology.organism_classificationGenesMESH: Multigene FamilyChlamydomonas reinhardtii010606 plant biology & botany
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Bacterial rhamnolipids are novel MAMPs conferring resistance to Botrytis cinerea in grapevine

2009

International audience; Rhamnolipids produced by the bacteria Pseudomonas aeruginosa are known as very efficient biosurfactant molecules. They are used for a wide range of industrial applications, especially in food, cosmetics and pharmaceutical formulations as well as in bioremediation of pollutants. In this paper, the role of rhamnolipids as novel molecules triggering defence responses and protection against the fungus Botrytis cinerea in grapevine is presented. The effect of rhamnolipids was assessed in grapevine using cell suspension cultures and vitro-plantlets. Ca2+ influx, mitogen-activated protein kinase activation and reactive oxygen species production form part of early signalling…

0106 biological sciencesPOTENTIATIONPhysiologyPlant ScienceFungusmedicine.disease_cause01 natural sciencesPSEUDOMONAS AERUGINOSAMicrobiologySurface-Active Agents03 medical and health sciencesBioremediationBOTRYTIS CINEREA[CHIM.ANAL]Chemical Sciences/Analytical chemistrySpore germinationmedicineGRAPEVINEVitis[SDV.BBM.BC]Life Sciences [q-bio]/Biochemistry Molecular Biology/Biochemistry [q-bio.BM]Cells CulturedComputingMilieux_MISCELLANEOUS030304 developmental biologyBotrytis cinerea[SDV.EE]Life Sciences [q-bio]/Ecology environment0303 health sciencesbiologyPseudomonas aeruginosa[CHIM.ORGA]Chemical Sciences/Organic chemistryfungiPLANT DEFENCE[SDV.BBM.BM]Life Sciences [q-bio]/Biochemistry Molecular Biology/Molecular biologyRHAMNOLIPIDESpores Fungalbiology.organism_classification[SDV.BBM.BC]Life Sciences [q-bio]/Biochemistry Molecular Biology/Biomolecules [q-bio.BM][SDV.BV.PEP]Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacyRNA PlantCalciumBotrytisMAMPsGlycolipidsMitogen-Activated Protein KinasesReactive Oxygen SpeciesBacteria010606 plant biology & botany
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An early Ca2+ influx is a prerequisite to thaxtomin A-induced cell death in Arabidopsis thaliana cells

2008

International audience; The pathogenicity of various Streptomyces scabies isolates involved in potato scab disease was correlated with the production of thaxtomin A. Since calcium is known as an essential second messenger associated with pathogen-induced plant responses and cell death, it was investigated whether thaxtomin A could induce a Ca 2+ influx related to cell death and to other putative plant responses using Arabidopsis thaliana suspension cells, which is a convenient model to study plant–microbe interactions. A. thaliana cells were treated with micromolar concentrations of thaxto-min A. Cell death was quantified and ion flux variations were analysed from electrophysiological measu…

0106 biological sciencesProgrammed cell death[SDV.BIO]Life Sciences [q-bio]/BiotechnologyPhysiologyCellchemistry.chemical_element[SDV.BC.BC]Life Sciences [q-bio]/Cellular Biology/Subcellular Processes [q-bio.SC]Plant ScienceBiologyCalcium01 natural sciences03 medical and health sciences[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN][SDV.BC.IC]Life Sciences [q-bio]/Cellular Biology/Cell Behavior [q-bio.CB]medicineArabidopsis thaliana[SDV.BBM.BC]Life Sciences [q-bio]/Biochemistry Molecular Biology/Biochemistry [q-bio.BM][SDV.BDD.GAM]Life Sciences [q-bio]/Development Biology/Gametogenesis030304 developmental biology0303 health sciencesVoltage-dependent calcium channelfood and beverages[SDV.BBM.BM]Life Sciences [q-bio]/Biochemistry Molecular Biology/Molecular biology[SDV.BBM.MN]Life Sciences [q-bio]/Biochemistry Molecular Biology/Molecular Networks [q-bio.MN]Streptomyces scabiesbiology.organism_classificationplant pathogenStreptomyces[SDV.BV.PEP]Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacy[SDV.BBM.BC]Life Sciences [q-bio]/Biochemistry Molecular Biology/Biomolecules [q-bio.BM][SDV.BV.AP]Life Sciences [q-bio]/Vegetal Biology/Plant breedingcell deaththaxtomin A[CHIM.POLY]Chemical Sciences/Polymersmedicine.anatomical_structureBiochemistrychemistryion channelSecond messenger systemCalciumSignal transduction010606 plant biology & botanyJournal of Experimental Botany
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NMR structure determination of (11E)-trinervita-1(14),2,11-triene, a new diterpene from sexual glands of termites

