Search results for "PROTEIN"

showing 10 items of 21431 documents

Local and systemic mycorrhiza-induced protection against the ectoparasitic nematode Xiphinema index involves priming of defence gene responses in gra…

2012

International audience; The ectoparasitic dagger nematode (Xiphinema index), vector of Grapevine fanleaf virus (GFLV), provokes gall formation and can cause severe damage to the root system of grapevines. Mycorrhiza formation by Glomus (syn. Rhizophagus) intraradices BEG141 reduced both gall formation on roots of the grapevine rootstock SO4 (Vitis berlandierixV. riparia) and nematode number in the surrounding soil. Suppressive effects increased with time and were greater when the nematode was post-inoculated rather than co-inoculated with the arbuscular mycorrhizal (AM) fungus. Using a split-root system, decreased X. index development was shown in mycorrhizal and non-mycorrhizal parts of my…

0106 biological sciencesNematodaPhysiology[SDV]Life Sciences [q-bio]NepovirusPlant Science01 natural sciencesXiphinema indexPlant RootsGlomeromycota03 medical and health sciencesGene Expression Regulation PlantMycorrhizaeBotanyGallAnimalsVitisMycorrhizaGlomeromycotaGlomus030304 developmental biologyPlant DiseasesPlant Proteins2. Zero hunger0303 health sciencesbiologyarbuscular mycorrhizaGrapevine fanleaf virussplit-root systembiology.organism_classificationgrapevineNematode[SDE]Environmental Sciencesbioprotectionxiphinema indexdefence gene expressionRootstock010606 plant biology & botanyResearch Paper
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Evidence for specific, high-affinity binding sites for a proteinaceous elicitor in tobacco plasma membrane

1995

Abstract Binding of cryptogein, a proteinaceous elicitor, was studied on tobacco plasma membrane. The binding of the [125I]cryptogein was saturable, reversible and specific with an apparent Kd of 2 nM. A single class of cryptogein binding sites was found with a sharp optimum pH for binding at about pH 7.0. The high-affinity correlates with cryptogein concentrations required for biological activity in vivo.

0106 biological sciencesNicotiana tabacumBiophysics[SDV.BC]Life Sciences [q-bio]/Cellular Biology01 natural sciencesBiochemistryFungal Proteins03 medical and health sciencesStructural BiologyIn vivoTobaccoGeneticsBinding siteReceptor[SDV.BC] Life Sciences [q-bio]/Cellular BiologyMolecular BiologyComputingMilieux_MISCELLANEOUS030304 developmental biology0303 health sciencesBinding SitesbiologyNicotiana tabacumChemistryAlgal ProteinsCell MembraneElicitinBiological activityCell BiologyElicitorbiology.organism_classification3. Good healthElicitorKineticsPlants ToxicMembraneBiochemistryCryptogeinPlasma membraneReceptor010606 plant biology & botany
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DNA polymorphism at the FRIGIDA gene in Arabidopsis thaliana : extensive nonsynonymous variation is consistent with local selection for flowering time

2002

FRIGIDA (FRI) is a major gene involved in the regulation of flowering time in Arabidopsis thaliana. Nucleotide variation at this gene was investigated by sequencing 25 field ecotypes collected from western Europe. Genetic diversity at FRI was characterized by a high number of haplotypes and an excess of low-frequency polymorphisms. A large excess of intraspecific nonsynonymous variation associated with low synonymous variation was detected along the first exon in the FRI gene. In contrast, no excess of nonsynonymous divergence was detected between A. thaliana and A. lyrata. The Tajima and McDonald and Kreitman tests, however, suggested that this gene has evolved in a nonneutral fashion. Non…

0106 biological sciencesNonsynonymous substitutionArabidopsisFlowers01 natural sciences03 medical and health sciencesExonGenetics[SDV.BBM] Life Sciences [q-bio]/Biochemistry Molecular BiologyArabidopsis thaliana[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyMolecular BiologyGeneEcology Evolution Behavior and SystematicsPhylogenyComputingMilieux_MISCELLANEOUS030304 developmental biologyGeneticsRecombination Genetic0303 health sciencesGenetic diversityPolymorphism GeneticbiologyEcotypeArabidopsis ProteinsHaplotypeGenetic VariationSequence Analysis DNAbiology.organism_classificationMajor genePhenotype010606 plant biology & botany
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Gene expression levels influence amino acid usage and evolutionary rates in endosymbiotic bacteria

