Search results for "USE"

showing 10 items of 21926 documents

Using metabarcoding to reveal and quantify plant-pollinator interactions.

2016

AbstractGiven the ongoing decline of both pollinators and plants, it is crucial to implement effective methods to describe complex pollination networks across time and space in a comprehensive and high-throughput way. Here we tested if metabarcoding may circumvent the limits of conventional methodologies in detecting and quantifying plant-pollinator interactions. Metabarcoding experiments on pollen DNA mixtures described a positive relationship between the amounts of DNA from focal species and the number of trnL and ITS1 sequences yielded. The study of pollen loads of insects captured in plant communities revealed that as compared to the observation of visits, metabarcoding revealed 2.5 tim…

0106 biological sciences0301 basic medicineInsectaDNA PlantPollinationmedia_common.quotation_subjectInsectBiologymedicine.disease_cause010603 evolutionary biology01 natural sciencesArticle03 medical and health sciencesSpecies SpecificityPollinatorPollenmedicine[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisAnimalsDNA Barcoding TaxonomicPollinationPlant Physiological Phenomenamedia_common[SDV.GEN]Life Sciences [q-bio]/Genetics[ SDE.BE ] Environmental Sciences/Biodiversity and EcologyMultidisciplinaryCommunityEcologyPlant communitySequence Analysis DNAPlants15. Life on landEcological genetics030104 developmental biologyTaxonPollen[SDE.BE]Environmental Sciences/Biodiversity and Ecology[ SDV.GEN ] Life Sciences [q-bio]/Genetics[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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Novel mutations in the voltage-gated sodium channel of pyrethroid-resistant Varroa destructor populations from the Southeastern USA

2016

The parasitic mite Varroa destructor has a significant worldwide impact on bee colony health. In the absence of control measures, parasitized colonies invariably collapse within 3 years. The synthetic pyrethroids tau-fluvalinate and flumethrin have proven very effective at managing this mite within apiaries, but intensive control programs based mainly on one active ingredient have led to many reports of pyrethroid resistance. In Europe, a modification of leucine to valine at position 925 (L925V) of the V. destructor voltage-gated sodium channel was correlated with resistance, the mutation being found at high frequency exclusively in hives with a recent history of pyrethroid treatment. Here,…

0106 biological sciences0301 basic medicineInsecticidesVeterinary medicineGene Identification and Analysislcsh:MedicineMicrobiologiaVoltage-Gated Sodium ChannelsFlumethrinmedicine.disease_causeBiochemistry01 natural sciencesAbellesInsecticide Resistancechemistry.chemical_compoundMethioninePyrethrinsÀcarsDestructorAmino Acidslcsh:ScienceMitesMutationMultidisciplinaryPyrethroidbiologyOrganic CompoundsGeneral MedicineBeesSoutheastern United StatesInsectsChemistryPhysical SciencesInsect ProteinsGeneral Agricultural and Biological SciencesResearch ArticleArthropodaApiaryParàsitsVarroidaeGeneral Biochemistry Genetics and Molecular Biology03 medical and health sciencesLeucineparasitic diseasesGeneticsMitemedicineAnimalsPoint MutationSulfur Containing Amino AcidsIsoleucineMutation DetectionAllelesbusiness.industryPoint mutationOrganic Chemistrylcsh:ROrganismsChemical CompoundsBiology and Life SciencesProteinsbiology.organism_classificationInvertebratesHymenopteraBiotechnology010602 entomology030104 developmental biologyAliphatic Amino AcidschemistryGenetic LociVarroa destructorMutationlcsh:Qbusiness
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Food limitation constrains host immune responses to nematode infections.

