Search results for "ToP"

showing 10 items of 17685 documents

An Empirical Evaluation of the Utility of Convex Hull and Standard Ellipse Areas for Assessing Population Niche Widths from Stable Isotope Data

2013

Stable isotope analyses are increasingly employed to characterise population niche widths. The convex hull area (TA) in a δ¹³C–δ¹⁵N biplot has been used as a measure of isotopic niche width, but concerns exist over its dependence on sample size and associated difficulties in among-population comparisons. Recently a more robust method was proposed for estimating and comparing isotopic niche widths using standard ellipse areas (SEA), but this approach has yet to be tested with empirical stable isotope data. The two methods measure different kind of isotopic niche areas, but both are now widely used to characterise isotopic niche widths of populations. We used simulated data and an extensive e…

0106 biological sciencesPopulation Dynamicslcsh:MedicinePopulation Modeling01 natural sciencesTheoretical EcologyFood Web StructureStatisticsRange (statistics)lcsh:ScienceFreshwater EcologyCarbon Isotopeseducation.field_of_studyMultidisciplinaryEcologyδ13CEcologyStable isotope ratioStatisticsFishesBiogeochemistryisotopic nicheTrophic Interactionstrophic nicheCommunity Ecologyconvex hullResearch ArticlePopulationNichestable isotopesBiostatistics010603 evolutionary biologyNiche ConstructionNormal distributionBayesian ellipse areavakaat isotoopitAnimals14. Life underwaterStatistical MethodseducationBiologyEcological nicheNitrogen Isotopes010604 marine biology & hydrobiologylcsh:RComputational BiologySpecies InteractionsSample size determinationSample SizeravintolokeroEnvironmental scienceta1181lcsh:QPopulation EcologyEcosystem ModelingMathematicsPLOS ONE
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Latitudinal clines in the timing and temperature‐sensitivity of photoperiodic reproductive diapause in Drosophila montana

2020

Reproductive diapause is a primary mechanism used by arthropods to synchronize their life cycle with seasonal changes in temperate regions. Our study species, Drosophila montana, represents the northern insect species where flies enter reproductive diapause under short day conditions and where the precise timing of diapause is crucial for both survival and offspring production. We have studied clinal variation in the critical day length for female diapause induction (CDL) and their overall susceptibility to enter diapause (diapause incidence), as well as the temperature sensitivity of these traits. The study was performed using multiple strains from four latitudinal clines of the species – …

0106 biological sciencesPopulationGrowing seasonadaptationBiologyDiapause010603 evolutionary biology01 natural sciencesphenologytalvehtiminenLatitudeTemperate climatecritical photoperiodeducationEcology Evolution Behavior and SystematicsOverwinteringclinal variationsopeutumineneducation.field_of_studyPhenologyEcology010604 marine biology & hydrobiologyilmastonmuutoksetoverwinteringclimate changefenologiaAdaptation
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An early Ca2+ influx is a prerequisite to thaxtomin A-induced cell death in Arabidopsis thaliana cells

2008

International audience; The pathogenicity of various Streptomyces scabies isolates involved in potato scab disease was correlated with the production of thaxtomin A. Since calcium is known as an essential second messenger associated with pathogen-induced plant responses and cell death, it was investigated whether thaxtomin A could induce a Ca 2+ influx related to cell death and to other putative plant responses using Arabidopsis thaliana suspension cells, which is a convenient model to study plant–microbe interactions. A. thaliana cells were treated with micromolar concentrations of thaxto-min A. Cell death was quantified and ion flux variations were analysed from electrophysiological measu…