2005

International audience; Most endosymbiotic bacteria have extremely reduced genomes, accelerated evolutionary rates, and strong AT base compositional bias thought to reflect reduced efficacy of selection and increased mutational pressure. Here, we present a comparative study of evolutionary forces shaping five fully sequenced bacterial endosymbionts of insects. The results of this study were three-fold: (i) Stronger conservation of high expression genes at not just nonsynonymous, but also synonymous, sites. (ii) Variation in amino acid usage strongly correlates with GC content and expression level of genes. This pattern is largely explained by greater conservation of high expression genes, l…

0106 biological sciencesNonsynonymous substitutionInsectafood.ingredientBlochmanniaBiology010603 evolutionary biology01 natural sciencesGenomeEvolution Molecular03 medical and health sciencesfoodBacterial ProteinsBuchneraSpecies SpecificityGeneticsAnimalsAmino AcidsCodonSymbiosisWigglesworthiaGene030304 developmental biology2. Zero hungerGeneticschemistry.chemical_classification0303 health sciences[SDV.GEN]Life Sciences [q-bio]/GeneticsBacteriaGene Expression Regulation BacterialGeneral Medicinebiology.organism_classificationAT Rich SequenceGC Rich SequenceAmino acidINSECTEAmino Acid SubstitutionchemistryCodon usage biasMutationDatabases Nucleic AcidBuchneraGC-content
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Nucleotide Variability at the Acetyl Coenzyme A Carboxylase Gene and the Signature of Herbicide Selection in the Grass Weed Alopecurus myosuroides (H…

2004

Acetyl coenzyme A carboxylase (ACCase) is the target of highly effective herbicides. We investigated the nucleotide variability of the ACCase gene in a sample of 18 black-grass (Alopecurus myosuroides [Huds.]) populations to search for the signature of herbicide selection. Sequencing 3,396 bp encompassing ACCase herbicide-binding domain in 86 individuals revealed 92 polymorphisms, which formed 72 haplotypes. The ratio of nonsynonymous versus synonymous substitutions was very low, in agreement with ACCase being a vital metabolic enzyme. Within black grass, most nonsynonymous substitutions were related to resistance to ACCase-inhibiting herbicides. Differentiation between populations was stro…

0106 biological sciencesNonsynonymous substitutionMolecular Sequence DataStatistics as TopicBiologyGenes PlantPoaceae01 natural sciencesLinkage DisequilibriumNucleotide diversity03 medical and health sciences[SDV.BBM] Life Sciences [q-bio]/Biochemistry Molecular BiologyGeneticsVULPIN[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyMolecular BiologyGeneAllelesPhylogenyComputingMilieux_MISCELLANEOUSEcology Evolution Behavior and SystematicsSelection (genetic algorithm)030304 developmental biologychemistry.chemical_classificationGenetics0303 health sciencesPolymorphism GeneticBase SequenceModels GeneticHaplotypeAlopecurus myosuroidesGenetic VariationDNASequence Analysis DNAPesticidebiology.organism_classificationProtein Structure TertiaryEnzymeHaplotypeschemistrySoftwareAcetyl-CoA Carboxylase010606 plant biology & botanyMolecular Biology and Evolution
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Characterization of a proton pump from Acer pseudoplatanus cell microsomes

1985

Abstract An Acer pseudoplatanus cell microsomal fraction was enriched in ATPase by sedimentation through a sucrose cushion and treatment with Triton X-100. This activity, which reached 0.9 μmol P i min −1 mg −1 protein, was specific for ATP, slightly stimulated by K + , inhibited by orthovanadate and diethylstilbestrol, insensitive to oligomycin and azide, and had a K m - value of 0.51 mM for MgATP. ATP-dependent proton translocation was demonstrated by the ΔpH probe acridine orange. This activity had a optimum at pH 6.5, was substrate specific for ATP, and was strongly dependent on K + . Preparations of plasma membrane ATPase from A. pseudoplatanus cell culture thus posses biochemical prop…