2016

Trade-offs in the allocation of finite-energy resources among immunological defences and other physiological processes are believed to influence infection risk and disease severity in food-limited wildlife populations. However, this prediction has received little experimental investigation. Here we test the hypothesis that food limitation impairs the ability of wild field voles ( Microtus agrestis ) to mount an immune response against parasite infections. We conducted a replicated experiment on vole populations maintained in large outdoor enclosures during boreal winter, using food supplementation and anthelmintic treatment of intestinal nematodes. Innate immune responses against intestina…

0106 biological sciences0301 basic medicineIntestinal parasitemedicine.disease_cause010603 evolutionary biology01 natural sciencesivermectin03 medical and health sciencesImmune systemmedicineParasite hostingMicrotuseco-immunologyInnate immune systembiologydigestive oral and skin physiologybiology.organism_classificationAgricultural and Biological Sciences (miscellaneous)3. Good healthvole030104 developmental biologyNematodefield experimentInfectious disease (medical specialty)parasiteImmunologyta1181VoleGeneral Agricultural and Biological SciencesPathogen BiologyBiology letters
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Characterization of two groups of Spodoptera exigua Hübner (Lepidoptera: Noctuidae) C-type lectins and insights into their role in defense against th…

2018

Insect innate immunity relies on numerous soluble and membrane-bound receptors, named pattern recognition proteins (PRPs), which enable the insect to recognize pathogen-associated molecular patterns. C-type lectins are among the best-studied PRPs and constitute the most diverse family of animal lectins. Here we have characterized two groups of Spodoptera exigua C-type lectins that differ in their phylogeny, domain architecture, and expression pattern. One group includes C-type lectins with similar characteristics to other lepidopteran lectins, and a second group includes bracoviral-related lectins (bracovirus-like lectins, Se-BLLs) recently acquired by horizontal gene transfer. Subsequently…

0106 biological sciences0301 basic medicineJcDVS. frugiperdaPhysiologyparvovirusesmedia_common.quotation_subjectInsectSpodopteraSpodoptera01 natural sciencesBiochemistrydensovirusLepidoptera genitalia03 medical and health sciencesSpecies SpecificityPhylogeneticsExiguaAnimalsC-type lectinsLectins C-Typeinnate immunityPhylogenymedia_commonGeneticsinsect immunityInnate immune systembiologyfungiDensovirinaeGeneral MedicineSequence Analysis DNAbiology.organism_classificationinfectionbracovirus010602 entomology030104 developmental biologyInsect ScienceLarvaNoctuidaeInsect Proteinsinsect[SDE.BE]Environmental Sciences/Biodiversity and EcologyDensovirusimmunitéS. exiguapathogenagent pathogèneArchives of insect biochemistry and physiology
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Co-infection with iflaviruses influences the insecticidal properties of Spodoptera exigua multiple nucleopolyhedrovirus occlusion bodies: Implication…

2017

Biological insecticides based on Spodoptera exigua multiple nucleopolyhedrovirus (SeMNPV) can efficiently control S. exigua larvae on field and greenhouse crops in many parts of the world. Spanish wild populations and laboratory colonies of S. exigua are infected by two iflaviruses (SeIV-1 and SeIV-2). Here we evaluated the effect of iflavirus co-infection on the insecticidal characteristics of SeMNPV occlusion bodies (OBs). Overall, iflavirus co-inoculation consistently reduced median lethal concentrations (LC50) for SeMNPV OBs compared to larvae infected with SeMNPV alone. However, the speed of kill of SeMNPV was similar in the presence or absence of the iflaviruses. A reduction of the we…

0106 biological sciences0301 basic medicineLife CyclesInsecticidesPhysiologyBiosecuritySeMNPV occlusion bodieslcsh:MedicineInsectPathogenesisPathology and Laboratory MedicineWeight Gain01 natural sciencesIflavirus co-infectionLarvaeInvertebrate GenomicsMedicine and Health Scienceslcsh:Sciencemedia_commonLarvaMultidisciplinaryCoinfectionAgricultureGenomicsInsectsPhysiological ParametersAgrochemicalsResearch ArticleArthropodamedia_common.quotation_subjectBiologySpodopteraSpodopteraMicrobiologyLepidoptera genitalia03 medical and health sciencesExtraction techniquesExiguaGeneticsAnimalsPest Control BiologicalBiological InsecticidesInoculationlcsh:RfungiBody WeightOrganismsBiology and Life SciencesPesticidebiology.organism_classificationInvertebratesRNA extractionNucleopolyhedrovirusesResearch and analysis methods010602 entomology030104 developmental biologyBiological insecticidesAnimal Genomicslcsh:QDevelopmental BiologyPLoS ONE
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Open data and digital morphology