2005

Graphical Abstract Full-size image; International audience; Female alates of Nasutitermes ephratae termites from Guadeloupe and Nasutitermes sp. from Brazil produce a diterpene hydrocarbon of the molecular formula C20H30 as the main component of their tergal gland secretion. Analysis of NMR, IR, and mass spectra of the diterpene led to a structure of (11E)-trinervita-1(14),2,11-triene. Based on a comparison with the published oxygenated trinervitane skeleton from termites we prefer the enantiomer with absolute configurations (4R,7S,8R,15S,16S). The suggested structure is supported by ab initio quantum chemical calculation of 1H and 13C chemical shifts for the optimized geometry of the molec…

0106 biological sciencesStereochemistryAb initio1H and 13C010402 general chemistry01 natural sciencesBiochemistry1H-RMN; 13C-RMNTerpene03 medical and health scienceschemistry.chemical_compoundDrug Discovery[SDV.IDA]Life Sciences [q-bio]/Food engineeringNasutitermesOrganic chemistryMoleculeDITERPENE HYDROCARBONPHEROMONE[SPI.GPROC]Engineering Sciences [physics]/Chemical and Process EngineeringGLANDE TERGALE FEMELLEDITERPENIQUE030304 developmental biologyFEMALE TERGAL GLANDchemistry.chemical_classification0303 health sciencesbiology010405 organic chemistryChemical shiftOrganic ChemistryTERMITEGeneral Medicinebiology.organism_classification0104 chemical sciences010602 entomologyHydrocarbonchemistryTRINERVITANEMass spectrumEnantiomerDiterpene
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A microbiological, physicochemical, and texture study during storage of yoghurt produced under isostatic pressure

2019

Abstract This work aimed to study refrigeration storage (4 °C for 23 days) of yoghurt produced at 43 °C under sub-lethal high pressure, at 10, 20, 30 and 40 MPa, in comparison with the fermentation process at atmospheric pressure (0.1 MPa). Lactic acid bacteria (S. thermophilus and L. bulgaricus, LAB) and quality parameters like pH, titratable acidity, syneresis and colour were evaluated, along with textural analyses to infer how pressure would impact the obtained yoghurt along storage. Higher fermentation pressures resulted in slightly lower LAB loads (a maximum of 1.01 Log (CFU/mL)) and increased the fermentation time (a maximum of 3 h 25 min), syneresis (a maximum of 44%), all for 40 MPa…

0106 biological sciences[SDV.BIO]Life Sciences [q-bio]/BiotechnologyStorageTitratable acid01 natural scienceschemistry.chemical_compound0404 agricultural biotechnology010608 biotechnology[SDV.IDA]Life Sciences [q-bio]/Food engineeringFood scienceTexture (crystalline)[SDV.BBM.BC]Life Sciences [q-bio]/Biochemistry Molecular Biology/Biochemistry [q-bio.BM]ComputingMilieux_MISCELLANEOUSSub-lethal stressSyneresisAtmospheric pressurefood and beveragesRefrigeration[SDV.BBM.BM]Life Sciences [q-bio]/Biochemistry Molecular Biology/Molecular biology04 agricultural and veterinary sciences040401 food science[SDV.BBM.BC]Life Sciences [q-bio]/Biochemistry Molecular Biology/Biomolecules [q-bio.BM]Lactic acidHigh pressurechemistryYoghurtHigh pressureFermentation[SDV.AEN]Life Sciences [q-bio]/Food and NutritionLactic fermentationFood ScienceLWT
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Effect of Metal Complexation on the Conductance of Single-Molecular Wires Measured at Room Temperature

2014

The present work aims to give insight into the effect that metal coordination has on the room-temperature conductance of molecular wires. For that purpose, we have designed a family of rigid, highly conductive ligands functionalized with different terminations (acetylthiols, pyridines, and ethynyl groups), in which the conformational changes induced by metal coordination are negligible. The single-molecule conductance features of this series of molecular wires and their corresponding Cu(I) complexes have been measured in break-junction setups at room temperature. Experimental and theoretical data show that no matter the anchoring group, in all cases metal coordination leads to a shift towar…

02 engineering and technology010402 general chemistry01 natural sciencesBiochemistryCatalysissymbols.namesakeMolecular wireColloid and Surface ChemistryComputational chemistryMolecular conductanceMolecular orbitalLigandChemistryFermi levelSingle-MoleculeConductanceFermi energyGeneral Chemistry021001 nanoscience & nanotechnology0104 chemical sciencesChemical physicsConductancesymbolsDensity functional theoryConductance; Single-Molecule; Break JunctionsBreak Junctions0210 nano-technologyJournal of the American Chemical Society
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Vibronic Model for Intercommunication of Localized Spins via Itinerant Electron

