Search results for "alkane"

showing 10 items of 162 documents

Pressure dependence in the methyl vinyl ketone + OH and methacrolein + OH oxidation reactions: an electronic structure study.

2005

High-level electronic structure calculations were carried out for the study of the reaction pathways in the OH-initiated oxidations of methyl vinyl ketone (MVK) and methacrolein (MACR). For the two conformers of MVK (called synperiplanar and antiperiplanar), the addition channels of OH to the terminal and central carbon atom of the double bond dominate the overall rate constant, whereas the abstraction of the methyl hydrogen atoms has no significant kinetic role. In the case of MACR, only the antiperiplanar conformer is important in its reactivity. In addition, the lower Gibbs free energy barrier for MACR corresponds to the aldehydic hydrogen abstraction reaction, which will be somewhat mor…

chemistry.chemical_classificationDouble bondChemistryHydroxyl RadicalMethacroleinElectronsHydrogen atom abstractionPhotochemistryAtomic and Molecular Physics and OpticsButanonesGibbs free energysymbols.namesakechemistry.chemical_compoundReaction rate constantModels ChemicalAlkane stereochemistryMethyl vinyl ketonesymbolsPressureOrganic chemistryThermodynamicsReactivity (chemistry)Physical and Theoretical ChemistryAcroleinOxidation-ReductionChemphyschem : a European journal of chemical physics and physical chemistry
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Synthesis and biological evaluation of the new ring system benzo[f]pyrimido[1,2-d][1,2,3]triazolo[1,5-a][1,4]diazepine and its cycloalkane and cycloa…

2021

Derivatives of the new ring system benzo[f]pyrimido[1,2-d][1,2,3]triazolo[1,5-a][1,4]diazepinone and its cycloalkane and cycloalkene condensed analogues have been conveniently synthesized through a three-step reaction sequence. An atom-economical, one-pot, three-step cascade process engaging five reactive centers (amide, amine, carbonyl, azide, and alkyne) has been performed for the synthesis of alicyclic derivatives of quinazolinotriazolobenzodiazepine using cyclohexane, cyclohexene, and norbornene β-amino amides. The stereochemistry and relative configurations of the synthesized compounds were determined by 1D and 2D NMR spectroscopy and X-ray crystallography. The reaction was also perfor…

chemistry.chemical_classificationGeneral Chemical EngineeringCyclohexeneAlkyneGeneral ChemistryMedicinal chemistrychemistry.chemical_compoundCycloalkaneDiazepinechemistryAmideAzideCycloalkeneNorborneneRSC Advances
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Electrical conductivity and permittivity of water-AOT-n-heptane microemulsions

1995

Measurements of the electrical conductivity and of the complex permittivity of water-sodium bis(2-ethylhexyl) sulfosuccinate (AOT)-n-heptane microemulsions are reported. The experimental results are rationalized in terms of a hopping mechanism of AOT anions within clusters of reversed micelles. The dependence of the hopping rate and of the cluster dimensions upon the ratio [water]/[AOT] and temperature is discussed.

chemistry.chemical_classificationPermittivityAlkaneHeptaneBiophysicsAnalytical chemistryConductivityBiochemistryMicellechemistry.chemical_compoundHydrocarbonchemistryElectrical resistivity and conductivityOrganic chemistryMicroemulsionPhysical and Theoretical ChemistryMolecular BiologyJournal of Solution Chemistry
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Coupling of the guanosine glycosidic bond conformation and the ribonucleotide cleavage reaction: implications for barnase catalysis.

2007

To examine the possible relationship of guanine-dependent GpA conformations with ribonucleotide cleavage, two potential of mean force (PMF) calculations were performed in aqueous solution. In the first calculation, the guanosine glycosidic (Gχ) angle was used as the reaction coordinate, and computations were performed on two GpA ionic species: protonated (neutral) or deprotonated (negatively charged) guanosine ribose O2 ′. Similar energetic profiles featuring two minima corresponding to the anti and syn Gχ regions were obtained for both ionic forms. For both forms the anti conformation was more stable than the syn, and barriers of ∼4 kcal/mol were obtained for the anti → syn transition. Str…

chemistry.chemical_classificationRibonucleotideGuanosineStereochemistryProtein ConformationHydrolysisGuanosineGlycosidic bondRibonucleotidesBiochemistryEnzyme structureReaction coordinatechemistry.chemical_compoundDeprotonationRibonucleaseschemistryBacterial ProteinsStructural BiologyAlkane stereochemistryRiboseThermodynamicsGlycosidesMolecular BiologyProteins
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Internal rotation of 1,2-dichloroethane in haloalkane dehalogenase. A test case for analyzing electrostatic effects in enzymes

2003

1,2-Dichoroethane (DCE) is a prototypical molecule for studying electrostatic solvent effects on molecular conformation as far as rotation around the carbon−carbon bond notably changes the electric...

chemistry.chemical_classificationStereochemistryInternal rotation12-DichloroethaneRotationMolecular conformationSurfaces Coatings and Filmschemistry.chemical_compoundEnzymechemistryComputational chemistryMaterials ChemistryMoleculePhysical and Theoretical ChemistrySolvent effectsHaloalkane dehalogenase
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A Simple Organocatalytic Enantioselective Synthesis of Pregabalin

2009

This paper describes a new procedure for the enantioselective synthesis of the important anticonvulsant drug Pregabalin, which shows biological properties as the (S) enantiomer only. The key step of the synthetic sequence is the Michael addition reaction of Meldrum's acid to a nitroalkene mediated by a quinidine derived thiourea. A variety of novel catalysts bearing different groups at the thiourea moiety were synthesized and tested. The most successful catalyst that incorporates a trityl substituent provided up to 75 % ee of (S)-4. The conjugate addition reaction was carried out on a multigram scale with low loadings of catalyst (10 mol-%). Moreover, the catalyst can be recycled showing th…

chemistry.chemical_compoundChemistryDecarboxylationOrganocatalysisOrganic ChemistryMichael reactionEnantioselective synthesisNitroalkaneOrganic chemistryPhysical and Theoretical ChemistryNitroalkeneEnantiomeric excessAsymmetric inductionEuropean Journal of Organic Chemistry
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ChemInform Abstract: Modular One-Pot Synthesis of Tetrasubstituted Pyrroles from α-(Alkylideneamino)nitriles.