0106 biological sciencesProgrammed cell death[SDV.BIO]Life Sciences [q-bio]/BiotechnologyPhysiologyCellchemistry.chemical_element[SDV.BC.BC]Life Sciences [q-bio]/Cellular Biology/Subcellular Processes [q-bio.SC]Plant ScienceBiologyCalcium01 natural sciences03 medical and health sciences[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN][SDV.BC.IC]Life Sciences [q-bio]/Cellular Biology/Cell Behavior [q-bio.CB]medicineArabidopsis thaliana[SDV.BBM.BC]Life Sciences [q-bio]/Biochemistry Molecular Biology/Biochemistry [q-bio.BM][SDV.BDD.GAM]Life Sciences [q-bio]/Development Biology/Gametogenesis030304 developmental biology0303 health sciencesVoltage-dependent calcium channelfood and beverages[SDV.BBM.BM]Life Sciences [q-bio]/Biochemistry Molecular Biology/Molecular biology[SDV.BBM.MN]Life Sciences [q-bio]/Biochemistry Molecular Biology/Molecular Networks [q-bio.MN]Streptomyces scabiesbiology.organism_classificationplant pathogenStreptomyces[SDV.BV.PEP]Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacy[SDV.BBM.BC]Life Sciences [q-bio]/Biochemistry Molecular Biology/Biomolecules [q-bio.BM][SDV.BV.AP]Life Sciences [q-bio]/Vegetal Biology/Plant breedingcell deaththaxtomin A[CHIM.POLY]Chemical Sciences/Polymersmedicine.anatomical_structureBiochemistrychemistryion channelSecond messenger systemCalciumSignal transduction010606 plant biology & botanyJournal of Experimental Botany
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Impact of sewage sludges on Medicago truncatula symbiotic proteome

2004

The effects of sewage sludges were investigated on the symbiotic interactions between the model plant Medicago truncatula and the arbuscular mycorrhizal fungus Glomus mosseae or the rhizobial bacteria Sinorhizobium meliloti. By comparison to a control sludge showing positive effects on plant growth and root symbioses, sludges enriched with polycylic aromatic hydrocarbons or heavy metals were deleterious. Symbiosis-related proteins were detected and identified by two-dimensional electrophoresis and matrix-assisted laser desorption ionization mass spectrometry, and image analysis was used to study the effects of sewage sludges on M. truncatula symbiotic proteome.

0106 biological sciencesProteomeSewagePlant ScienceHorticulture01 natural sciencesBiochemistryPeptide Mapping12. Responsible consumption03 medical and health sciencesSymbiosisMycorrhizaeBotanyMedicagoElectrophoresis Gel Two-DimensionalMycorrhizaSymbiosisMolecular BiologyGlomusComputingMilieux_MISCELLANEOUS[SDV.BV.PEP] Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacy030304 developmental biologyPlant Proteins0303 health sciencesSinorhizobium melilotibiologySewagebusiness.industryfungifood and beveragesGeneral MedicineHydrogen-Ion Concentrationbiology.organism_classification6. Clean waterMedicago truncatula[SDV.BV.PEP]Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacySpectrometry Mass Matrix-Assisted Laser Desorption-IonizationProteomebusinessSludge010606 plant biology & botanySinorhizobium meliloti
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Next-generation biological control

2020

Biological control is widely successful at controlling pests, but effective biocontrol agents are now more difficult to import from countries of origin due to more restrictive international trade laws (the Nagoya Protocol). Coupled with increasing demand, the efficacy of existing and new biocontrol agents needs to be improved with genetic and genomic approaches. Although they have been underutilised in the past, application of genetic and genomic techniques is becoming more feasible from both technological and economic perspectives. We review current methods and provide a framework for using them. First, it is necessary to identify which biocontrol trait to select and in what direction. Nex…

0106 biological sciencesProteomicsH10 Pests of plantsInternationalityComputer science[SDV]Life Sciences [q-bio]Laboratory of VirologySequence assemblybiological controlmicrobiome01 natural sciencesGenome editinggeneticsNagoya ProtocolLaboratory of EntomologyCYTOPLASMIC INCOMPATIBILITY2. Zero hunger0303 health sciencesQUANTITATIVE TRAIT LOCICommercefood and beveragesCONTROL AGENTSPE&RCBiosystematiekNASONIA-VITRIPENNISGUT CONTENT-ANALYSIS[SDE]Environmental SciencesTraitinsect breedingAXYRIDIS COLEOPTERA-COCCINELLIDAEOriginal ArticleLaboratory of GeneticsLIFE-HISTORY TRAITSGeneral Agricultural and Biological SciencesGenomicsContext (language use)Computational biology[SDV.BID]Life Sciences [q-bio]/Biodiversityartificial selectionQuantitative trait locusAnimal Breeding and GenomicsLaboratorium voor Erfelijkheidsleer010603 evolutionary biologyGeneral Biochemistry Genetics and Molecular BiologyLaboratorium voor Virologiemodelling03 medical and health sciencesgenomics[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyFokkerij en GenomicaPARASITOID WASPSelection (genetic algorithm)modelling.030304 developmental biologySEX DETERMINATIONOriginal ArticlesLaboratorium voor EntomologieWIASgenome assemblyBiosystematicsEPSartificial selection biological control genetics genome assembly genomics insect breeding microbiome modellingBiological Reviews
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Towards understanding isotope variability in elephant ivory to establish isotopic profiling and source-area determination

