Search results for "aDNA"

showing 10 items of 65 documents

The spread of steppe and Iranian-related ancestry in the islands of the western Mediterranean

2020

Steppe-pastoralist-related ancestry reached Central Europe by at least 2500 bc, whereas Iranian farmer-related ancestry was present in Aegean Europe by at least 1900 bc. However, the spread of these ancestries into the western Mediterranean, where they have contributed to many populations that live today, remains poorly understood. Here, we generated genome-wide ancient-DNA data from the Balearic Islands, Sicily and Sardinia, increasing the number of individuals with reported data from 5 to 66. The oldest individual from the Balearic Islands (~2400 bc) carried ancestry from steppe pastoralists that probably derived from west-to-east migration from Iberia, although two later Balearic individ…

0301 basic medicineMediterranean climateSteppePastoralismPopulation geneticsgovernment.political_districtSettore BIO/08 - AntropologiaIranancient-DNA western mediterranean islands populationaDNA Human Ancient migrations Western Mediterranean Basin Steppe pastoralists Anthropology03 medical and health sciences0302 clinical medicineBronze AgeHumansDNA AncientSicilyEcology Evolution Behavior and SystematicsIslandsBalearic islandsgeography.geographical_feature_categoryEcologyAfrica; anthropology; emigration and immigration; Europe; humans; Iran; islands; Sicily; Spain; agriculture; DNA ancient; genome-wide association studyancientAgricultureDNAChalcolithicEmigration and Immigrationwestern mediterranean islands populationhumanitiesEuropeAncient DNA ; steppe ancestry ; western Mediterranean030104 developmental biologyAncient DNAGeographySpainAnthropologyAfricagovernmentancient-DNAEthnology030217 neurology & neurosurgeryGenome-Wide Association Study
researchProduct

A 5,000-year-old hunter-gatherer already plagued by Yersinia pestis.

2021

Summary A 5,000-year-old Yersinia pestis genome (RV 2039) is reconstructed from a hunter-fisher-gatherer (5300–5050 cal BP) buried at Riņņukalns, Latvia. RV 2039 is the first in a series of ancient strains that evolved shortly after the split of Y. pestis from its antecessor Y. pseudotuberculosis ∼7,000 years ago. The genomic and phylogenetic characteristics of RV 2039 are consistent with the hypothesis that this very early Y. pestis form was most likely less transmissible and maybe even less virulent than later strains. Our data do not support the scenario of a prehistoric pneumonic plague pandemic, as suggested previously for the Neolithic decline. The geographical and temporal distributi…

0301 basic medicinePneumonic plagueaDNAQH301-705.5Yersinia pestisZoologyGeneral Biochemistry Genetics and Molecular Biologyhunter-gathererPrehistory03 medical and health sciences0302 clinical medicinemedicineHumansBiology (General)Hunter-gathererPhylogenyLikelihood FunctionsPlaguebiologyPhylogenetic treeZoonosiszoonosismedicine.diseasebiology.organism_classificationLatvia030104 developmental biologyYersinia pestis030217 neurology & neurosurgeryCell reports
researchProduct

Ortervirales: New Virus Order Unifying Five Families of Reverse-Transcribing Viruses

2018

International audience; Reverse-transcribing viruses, which synthesize a copy of genomic DNA from an RNA template, are widespread in animals, plants, algae, and fungi (1, 2). This broad distribution suggests the ancient origin(s) of these viruses, possibly [...]

0301 basic medicineS1retrovirusesviruses[SDV]Life Sciences [q-bio]ImmunologyretroviridaeMESH: Reverse TranscriptionL73 - Maladies des animauxVirus Replication[SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomyMicrobiologyVirusbelpaoviridaeMESH: Viruses03 medical and health sciencesVirologyinternational committee on taxonomy of viruses (ICTV)Metaviridaevirus classificationLetter to the EditorVirus classificationGeneticsTy3/Gypsy and Ty1/Copia LTR retrotransposonscaulimoviridaevirus evolutionbiologyfungiMESH: Virus ReplicationRNAPseudoviridaeReverse Transcriptionbiology.organism_classificationMESH: Caulimoviridaegenomic DNA030104 developmental biologyMESH: RetroviridaeMESH: HepadnaviridaeInsect ScienceViral evolutionhepadnaviridaeBelpaoviridae; Caulimoviridae; Hepadnaviridae; International Committee on Taxonomy of Viruses (ICTV); Metaviridae; Pseudoviridae; Retroviridae; Ty3/Gypsy and Ty1/Copia LTR retrotransposons; retroviruses; virus classification; virus evolutionViruses[SDV.MP.VIR]Life Sciences [q-bio]/Microbiology and Parasitology/VirologymetaviridaeCaulimoviridaepseudoviridae
researchProduct