2017

International audience; Over the past two decades, the development of methods for visualizing and analysing specimens digitally, in three and even four dimensions, has transformed the study of living and fossil organisms. However, the initial promise that the widespread application of such methods would facilitate access to the underlying digital data has not been fully achieved. The underlying datasets for many published studies are not readily or freely available, introducing a barrier to verification and reproducibility, and the reuse of data. There is no current agreement or policy on the amount and type of data that should be made available alongside studies that use, and in some cases…

0106 biological sciences0301 basic medicineLife Sciences & Biomedicine - Other TopicsDYNAMICSComputer scienceDatasets as TopicReuse01 natural sciencesFOSSILSthree-dimensional modelsNaturvetenskapData CurationGeneral Environmental ScienceEcologypalaeontology[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]70General Medicine11 Medical And Health SciencesCCbiomechanics Keywords: digital dataOpen dataPerspectiveComputer data storage[SDU.STU.PG]Sciences of the Universe [physics]/Earth Sciences/PaleontologyGeneral Agricultural and Biological SciencesNatural SciencesLife Sciences & BiomedicineDatasets as Topic1001TISSUESphenotypeBest practiceDigital dataLibrary science25Environmental Sciences & Ecology010603 evolutionary biologyBiological Science DisciplinesGeneral Biochemistry Genetics and Molecular BiologyQA76functional analysisSet (abstract data type)03 medical and health sciencesPALEONTOLOGYBiologySubject Category: Morphology and biomechanics Subject Areas: evolutionvisualizationdigital dataEvolutionary BiologyScience & TechnologyTOMOGRAPHIC MICROSCOPYMorphology and BiomechanicsGeneral Immunology and Microbiologybusiness.industryResearchQHReproducibility of Resultscomputed tomographyPERFORMANCE06 Biological Sciences144Data scienceEVOLUTIONVisualization030104 developmental biologyVISUALIZATION07 Agricultural And Veterinary SciencesbusinessProceedings of the Royal Society B: Biological Sciences
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Nitrous oxide effluxes from plants as a potentially important source to the atmosphere

2018

The global budget for nitrous oxide (N2 O), an important greenhouse gas and probably dominant ozone-depleting substance emitted in the 21st century, is far from being fully understood. Cycling of N2 O in terrestrial ecosystems has traditionally exclusively focused on gas exchange between the soil surface (nitrification-denitrification processes) and the atmosphere. Terrestrial vegetation has not been considered in the global budget so far, even though plants are known to release N2 O. Here, we report the N2 O emission rates of 32 plant species from 22 different families measured under controlled laboratory conditions. Furthermore, the first isotopocule values (δ15 N, δ18 O and δ15 Nsp ) of …

0106 biological sciences0301 basic medicineLightNitrogenPhysiologyNitrous OxidePlant Science01 natural sciencesAtmosphere03 medical and health scienceschemistry.chemical_compoundSpecies SpecificityEcosystemAtmosphereStable isotope ratioTemperatureVegetationNitrous oxideCarbon DioxidePlants030104 developmental biologychemistryIsotope LabelingGreenhouse gasEnvironmental chemistryEnvironmental scienceTerrestrial ecosystemCycling010606 plant biology & botanyNew Phytologist
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Changes in lipid and carotenoid metabolism in Chlamydomonas reinhardtii during induction of CO2-concentrating mechanism: Cellular response to low CO2…