0106 biological sciencesOligomycinATPaseDiaphragm pumpPlant ScienceBiology01 natural sciences[SDV.GEN.GPL]Life Sciences [q-bio]/Genetics/Plants genetics03 medical and health scienceschemistry.chemical_compound[SDV.GEN.GPL] Life Sciences [q-bio]/Genetics/Plants geneticsProton transportGenetics030304 developmental biologychemistry.chemical_classification0303 health sciencesAcridine orangeERABLE FAUX PLATANEGeneral MedicinePOMPE PROTONAcer pseudoplatanusbiology.organism_classificationEnzymeBiochemistrychemistrybiology.proteinMicrosomeAgronomy and Crop Science010606 plant biology & botanyPlant Science
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Phosphorylated intermediate of a transport ATPase and activity of protein kinase in membranes from corn roots

1983

A maize-root microsomal fraction was enriched in ATPase by treatment with Triton X-100. This activity, which reached 1.2-2.0/mumol Pi x min-1 x mg protein-1, was specific for ATP, very slightly stimulated by K+, inhibited by orthovanadate and diethylstilbestrol, resistant to oligomycin and azide, and had a Km of 1.2 mM MgATP. Incubation of the microsomal fraction with [gamma 32-P]ATP followed by electrophoresis in acid conditions revealed the presence of several phosphoproteins. The phosphorylation of a 110000-Mr polypeptide reached the steady-state level in less than 5 s and rapidly turned over the phosphate group. The phosphorylation level was an hyperbolic function of the [ATP] with a Km…

0106 biological sciencesOligomycinATPaseHydroxylamineHydroxylaminesZea mays01 natural sciencesBiochemistry03 medical and health scienceschemistry.chemical_compoundHydroxylamineCationsMicrosomes[SDV.BBM] Life Sciences [q-bio]/Biochemistry Molecular BiologyVanadate[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyPhosphorylationProtein kinase ADiethylstilbestrol030304 developmental biologyAdenosine Triphosphatases2. Zero hunger0303 health sciencesbiologyCell MembraneBiological TransportVanadiumMolecular biologyMembranechemistryBiochemistryPhosphoproteinbiology.proteinPhosphorylationVanadatesPeptidesProtein Kinases010606 plant biology & botany
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Regulation of Nicotiana tabacum osmotic stress-activated protein kinase and its cellular partner GAPDH by nitric oxide in response to salinity

2010

Several studies focusing on elucidating the mechanism of NO (nitric oxide) signalling in plant cells have highlighted that its biological effects are partly mediated by protein kinases. The identity of these kinases and details of how NO modulates their activities, however, remain poorly investigated. In the present study, we have attempted to clarify the mechanisms underlying NO action in the regulation of NtOSAK (Nicotiana tabacum osmotic stress-activated protein kinase), a member of the SNF1 (sucrose non-fermenting 1)-related protein kinase 2 family. We found that in tobacco BY-2 (bright-yellow 2) cells exposed to salt stress, NtOSAK is rapidly activated, partly through a NO-dependent pr…

0106 biological sciencesOsmosisSalinityNicotiana tabacumMolecular Sequence DataNitric Oxide01 natural sciencesBiochemistry03 medical and health sciencesEnzyme activatorStress PhysiologicalTobaccoASK1[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyAmino Acid SequenceProtein kinase AMolecular BiologyGlyceraldehyde 3-phosphate dehydrogenaseCells Cultured030304 developmental biologyPlant Proteins0303 health sciencesbiologyKinaseGlyceraldehyde-3-Phosphate DehydrogenasesLife SciencesCell BiologyS-Nitrosylationbiology.organism_classification3. Good healthBiochemistrybiology.proteinPhosphorylationProtein Kinases010606 plant biology & botany
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Kinetic studies on protoporphyrinogen oxidase inhibition by diphenyl ether herbicides

