Search results for "Synchrotrons"

showing 10 items of 18 documents

Paleohistology of the Cretaceous resin‐producing conifer Geinitzia reichenbachii using X‐ray synchrotron microtomography

2021

International audience; PremiseThe conifer Geinitzia reichenbachii was a common member of the Cretaceous Laurasian floras. However, the histology of G. reichenbachii leafy axes was never described in detail, and our knowledge of its paleoecology remains very limited. Using new and exquisitely preserved silicified material from the Upper Cretaceous of western France, we describe G. reichenbachii from the gross morphology to the cellular scale, then discuss paleoecological and taphonomical implications.MethodsWe examined specimens from two localities in western France (Claix and Moragne) using propagation phase-contrast X-ray synchrotron microtomography.ResultsThe cuticle and the inner tissue…

0106 biological sciences010506 paleontologyContext (language use)Plant ScienceBiology010603 evolutionary biology01 natural sciencesSedimentary depositional environmentPaleontologyGeneticsMesozoicleafy twigsEcosystemEcology Evolution Behavior and Systematics0105 earth and related environmental sciencespaleoecophysiologyPermineralizationpermineralizationX-RaysConiferalesX-ray synchrotron microtomographX-Ray MicrotomographyGeinitziaceae15. Life on landCretaceousAmberTracheophyta[SDE]Environmental SciencesPaleobotanyTracheidPaleoecologyfossilssilicification[SDU.STU.PG]Sciences of the Universe [physics]/Earth Sciences/PaleontologySynchrotronsMesozoic paleobotanyAmerican Journal of Botany
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Going beyond histology. Synchrotron micro-computed tomography as a methodology for biological tissue characterization: from tissue morphology to indi…

2009

Current light microscopic methods such as serial sectioning, confocal microscopy or multiphoton microscopy are severely limited in their ability to analyse rather opaque biological structures in three dimensions, while electron optical methods offer either a good three-dimensional topographic visualization (scanning electron microscopy) or high-resolution imaging of very thin samples (transmission electron microscopy). However, sample preparation commonly results in a significant alteration and the destruction of the three-dimensional integrity of the specimen. Depending on the selected photon energy, the interaction between X-rays and biological matter provides semi-transparency of the spe…

Cartilage Articularthree-dimensional imagingMaterials scienceOpacityScanning electron microscope1004Biomedical EngineeringBiophysicsAnalytical chemistryBioengineeringPhoton energyIn Vitro TechniquesBiochemistrysynchrotron micro-computed tomographylaw.inventionBiomaterialshistologyChondrocyteslawConfocal microscopyResearch articlesAnimalscartilageCells CulturedTomographic reconstruction30HistologySynchrotron124Radiographic Image EnhancementTransmission electron microscopychondrocyteCattleTomography X-Ray ComputedSynchrotronsscanning electron microscopyBiotechnologyBiomedical engineeringJournal of the Royal Society, Interface
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3D spectral imaging with synchrotron Fourier transform infrared spectro-microtomography

2013

We report Fourier transform infrared spectro-microtomography, a nondestructive three-dimensional imaging approach that reveals the distribution of distinctive chemical compositions throughout an intact biological or materials sample. The method combines mid-infrared absorption contrast with computed tomographic data acquisition and reconstruction to enhance chemical and morphological localization by determining a complete infrared spectrum for every voxel (millions of spectra determined per sample).

Chemical imagingmedicine.medical_specialtyMaterials scienceInfrared spectroscopyBiochemistryFourier transform spectroscopyPhysics::GeophysicsMicesymbols.namesakeImaging Three-DimensionalOpticsSpectroscopy Fourier Transform InfraredMicroscopyImage Processing Computer-AssistedmedicineAnimalsHumansFourier transform infrared spectroscopyMolecular BiologyEmbryonic Stem Cellsbusiness.industryX-Ray MicrotomographyCell BiologyWoodSpectral imagingPopulusFourier transformsymbolsbusinessChemical fingerprintingSynchrotronsHairBiotechnologyNature Methods
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Synchrotron Radiation-Based Micro-XANES and Micro-XRF Study of Unsuccessfully Produced Egyptian Blue from the Late Hellenistic Production Site of Kos…

2021

International audience; This paper examines the production technology of Egyptian blue, an ancient artificial pigment, through the investigation of an unsuccessfully produced pellet derived from the Hellenistic production site of Kos (Dodecanese, Greece). This heterogeneous material was investigated by a combination of laboratory and synchrotron radiation-based (SR) techniques: scanning electron microscopy coupled with energy-dispersive Xray spectrometry, micro-Raman spectroscopy, high-resolution SR micro-X-ray fluorescence spectroscopy, and SR micro-X-ray absorption near-edge structure spectroscopy (XANES), at the ID21 beamline of the European Synchrotron Radiation Facility. Principal comp…

