Search results for "RIP"
showing 10 items of 9780 documents
In vivoanalysis of the lumenal binding protein (BiP) reveals multiple functions of its ATPase domain
2007
International audience; The endoplasmic reticulum (ER) chaperone binding protein (BiP) binds exposed hydrophobic regions of misfolded proteins. Cycles of ATP hydrolysis and nucleotide exchange on the ATPase domain were shown to regulate the function of the ligand-binding domain in vitro. Here we show that ATPase mutants of BiP with defective ATP-hydrolysis (T46G) or ATP-binding (G235D) caused permanent association with a model ligand, but also interfered with the production of secretory, but not cytosolic, proteins in vivo. Furthermore, the negative effect of BiP(T46G) on secretory protein synthesis was rescued by increased levels of wild-type BiP, whereas the G235D mutation was dominant. U…
The effect of buffer strip width and selective logging on streamside plant communities
2019
Background Riparian forests surrounding streams host high biodiversity values, but are threatened by clear-cut logging. Narrow buffer strips of about 15 m are commonly left between the stream and the clear-cut, but studies suggest that the buffer width should be at least 30 m to protect riparian plant communities. Moreover, selective logging is often allowed on the buffer strips in order to increase economic gain. We used an experiment of 43 riparian sites where buffer strip width and selective logging within the strip were manipulated and supplemented with unlogged control sites. We report the short-term changes in the community composition of vascular plants and mosses near the stream (0–…
Fossorial but widespread: the phylogeography of the common spadefoot toad (Pelobates fuscus), and the role of the Po Valley as a major source of gene…
2007
International audience; Pelobates fuscus is a fossorial amphibian that inhabits much of the European plain areas. To unveil traces of expansion and contraction events of the species' range, we sequenced 702 bp of the mitochondrial cytochrome b gene. To infer the population history we applied phylogeographical methods, such as nested clade phylogeographical analysis (NCPA), and used summary statistics to analyse population structure under a neutral model of evolution. Populations were assigned to different drainage systems and we tested hypotheses of explicit refugial models using information from analysis of molecular variance, nucleotide diversity, effective population size estimation, NCP…
OMICfpp: a fuzzy approach for paired RNA-Seq counts
2019
© The Author(s) 2019.
Analysis of Hemolymph Ecdysteroids in the Female Earwig: Labidura riparia
1991
International audience; The nature of hemolymph ecdysteroids was analyzed by high performance liquid chromatography-radioimmunoassay, during the two main phases of the reproductive cycles of Labidura riparia. 20-hydroxyecdysone and ecdysone were present together with polar and apoiar products.Changes in the ecdysone/20-hydroxyecdysone ratio were evidenced according to the ovarian development. During natural (feeding and sexual phase of the cycle) or induced ovarian development, an increase of the ratio occurred whereas, during ovarian rest (fasting and/or parental phase), a significant decrease was observed.Up to 40 days after ovariectomy, immunoreactive compounds were observed in the hemol…
A high-quality genome assembly from short and long reads for the non-biting midge Chironomus riparius (Diptera)
2020
AbstractBackgroundChironomus riparius is of great importance as a study species in various fields like ecotoxicology, molecular genetics, developmental biology and ecology. However, only a fragmented draft genome exists to date, hindering the recent rush of population genomic studies in this species.FindingsMaking use of 50 NGS datasets, we present a hybrid genome assembly from short and long sequence reads that make C. riparius’ genome one of the most contiguous Dipteran genomes published, the first complete mitochondrial genome of the species and the respective recombination rate as one of the first insect recombination rates at all.ConclusionsThe genome and associated resources will be h…
Calling behaviour of female Periplaneta americana: Behavioural analysis and identification of the pheromone source
1993
Abstract The site for the production of Periplanone B, one of the components of the female sex pheromone of Periplaneta americana , was localized in glands situated in the genital atrium, and we have called these structures atrial glands. While emitting the sex pheromone, females adopt a characteristic calling posture during which time the atrial glands are exposed. Behavioural assays of males utilizing pentane extracts of various female body parts revealed that atrial gland extracts are highly attractive, and induced more wing-raising behaviour, than any other female body part. GC-MS analyses support these results by revealing that Periplanone B is only present in the atrial glands. We est…
Soybean and casein hydrolysates induce grapevine immune responses and resistance against Plasmopara viticola
2014
International audience; Plasmopara viticola, the causal agent of grapevine downy mildew, is one of the most devastating grape pathogen in Europe and North America. Although phytochemicals are used to control pathogen infections, the appearance of resistant strains and the concern for possible adverse effects on environment and human health are increasing the search for alternative strategies. In the present investigation, we successfully tested two protein hydrolysates from soybean (soy) and casein (cas) to trigger grapevine resistance against P. viticola. On Vitis vinifera cv. Marselan plants, the application of soy and cas reduced the infected leaf surface by 76 and 63%, as compared to th…
Food Quality, Sensory Attributes and Nutraceutical Value of Fresh “Osteen” Mango Fruit Grown under Mediterranean Subtropical Climate Compared to Impo…
2020
Mango is a fruit with a very short shelf-life due to its rapid ripeness after harvest
Functional responses of multitaxa communities to disturbance and stress gradients in a restored floodplain
2015
Trait-based approaches can reveal the mechanisms through which disturbances or stress impact communities, allowing comparisons of the role of different mechanisms in shaping communities among taxonomic groups. Such information can lead to higher comparability, transferability and predictability of the outcome of restoration projects. However, multitaxa trait-based approaches were rarely used in the context of ecosystem restoration. We investigated the responses to environmental gradients of seven taxa (vascular plants, staphylinid and carabid beetles, spiders, isopods, diplopods and earthworms) in a restored floodplain using a species traits approach. We assessed the impact of flood disturb…