Beyond malaria: The inhibition of viruses by artemisinin-type compounds

2018

Abstract Natural products represent valuable chemical scaffolds for drug development. A recent success story in this context was artemisinin, which is not only active against malaria but also to other diseases. This raised the interest of artemisinin's potential for drug repurposing. On the present review, we give an overview on artemisinin's antiviral activity. There is good in vitro and in vivo evidence for the activity of artemisinin and its derivatives against DNA viruses of the Herpesviridae and Hepadnaviridae families such as cytomegaloviruses, human herpesvirus 6, herpes simplex viruses 1 and 2, Epstein-Barr virus and Hepatitis B virus. The evidence is weaker for Polyomaviruses and p…

0301 basic medicinevirusesPhytochemicalsArtemisia annuaBioengineeringmedicine.disease_causeAntiviral AgentsApplied Microbiology and BiotechnologyVirusHerpesviridae03 medical and health scienceschemistry.chemical_compoundparasitic diseasesmedicineAnimalsHumansRNA VirusesArtemetherArtemisininHepatitis B virusbiologyDNA Virusesbiology.organism_classificationVirologyArtemisinins030104 developmental biologychemistryHepadnaviridaeVirus DiseasesArtesunateBiotechnologymedicine.drugBiotechnology Advances
researchProduct

Use of the polymerase chain reaction to demonstrate hepatitis B virus DNA in serum of children with chronic hepatitis B.

1992

The polymerase chain reaction was used to investigate the presence of hepatitis B virus DNA in sera of 61 children with chronic hepatitis B and negative results on dot biot hybridization tests. Our results demonstrate that most chronic carriers of hepatitis B surface antigen in childhood have hepatitis B virus DNA detectable by polymerase chain reaction in their serum and must be considered infectious.

AdolescentHepatitis B virus DNA polymeraseHepatitis B virus DNAmedicine.disease_causePolymerase Chain ReactionVirusHepatitis B virus PRE betalaw.inventionChronic hepatitislawMedicineHumansHepatitis B e AntigensHepatitis B AntibodiesChildPolymerase chain reactionHepatitis B virusbiologybusiness.industryInfantbiology.organism_classificationHepatitis BVirologyHepadnaviridaeChild PreschoolPediatrics Perinatology and Child HealthChronic DiseaseDNA ViralbusinessThe Journal of pediatrics
researchProduct

Active immunization of homosexual men using a recombinant hepatitis B vaccine

1989

Twenty homosexual men [13 anti-human immunodeficiency virus (HIV)-positive, seven anti-HIV negative] without HBsAg, anti-HBs, and anti-HBc were vaccinated with three 20 micrograms doses of a recombinant hepatitis B vaccine. All anti-HIV-positive homosexuals were nonresponders independent of the initial number of CD4-positive cells. Among seven anti-HIV-negative individuals, five responded. After three doses of the vaccine, CD4-positive cells fell in anti-HIV positive individuals by 22.4%. A similar fall in CD4-positive cells of an average 24.9% was noted in 17 matching, but nonvaccinated, anti-HIV-positive homosexuals. The study indicates that the efficacy of vaccination in anti-HIV-positiv…

AdultCD4-Positive T-LymphocytesMaleViral Hepatitis VaccinesHepatitis B virusHBsAgAdolescentmedicine.disease_causeActive immunizationVirusVirologyHIV Seropositivitymental disordersHumansMedicineHepatitis B AntibodiesHepatitis B virusVaccinesVaccines SyntheticHepatitis B Surface Antigensbiologybusiness.industryvirus diseasesHomosexualityMiddle AgedHepatitis Bbiology.organism_classificationmedicine.diseaseVirologyBlood Cell CountVaccinationInfectious DiseasesHepadnaviridaeImmunologybiology.proteinAntibodybusinesspsychological phenomena and processesJournal of Medical Virology
researchProduct

Smouldering hepatitis B virus replication in patients with chronic liver disease and hepatitis delta virus superinfection

1991

Hepatitis B virus deoxyribonucleic acid (HBV-DNA) was studied by Southern blot analysis in liver biopsy specimens from 75 HBsAg-positive patients with chronic liver disease living in southern Italy. Twenty-seven of the patients were hepatitis delta virus (HDV) superinfected. Intrahepatic HBV-DNA was detected in 54 (72%) patients, 32 (59%) of them with replicative forms. The presence of replicative forms was directly related to liver HBcAg and inversely related to liver HDAg, as shown by multivariate analysis. However, 14 patients with intrahepatic HBV-DNA non-replicative pattern and about half of HDV-infected patients were liver HBcAg and/or serum HBV-DNA positive, mostly in low amounts. Hi…