CupriteAbsorption spectroscopyMineralogySynchrotron radiationLarge dataset01 natural sciencesFluorescence spectroscopyArticleAnalytical ChemistrySynchrotronEgyptian bluechemistry.chemical_compoundAbsorption spectroscopy0601 history and archaeology[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyCopper oxideSpectroscopyFluorescence spectroscopyX ray absorption060102 archaeologyGreeceChemistryX ray absorption near edge structure spectroscopyOxide mineralSilicates010401 analytical chemistry06 humanities and the artsXANES0104 chemical sciencesX-Ray Absorption SpectroscopyBeamlinevisual_artvisual_art.visual_art_mediumScanning electron microscopyCopperSynchrotrons
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Laboratory phase‐contrast nanotomography of unstained Bombus terrestris compound eyes

2021

Imaging the visual systems of bumblebees and other pollinating insects may increase understanding of their dependence on specific habitats and how they will be affected by climate change. Current high-resolution imaging methods are either limited to two dimensions (light- and electron microscopy) or have limited access (synchrotron radiation x-ray tomography). For x-ray imaging, heavy metal stains are often used to increase contrast. Here, we present micron-resolution imaging of compound eyes of buff-tailed bumblebees (Bombus terrestris) using a table-top x-ray nanotomography (nano-CT) system. By propagation-based phase-contrast imaging, the use of stains was avoided and the microanatomy co…

HistologyMaterials sciencecompound eyesOsmium Tetroxidemedia_common.quotation_subjectSynchrotron radiation02 engineering and technologyPathology and Forensic Medicinelaw.inventionlaboratory nano-CT03 medical and health scienceschemistry.chemical_compoundNuclear magnetic resonancelawContrast (vision)AnimalsMicroscopy Phase-Contrasttietokonetomografia030304 developmental biologymedia_common0303 health sciencesbiologykimalaisetCompound eyeX-Ray MicrotomographybumblebeeBees021001 nanoscience & nanotechnologybiology.organism_classificationphase contrast systemkuvantaminenOsmium tetroxidechemistryTransmission electron microscopycomparisonBombus terrestrisTomographyElectron microscope0210 nano-technologyLaboratoriesTomography X-Ray ComputedSynchrotronssilmät
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Purification, crystallization and preliminary X-ray studies of sylvaticin, an elicitin-like protein from Pythium sylvaticum.

2003

Sylvaticin belongs to the elicitin family. These 10 kDa oomycetous proteins induce a hypersensitive response in plants, including necrosis and cell death, but subsequently leading to a non-specific systemic acquired resistance (SAR) against other pathogens. Sylvaticin has been crystallized using PEG 2000 MME as a precipitant agent in the presence of nickel chloride. The crystals belong to space group C2, with unit-cell parameters a = 99.29, b = 25.67, c = 67.45 A, beta = 99.66 degrees. Diffraction data were recorded to 2.1 A resolution at a synchrotron-radiation source.

Hypersensitive responseStereochemistryProtein ConformationPythiumBiologyCrystallography X-Raylaw.inventionPolyethylene GlycolsProtein structureStructural BiologylawNickelPEG ratioCrystallizationFuransAlgal ProteinsX-rayProteinsElicitinGeneral Medicinebiology.organism_classificationCrystallographySolventsPythium sylvaticumSystemic acquired resistanceSynchrotronsActa crystallographica. Section D, Biological crystallography
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Precision luminosity measurements at LHCb

2014

Measuring cross-sections at the LHC requires the luminosity to be determined accurately at each centre-of-mass energy $\sqrt{s}$. In this paper results are reported from the luminosity calibrations carried out at the LHC interaction point 8 with the LHCb detector for $\sqrt{s}$ = 2.76, 7 and 8 TeV (proton-proton collisions) and for $\sqrt{s_{NN}}$ = 5 TeV (proton-lead collisions). Both the "van der Meer scan" and "beam-gas imaging" luminosity calibration methods were employed. It is observed that the beam density profile cannot always be described by a function that is factorizable in the two transverse coordinates. The introduction of a two-dimensional description of the beams improves sig…