2016

Abstract We present here new isotopic data (δ 13 C, δ 15 N, δ 18 O, δ 2 H, and δ 34 S) from pulverised ivory powder, measured by continuous flow isotope ratio mass spectrometry from an unprecedented large dataset of 507 ivory samples, derived from twenty-eight African and six Asian elephant range states. The aim of this study is to assess the accuracy of isotopic fingerprinting and to evaluate its forensic potential and limitations to predict the provenance of ivory of unknown origin. We constructed a nominal assignment framework for the African reference samples, consisting of 208 different sites and applied the weighted k -Nearest Neighbor Classifier with reference site as classifier and …

0106 biological sciencesProvenance010504 meteorology & atmospheric sciencesbiologyEcologyStable isotope ratioIvoryNiche differentiationGeneralist and specialist species010603 evolutionary biology01 natural sciencesAfrican elephantGeographyAsian elephantvisual_artbiology.animalvisual_art.visual_art_mediumIsotope-ratio mass spectrometryEcology Evolution Behavior and Systematics0105 earth and related environmental sciencesNature and Landscape ConservationBiological Conservation
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Sclerochronology - a highly versatile tool for mariculture and reconstruction of life history traits of the queen conch, Strombus gigas (Gastropoda)

2009

International audience; The queen conch, Strombus gigas, is an important fisheries resource in the Western Tropical Atlantic. In order to maintain harvesting success, improve fisheries management and contribute to mariculture pursuits, a detailed understanding of the life history traits of this species is required. Traditionally, this has been achieved by tedious and time-consuming long-term field observations. This study presents a highly versatile and rapid technique to estimate the timing and rate of shell growth based on sclerochronology. The Belizean S. gigas specimens (N = 2) from the offshore atoll, Glovers Reef, reached their final shell size (maximum shell height: 22.7 and 23.5 cm,…

0106 biological sciencesQueen conch010504 meteorology & atmospheric sciencesAtollAquatic Science01 natural sciencesConchSclerochronologyGastropoda14. Life underwaterMolluscaReef0105 earth and related environmental sciencesStable isotopesgeographygeography.geographical_feature_categorybiologyWhorl (mollusc)010604 marine biology & hydrobiologyShellfisheries managementGrowth patternsLife history traitsbiology.organism_classificationOceanographyStrombus[SDE]Environmental Sciences
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Suppressiveness of 18 composts against 7 pathosystems : variability in pathogen response

2006

International audience; Compost is often reported as a substrate that is able to suppress soilborne plant pathogens, but suppression varies according to the type of compost and pathosystem. Reports often deal with a single pathogen while in reality crops are attacked by multiple plant pathogens. The goal of the present study was to evaluate the disease suppression ability of a wide range of composts for a range of plant pathogens. This study was conducted by a consortium of researchers from several European countries. Composts originated from different countries and source materials including green and yard waste, straw, bark, biowaste and municipal sewage. Suppressiveness of compost-amende…