2019

In this article, we propose a vibronic pseudo Jahn–Teller model for partially delocalized mixed-valence molecules aimed to describe the magnetic coupling between the localized spins mediated by the delocalized electron. The simplest partially delocalized system that retains the main studied features is assumed to consist of a one-electron mixed-valence dimer, which is connected to the two terminal magnetic ions. The model involves the following key interactions: electron transfer in the spin-delocalized subsystem of a mixed-valence molecule, which is mimicked by a dimeric unit, coupling of the itinerant electrons with the molecular vibrations, and isotropic magnetic exchange between the loc…

02 engineering and technologyElectron010402 general chemistry01 natural sciencesMolecular physicsDelocalized electronElectron transferPhysics::Atomic and Molecular ClustersMoleculePhysics::Chemical PhysicsPhysical and Theoretical ChemistryPhysicsSpinsQuàntums Teoria dels021001 nanoscience & nanotechnologyInductive coupling3. Good health0104 chemical sciencesSurfaces Coatings and FilmsElectronic Optical and Magnetic MaterialsCoupling (physics)General EnergyMolecular vibrationEnergiaCondensed Matter::Strongly Correlated Electrons0210 nano-technologyFisicoquímicaThe Journal of Physical Chemistry C
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Functionalized halloysite nanotubes: Efficient carrier systems for antifungine drugs

2018

Abstract Halloysite-cyclodextrin hybrid was employed as carrier for sustained release of clotrimazole for vaginal or buccal treatment of Candidiasis. The nanocarrier was obtained by functionalization of halloysite surface with cyclodextrin moieties by means of microwave irradiation, with the final goal to obtain a scaffold for the covalent linkage of cysteamine hydrochloride. The interaction between clotrimazole and the pristine components, namely cyclodextrin and halloysite, was thoroughly investigated by several techniques such as DSC, TGA, UV–vis spectroscopy and some adsorption studies were, also, carried out. The release of the antifungine molecule was finally investigated in a medium …

02 engineering and technologyengineering.material010402 general chemistry01 natural sciencesHalloysiteAdsorptionGeochemistry and PetrologymedicineMoleculeSettore CHIM/02 - Chimica Fisicachemistry.chemical_classificationCyclodextrinClotrimazoletechnology industry and agricultureFunctionalized halloysite Cyclodextrin Clotrimazole Drug carrierGeologySettore CHIM/06 - Chimica Organica021001 nanoscience & nanotechnology0104 chemical scienceschemistryChemical engineeringCovalent bondengineeringSurface modificationlipids (amino acids peptides and proteins)Nanocarriers0210 nano-technologymedicine.drugApplied Clay Science
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Localization microscopy of DNA in situ using Vybrant(®) DyeCycle™ Violet fluorescent probe: A new approach to study nuclear nanostructure at single m…

2016

Higher order chromatin structure is not only required to compact and spatially arrange long chromatids within a nucleus, but have also important functional roles, including control of gene expression and DNA processing. However, studies of chromatin nanostructures cannot be performed using conventional widefield and confocal microscopy because of the limited optical resolution. Various methods of superresolution microscopy have been described to overcome this difficulty, like structured illumination and single molecule localization microscopy. We report here that the standard DNA dye Vybrant(®) DyeCycle™ Violet can be used to provide single molecule localization microscopy (SMLM) images of …

0301 basic medicine02 engineering and technologyBiologyChromosomeslaw.inventionVybrant DyeCycle Violet03 medical and health sciencesDNA dyesHigher Order Chromatin StructureConfocal microscopylawphotoconversionMicroscopyChlorocebus aethiopsAnimalsdSTORMSMLMVero CellsFluorescent Dyeschromatin structureCell NucleusResolution (electron density)DNA replicationCell BiologyDNA021001 nanoscience & nanotechnologySingle Molecule ImagingFluorescenceSingle Molecule ImagingChromatinCell biologyNanostructures030104 developmental biologyDrosophila melanogasterMicroscopy FluorescenceBiophysics0210 nano-technologyExperimental cell research
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Water Structure in Proteins in Solid State Studied by Near Infrared Spectroscopy

2017

Water adsorption in proteins is the crucial process of protein folding and structure stabilizing. Adsorption of water on proteins can be evaluated by near-infrared spectroscopy, a useful technique for observing combination frequency of a water molecule. In this work, albumin, lysozyme, and silk, were used as models for α-helix and β-pleated sheet proteins. Their NIR spectra during water adsorption process were measured by using an NIR spectrometer equipped with a transflectance accessory. Moreover, the quantitative adsorption of water was determined by gravimetric technique. The results indicate that, there are five different NIR absorptions arise from the OH combination frequencies of wate…

0301 basic medicine030103 biophysicsChemistryMechanical EngineeringNear-infrared spectroscopyAnalytical chemistry03 medical and health scienceschemistry.chemical_compoundSILKAdsorptionMechanics of MaterialsMoleculeGravimetric analysisGeneral Materials ScienceProtein foldingLysozymeSpectroscopy
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