Instrumentation for particle accelerators and storage rings - high energy (linear acceleratorsHigh Energy Physics - ExperimentHigh Energy Physics - Experiment (hep-ex)cluster finding[PHYS.HEXP]Physics [physics]/High Energy Physics - Experiment [hep-ex]Nuclear Experiment06.20.fbInstrumentationMathematical PhysicsQCPhysicsLuminosity (scattering theory)Large Hadron ColliderPattern recognition cluster finding calibration and fitting methodssynchrotrons)DetectorPattern recognition cluster finding calibration and fitting methodsComputer interfacecalibration and fitting methodsFísica nuclearTracking and position-sensitive detectorLHCParticle Physics - ExperimentParticle physics29.40.GxPattern recognition cluster finding calibration and fitting methods; Instrumentation for particle accelerators and storage rings - high energy (linear accelerators synchrotrons)Astrophysics::High Energy Astrophysical PhenomenaFOS: Physical sciencesAstrophysics::Cosmology and Extragalactic AstrophysicsLHCb - Abteilung HofmannPattern recognition cluster finding calibration and fitting methodInstrumentation for particle accelerators and storage rings - high energy (linear accelerators synchrotrons)NOConsistency (statistics)Pattern recognitionCalibrationSDG 7 - Affordable and Clean EnergyInstrumentation for particle accelerators and storage rings - high energy (linear accelerators synchrotrons)/dk/atira/pure/sustainabledevelopmentgoals/affordable_and_clean_energyInteraction pointStandards and calibrationFunction (mathematics)29.50.+vLHCbInstrumentation for particle accelerators and storage rings - high energy (linear accelerators synchrotrons); Pattern recognition cluster finding calibration and fitting methods; Instrumentation; Mathematical PhysicsTEVPhysics::Accelerator PhysicsHigh Energy Physics::ExperimentInstrumentation for particle accelerators and storage rings - high energy (linear accelerators synchrotrons); Pattern recognition cluster finding calibration and fitting methodsEnergy (signal processing)
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Remodeling of alveolar septa after murine pneumonectomy

2015

In most mammals, removing one lung (pneumonectomy) results in the compensatory growth of the remaining lung. In mice, stereological observations have demonstrated an increase in the number of mature alveoli; however, anatomic evidence of the early phases of alveolar growth has remained elusive. To identify changes in the lung microstructure associated with neoalveolarization, we used tissue histology, electron microscopy, and synchrotron imaging to examine the configuration of the alveolar duct after murine pneumonectomy. Systematic histological examination of the cardiac lobe demonstrated no change in the relative frequency of dihedral angle components (Ends, Bends, and Junctions) ( P &gt…

MalePulmonary and Respiratory MedicinePathologymedicine.medical_specialtyPhysiologymedicine.medical_treatmentCompensatory growth (organ)Neovascularization PhysiologicMicePneumonectomyPhysiology (medical)AnimalsSurface TensionMedicinePneumonectomyLungbusiness.industryRegeneration (biology)ArticlesCell BiologyAnatomyrespiratory systemMice Inbred C57BLPulmonary Alveolimedicine.anatomical_structureMicroscopy Electron ScanningTomography X-Ray ComputedbusinessSynchrotronsAmerican Journal of Physiology-Lung Cellular and Molecular Physiology
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Geochemical Interactions of Plutonium with Opalinus Clay Studied by Spatially Resolved Synchrotron Radiation Techniques

2017

Plutonium plays an important role within nuclear waste materials because of its long half-life and high radiotoxicity. The aim of this study was to investigate with high spatial resolution the reactivity of the more oxidized forms of Pu(V,VI) within Opalinus Clay (OPA) rock, a heterogeneous, natural argillaceous rock considered as a potential repository host. A combination of synchrotron based X-ray microprobe and bulk techniques was used to study the spatial distribution and molecular speciation of Pu within OPA after diffusion and sorption processes. Microscopic chemical images revealed a pronounced impact of geochemical heterogeneities concerning the reactivity of the natural barrier mat…

MicroprobeAbsorption spectroscopyMineralogychemistry.chemical_elementSynchrotron radiation010501 environmental sciences010403 inorganic & nuclear chemistry01 natural scienceslaw.inventionPlutonium opalinus clay sorption XAS ROBLlawEnvironmental ChemistryDiffusion (business)0105 earth and related environmental sciencesChemistryRadioactive wasteSorptionGeneral ChemistryPlutoniumSynchrotron0104 chemical sciencesPlutoniumRadioactive WasteClayAluminum SilicatesSynchrotronsEnvironmental Science & Technology
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Using synchrotrons and XFELs for time-resolved X-ray crystallography and solution scattering experiments on biomolecules

2015

International audience; Time-resolved structural information is key to understand the mechanism of biological processes, such as catalysis and signalling. Recent developments in X-ray sources as well as data collection and analysis methods are making routine time-resolved X-ray crystallography and solution scattering experiments a real possibility for structural biologists. Here we review the information that can be obtained from these techniques and discuss the considerations that must be taken into account when designing a time-resolved experiment.

NanotechnologyElectrons010402 general chemistryCrystallography X-Ray01 natural sciencesCatalysi03 medical and health sciencesStructural BiologyScattering radiationHumansScattering RadiationStructural DynamicMolecular BiologyAnalysis method030304 developmental biologychemistry.chemical_classificationPhysics[PHYS]Physics [physics]0303 health sciencesScatteringBiomoleculeLasersReaction TriggeringSettore FIS/07 - Fisica Applicata(Beni Culturali Ambientali Biol.e Medicin)0104 chemical sciencesSolutionschemistryX-ray crystallographyAtomic physicsStructural Biology; Structural Dynamics; Catalysis; Reaction TriggeringSynchrotronsCurrent Opinion in Structural Biology
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