0106 biological sciencesRHIZOCTONIA SOLANIpotting mixesPHYTOPHTHORA CINNAMOMIDamping offSoil Sciencecontainer mediaPhytophthora cinnamomi[SDV.SA.SDS]Life Sciences [q-bio]/Agricultural sciences/Soil studyWageningen UR Glastuinbouw01 natural sciencesMicrobiologyRhizoctonia solanidamping-offDISEASE SUPPRESSIVENESSSBiologische bedrijfssystemenFusarium oxysporumwasteVerticillium dahliaepythium-ultimumCOMPOSTFUSARIUM OXYSPORUMBiological Farming Systems2. Zero hungerDISEASE PREDICTIONbiologysoilborne plant-pathogensWageningen UR Greenhouse Horticulturephytophthora-cinnamomiSPATHIPHYLUM CYLINDROCLADIUM04 agricultural and veterinary sciencesPhytophthora nicotianaebiology.organism_classificationPE&RCPotting soilSOILBORNE PLANT PATHOGENSPythium ultimumPHYTOPHTHORA NICOTIANAEAgronomyorganic amendments040103 agronomy & agriculturesoil microbial communities0401 agriculture forestry and fisheriesVERTICILLIUM DAHLIAE010606 plant biology & botanyrhizoctonia-solani
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Impact of vector dispersal and host-plant fidelity on the dissemination of an emerging plant pathogen

2012

International audience; Dissemination of vector-transmitted pathogens depend on the survival and dispersal of the vector and the vector's ability to transmit the pathogen, while the host range of vector and pathogen determine the breath of transmission possibilities. In this study, we address how the interaction between dispersal and plant fidelities of a pathogen (stolbur phytoplasma tuf-a) and its vector (Hyalesthes obsoletus: Cixiidae) affect the emergence of the pathogen. Using genetic markers, we analysed the geographic origin and range expansion of both organisms in Western Europe and, specifically, whether the pathogen's dissemination in the northern range is caused by resident vecto…

0106 biological sciencesRange (biology)Population DynamicsPopulation geneticslcsh:Medicine01 natural sciencessanté des plantesphytoplasme du stolburPhyletic PatternsVitisUrtica dioicahyalesthes obsoletuslcsh:SciencePathogenpathologie végétalePhylogenybactérie0303 health sciencesMultidisciplinaryEcologyEcologystolburUrtica dioicaAgricultureBiodiversityHost-Pathogen InteractionPhytoplasmaépidémiologieinsecte vecteuragent pathogèneResearch ArticleDNA BacterialGenetic MarkersPhytoplasmaEvolutionary ProcessesPhytopathology and phytopharmacyEmergenceBiologyDNA MitochondrialMicrobiologyVector Biology03 medical and health sciencesmollicute phytopathogèneIntegrated ControlintéractionEvolutionary SystematicsParasite EvolutionBiologyHybridizationMicrobial Pathogens030304 developmental biologyPlant DiseasesEvolutionary BiologyPopulation BiologyHost (biology)lcsh:Rtransmission de la maladiebiology.organism_classificationPhytopathologie et phytopharmacievariation génétiqueOrganismal Evolution[SDV.BV.PEP]Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacyEmerging Infectious DiseasesVector (epidemiology)Microbial EvolutionBiological dispersallcsh:QParasitologyPest ControlPopulation EcologyZoologyEntomologyPopulation Genetics010606 plant biology & botanyCoevolution
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Hydrogen isotopes reveal evidence of migration of Miniopterus schreibersii in Europe

2020

Abstract Background The Schreiber’s bat, Miniopterus schreibersii, is adapted to long-distance flight, yet long distance movements have only been recorded sporadically using capture-mark-recapture. In this study, we used the hydrogen isotopic composition of 208 wing and 335 fur specimens from across the species' European range to test the hypothesis that the species migrates over long distances. Results After obtaining the hydrogen isotopic composition (δ2H) of each sample, we performed geographic assignment tests by comparing the δ2H of samples with the δ2H of sampling sites. We found that 95 bats out of 325 showed evidence of long-distance movement, based on the analysis of either fur or …

0106 biological sciencesRange (biology)Species distributionChiroptera; Climate change; Long-distance migration; Movement ecology; Schreiber's bat; Stable isotope; Wildlife conservation; Animals; Europe; Hydrogen; Isotopes; ChiropteraSchreiber’s bat010603 evolutionary biology01 natural sciencesMovement ecologyIsotopesChiropteraClimate changeAnimalsQH540-549.5Ecology Evolution Behavior and SystematicsGeneral Environmental ScienceWildlife conservationSchreiber's batEcologyAnimalIsotopeEcology010401 analytical chemistryLong-distance migrationStable isotopeIsotopic composition0104 chemical sciencesEuropeEastern europeanMiniopterus schreibersiiGeographyWildlife conservationResearch ArticleHydrogenBMC Ecology
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