2008

2,3,4,5-Tetrasubstituted pyrroles have been prepared with high regioselectivity by a formal cycloaddition of α-(alkylideneamino)nitriles and nitroolefins followed by elimination of HCN and HNO2. The reaction allows the convergent construction of the pyrrole ring in four steps from a nitroalkane and three aldehydes.

chemistry.chemical_compoundchemistryOne-pot synthesisOrganic chemistryRegioselectivityNitroalkaneGeneral MedicineRing (chemistry)Combinatorial chemistryCycloadditionPyrrole derivativesPyrroleChemInform
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Study of lecithin reverse micelles by FT-IR spectroscopy

2007

FT-IR spectra of water/lecithin/deuterated cyclohexane microemulsions as a function of water/lecithin molar ratio R (R=[water]/[lecithin]) at various lecithin volume fractions (φ) have been recorded. After elimination of the spectral contributions due to the deuterated cyclohexane and normalization, the band parameters of the CO and PO4 vibrational modes due to lecithin have been found dependent only upon R. This behaviour has been interpreted in terms of a progressive structural modification of the water/lecithin interface superimposed to the progressive hydration of CO and PO4 groups. Moreover, no correlation between the CO and PO4 band parameters and the formation of gel-like micellar so…

food.ingredientCyclohexaneChemistryAnalytical chemistryInfrared spectroscopyLecithinMicelleCycloalkanechemistry.chemical_compoundfoodDeuteriumMicellar solutionsOrganic chemistryMicroemulsion
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Involvement of an Alkane Hydroxylase System of Gordonia sp. Strain SoCg in Degradation of Solid n-Alkanes▿

2010

ABSTRACT Enzymes involved in oxidation of long-chain n -alkanes are still not well known, especially those in Gram-positive bacteria. This work describes the alkane degradation system of the n -alkane degrader actinobacterium Gordonia sp. strain SoCg, which is able to grow on n -alkanes from dodecane (C 12 ) to hexatriacontane (C 36 ) as the sole C source. SoCg harbors in its chromosome a single alk locus carrying six open reading frames (ORFs), which shows 78 to 79% identity with the alkane hydroxylase (AH)-encoding systems of other alkane-degrading actinobacteria. Quantitative reverse transcription-PCR showed that the genes encoding AlkB (alkane 1-monooxygenase), RubA3 (rubredoxin), RubA4…

food.ingredientMutantMolecular Sequence DataAlkBGene ExpressionStreptomyces coelicolorGordoniaLong-chain n-alkaneGordoniaSettore BIO/19 - Microbiologia Generalemedicine.disease_causeApplied Microbiology and BiotechnologyPolymerase Chain ReactionGas Chromatography-Mass SpectrometryfoodRubredoxinAlkanesSPME/GC-MSmedicineEscherichia coliNADH NADPH OxidoreductasesGordonia BacteriumEscherichia coliBiotransformationSequence DeletionEcologybiologyReverse Transcriptase Polymerase Chain ReactionRubredoxinsStreptomyces coelicolorGordonia BacteriumSequence Analysis DNAbiology.organism_classificationCarbonalkane hydroxylase AlkBBiochemistrybiology.proteinBiodegradationCytochrome P-450 CYP4AFatty AlcoholsBacteriaFood ScienceBiotechnology
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Isolation of Gram-positive n-alkane degraders from a hydrocarbon-contaminated Mediterranean shoreline.

2007

Aims: To investigate the petroleum hydrocarbon (HC)-degrading potential of indigenous micro-organisms in a sandy Mediterranean coast, accidentally contaminated with petroleum-derived HCs. Methods and Results: Using culturable methods, a population of Gram-positive n-alkane degraders was detected in the contaminated soil. Five isolates, identified as one Nocardia, two Rhodococcus and two Gordonia strains, were able to degrade medium- and long-chain n-alkanes up to C36 as assessed by growth assays and gas chromatography-mass spectrometry analysis. Diverging alkane hydroxylase-encoding genes (alkB) were detected by PCR, using degenerated primers, in all the strains; multiple sequences were obt…

food.ingredientPopulationMolecular Sequence DataAlkBColony Count MicrobialGordoniaSettore BIO/19 - Microbiologia GeneraleGram-Positive BacteriaApplied Microbiology and BiotechnologyPolymerase Chain ReactionGas Chromatography-Mass SpectrometryMicrobiologyactinomycetes alkB GC-MS analysis Gordonian-alkane degradation Nocardia Rhodococcus.BioremediationfoodRNA Ribosomal 16SAlkanesSoil PollutantseducationSoil Microbiologyeducation.field_of_studyBacteriological TechniquesbiologyBase SequenceNocardiaGeneral MedicineSettore CHIM/06 - Chimica Organicabiology.organism_classificationNocardiaceaeHydrocarbonsActinobacteriaBiodegradation EnvironmentalItalybiology.proteinActinomycetalesCytochrome P-450 CYP4ARhodococcusBiotechnologyJournal of applied microbiology
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