AdultDNA ReplicationMaleHepatitis B virusAdolescentvirusesPopulationVirus ReplicationChronic liver diseasemedicine.disease_causeVirusmedicineHumansChildeducationAgedHepatitis B viruseducation.field_of_studyHepatitis B Surface AntigensHepatologymedicine.diagnostic_testbiologyLiver Diseasesvirus diseasesMiddle Agedbiochemical phenomena metabolism and nutritionbiology.organism_classificationmedicine.diseaseVirologyHepatitis Ddigestive system diseasesBlotting SouthernHBcAgLiverHepadnaviridaeChild PreschoolLiver biopsySuperinfectionChronic DiseaseDNA ViralImmunologyHepatitis Delta VirusJournal of Hepatology
researchProduct

Selection of a precore mutant after vertical transmission of different hepatitis B virus variants is correlated with fulminant hepatitis in infants

1995

The incidence of perinatal transmission of hepatitis B virus (HBV) depends on the HBeAg/anti-HBe status of the mother. While children of HBeAg-positive mothers have a 90% probability of acquiring a chronic hepatitis B virus carrier state, babies of anti-HBe-positive mothers are more likely to develop fulminant hepatitis within the first 3 to 4 months of life. There is evidence that precore (pre-C) mutations of the HBV can be associated with fulminant hepatitis. The pre-C region was therefore examined in sera from nine infants with fulminant hepatitis after vertical transmission, one HBeAg-positive and seven anti-HBe-positive mothers by polymerase chain reaction (PCR) and direct sequence ana…

AdultHepatitis B virusAdolescentMolecular Sequence DataPopulationmedicine.disease_causeVirusPregnancyVirologymedicineHumansHepatitis B e AntigensFulminant hepatitiseducationHepatitis B viruseducation.field_of_studyBase Sequencebiologyvirus diseasesHepatitis BHepatitis Bmedicine.diseasebiology.organism_classificationVirologyInfectious Disease Transmission Verticaldigestive system diseasesInfectious DiseasesHepadnaviridaeHBeAgDNA ViralMutationImmunologyFemaleViral diseaseSequence AnalysisJournal of Medical Virology
researchProduct

HBV-DNA suppression and disease course in HBV cirrhosis patients on long-term lamivudine therapy

2005

In hepatitis B virus (HBV) cirrhosis patients on long-term lamivudine (LAM), the relationships between HBV suppression, development of viral resistance and disease outcome are unclear. We analysed the dynamic of serum HBV-DNA and its relationship with the clinical course of 59 patients (52 males, mean age 51.4 ±8.4 years, 12 HBeAg positive and 47 HBeAg negative, and 57 genotype D and two genotype A) with cirrhosis (45 in Child-Turcotte-Pugh class A) and high levels of serum HBV-DNA (median 14.7x107 genomes/ml) treated with LAM [median (range): 44 (15–78) months]. A total of 50 patients (84.7%) achieved a virological response (serum HBV-DNA negative by PCR) during the first 6 months of ther…

AdultLiver CirrhosisMaleHepatitis B virusCirrhosisHBV DNA Lamivudine Therapy suppression HBV diseasemedicine.disease_causeVirus ReplicationAntiviral AgentsVirusDrug Administration ScheduleDisease courseCohort StudiesOrthohepadnavirusmedicineHumansPharmacology (medical)AgedPharmacologyHepatitis B virusbiologyReverse-transcriptase inhibitorLamivudineMiddle Agedbiology.organism_classificationmedicine.diseaseHepatitis BVirologydigestive system diseasesInfectious DiseasesHepadnaviridaeLamivudineDNA ViralMutationFemalemedicine.drug
researchProduct

Quantitative and functional analysis of core-specific T-helper cell and CTL activities in acute and chronic hepatitis B

2008

Aims/background CD4+ T-helper cell (Th) responses to hepatitis B virus (HBV) core antigen (HBc) are increased during exacerbations in acute and chronic hepatitis B (AHB, CHB) and might influence the induction of CD8+ cytotoxic T lymphocytes (CTL) that are important for viral clearance. Methods HBc-specific proliferative responses and cytokine release of blood mononuclear cells (PBMC) were studied in patients with AHB or CHB, as well as responders and non-responders to interferon-alpha treatment (IFN-R, IFN-NR), by [3H]-thymidine-uptake, enzyme-linked immunosorbent assay (ELISA) and Elispot assay and were compared to peptide HBc18 27-specific CTL precursor frequencies among CD8+ T cells deri…

AdultMaleAdolescentLymphocyte Activationmedicine.disease_causePolymerase Chain ReactionHepatitis B ChronicmedicineHumansCytotoxic T cellHepatitis B virusHepatologybiologybusiness.industryELISPOTInterferon-alphaT-Lymphocytes Helper-InducerT helper cellMiddle AgedHepatitis Bbiology.organism_classificationmedicine.diseaseHepatitis B Core AntigensVirologyCTL*medicine.anatomical_structureHepadnaviridaeAcute DiseaseImmunologyLeukocytes MononuclearFemalebusinessCD8T-Lymphocytes CytotoxicLiver
researchProduct