1991

Diphenyl ethers (DPEs) and related herbicides are powerful inhibitors of protoporphyrinogen oxidase, an enzyme involved in the biosynthesis of haems and chlorophylls. The inhibition kinetics of protoporphyrinogen oxidase of various origins by four DPEs, (methyl)-5-[2-chloro-4-(trifluoromethyl)phenoxy]-2-nitrobenzoic acid (acifluorfen and its methyl ester, acifluorfen-methyl), methyl-5-[2-chloro-4-(trifluoromethyl) phenoxy]-2-chlorobenzoate (LS 820340) and methyl-5-[2-chloro-5-(trifluoromethyl)phenoxy]-2-nitrobenzoic acid (RH 5348), were studied. The inhibitions of the enzymes from maize (Zea mays) mitochondrial and etiochloroplastic membranes and mouse liver mitochondrial membranes were com…

0106 biological sciencesOxidoreductases Acting on CH-CH Group DonorsStereochemistry[SDV]Life Sciences [q-bio]Carboxylic acidMitochondria LiverEtherSaccharomyces cerevisiaeAcifluorfen01 natural sciencesBiochemistryMitochondrial ProteinsMiceStructure-Activity Relationship03 medical and health scienceschemistry.chemical_compoundMALHERBOLOGIEPhenolsAnimalsProtoporphyrinogen OxidaseMolecular BiologyComputingMilieux_MISCELLANEOUS030304 developmental biologychemistry.chemical_classification0303 health sciencesTrifluoromethylFlavoproteinsHerbicidesDiphenyl etherIntracellular MembranesCell BiologyPlantsMitochondriaProtoporphyrinogen IX[SDV] Life Sciences [q-bio]KineticsEnzymechemistryProtoporphyrinogen oxidaseOxidoreductasesEthersResearch Article010606 plant biology & botanyBiochemical Journal
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Bacterial rhamnolipids are novel MAMPs conferring resistance to Botrytis cinerea in grapevine

2009

International audience; Rhamnolipids produced by the bacteria Pseudomonas aeruginosa are known as very efficient biosurfactant molecules. They are used for a wide range of industrial applications, especially in food, cosmetics and pharmaceutical formulations as well as in bioremediation of pollutants. In this paper, the role of rhamnolipids as novel molecules triggering defence responses and protection against the fungus Botrytis cinerea in grapevine is presented. The effect of rhamnolipids was assessed in grapevine using cell suspension cultures and vitro-plantlets. Ca2+ influx, mitogen-activated protein kinase activation and reactive oxygen species production form part of early signalling…

0106 biological sciencesPOTENTIATIONPhysiologyPlant ScienceFungusmedicine.disease_cause01 natural sciencesPSEUDOMONAS AERUGINOSAMicrobiologySurface-Active Agents03 medical and health sciencesBioremediationBOTRYTIS CINEREA[CHIM.ANAL]Chemical Sciences/Analytical chemistrySpore germinationmedicineGRAPEVINEVitis[SDV.BBM.BC]Life Sciences [q-bio]/Biochemistry Molecular Biology/Biochemistry [q-bio.BM]Cells CulturedComputingMilieux_MISCELLANEOUS030304 developmental biologyBotrytis cinerea[SDV.EE]Life Sciences [q-bio]/Ecology environment0303 health sciencesbiologyPseudomonas aeruginosa[CHIM.ORGA]Chemical Sciences/Organic chemistryfungiPLANT DEFENCE[SDV.BBM.BM]Life Sciences [q-bio]/Biochemistry Molecular Biology/Molecular biologyRHAMNOLIPIDESpores Fungalbiology.organism_classification[SDV.BBM.BC]Life Sciences [q-bio]/Biochemistry Molecular Biology/Biomolecules [q-bio.BM][SDV.BV.PEP]Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacyRNA PlantCalciumBotrytisMAMPsGlycolipidsMitogen-Activated Protein KinasesReactive Oxygen SpeciesBacteria010606 plant biology & botany
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