2020

Photosynthetic organisms strictly depend on CO2 availability and the CO2:O2 ratio, as both CO2/O2 compete for catalytic site of Rubisco. Green alga Chlamydomonas reinhardtii, can overcome CO2 shortage by inducing CO2-concentrating mechanism (CCM). Cells transferred to low-CO2 are subjected to light-driven oxidative stress due to decrease in the electron sink. Response to environmental perturbations is mediated to some extent by changes in the lipid and carotenoid metabolism. We thus hypothesize that when cells are challenged with changes in CO2 availability, changes in the lipidome and carotenoids profile occur. These changes expected to be transient, when CCM is activated, CO2 limitation w…

0106 biological sciences0301 basic medicineLow-CO stressChlamydomonas reinhardtiimedicine.disease_cause01 natural sciences03 medical and health sciencesCarotenogenesisLipid dropletmedicineBetaine lipidsCarotenoidchemistry.chemical_classificationCCMbiologyRuBisCOChlamydomonasBiochemistry and Molecular BiologyLipid metabolismLipidomebiology.organism_classificationLipid droplets030104 developmental biologyMicrobiology (Microbiology in the medical area to be 30109)chemistryBiochemistryXanthophyllbiology.proteinAgronomy and Crop ScienceOxidative stressBiokemi och molekylärbiologi010606 plant biology & botany
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Extraction and Analysis of Carotenoids from Escherichia coli in Color Complementation Assays

2017

A common method to investigate the function of genes putatively involved in carotenoid biosynthesis is the so called color complementation assay in Escherichia coli (see, e.g., Cunningham and Gantt, 2007). In this assay, the gene under investigation is expressed in E. coli strains genetically engineered to synthesize potential carotenoid substrates, followed by analysis of the pigment changes in the carotenogenic bacteria via high-performance liquid chromatography (HPLC). Two crucial steps in this method are (i) the quantitative extraction of the carotenoids out of E. coli and (ii) the reproducible and complete separation of the pigments by HPLC. Here, we present a protocol for the extracti…

0106 biological sciences0301 basic medicineLuteinStrategy and Managementmedicine.disease_cause01 natural sciencesIndustrial and Manufacturing Engineering03 medical and health scienceschemistry.chemical_compoundProtein-fragment complementation assayMethods ArticlemedicineCarotenoidEscherichia colichemistry.chemical_classificationChromatographyMechanical EngineeringExtraction (chemistry)Metals and Alloysfood and beveragesComplementationZeaxanthin030104 developmental biologychemistryXanthophyll010606 plant biology & botanyBIO-PROTOCOL
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Direct and correlated responses to bi-directional selection on pre-adult development time in Drosophila montana.

2019

Selection experiments offer an efficient way to study the evolvability of traits that play an important role in insects’ reproduction and/or survival and to trace correlations and trade-offs between them. We have exercised bi-directional selection on Drosophila montana flies’ pre-adult development time under constant light and temperature conditions for 10 generations and traced the indirect effects of this selection on females’ diapause induction under different day lengths, as well as on the body weight and cold tolerance of both sexes. Overall, selection was successful towards slow, but not towards fast development. However, all fast selection line replicates showed at the end of selecti…

0106 biological sciences0301 basic medicineMalePhysiologymahlakärpäsetmedia_common.quotation_subjectAcclimatizationPhotoperiodCircadian clockevoluutiopre-adult developmental timeZoologyreproductive diapauseDiapauseBiologyDiapause Insect01 natural sciencestalvehtiminenbi-directional selection experimentbody weight03 medical and health scienceskylmänkestävyysControl lineAnimalsCircadian rhythmpaino (fysiikka)Selection GeneticSelection (genetic algorithm)media_commonvuorokausirytmiluonnonvalintaDirectional selectionBody WeightPupacold tolerancecritical day lengthEvolvabilityCold Temperature010602 entomology030104 developmental biologyInsect ScienceLarvata1181DrosophilaFemaleReproductionJournal of insect physiology
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