Search results for "biodegradation"

showing 10 items of 317 documents

Antibiotrophy: Key Function for Antibiotic-Resistant Bacteria to Colonize Soils—Case of Sulfamethazine-Degrading Microbacterium sp. C448

2021

Chronic and repeated exposure of environmental bacterial communities to anthropogenic antibiotics have recently driven some antibiotic-resistant bacteria to acquire catabolic functions, enabling them to use antibiotics as nutritive sources (antibiotrophy). Antibiotrophy might confer a selective advantage facilitating the implantation and dispersion of antibiotrophs in contaminated environments. A microcosm experiment was conducted to test this hypothesis in an agroecosystem context. The sulfonamide-degrading and resistant bacterium Microbacterium sp. C448 was inoculated in four different soil types with and without added sulfamethazine and/or swine manure. After 1 month of incubation, Micro…

Microbiology (medical)media_common.quotation_subject[SDV]Life Sciences [q-bio]lcsh:QR1-502Context (language use)010501 environmental sciencesBiology01 natural sciencesMicrobiologyCompetition (biology)lcsh:Microbiologymicrobial ecotoxicologysoil03 medical and health sciencessulfonamide[CHIM]Chemical SciencesFood scienceIncubation030304 developmental biology0105 earth and related environmental sciencesTrophic levelmedia_commonOriginal Research2. Zero hunger0303 health sciencesSoil classificationbacterial community invasionbiology.organism_classificationManureMicrocosmantibiotic biodegradationBacteria
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The safety, technological, nutritional, and sensory challenges associated with lacto-fermentation of meat and meat products by using pure lactic acid…

2019

Introduction. Lactic acid bacteria (LAB) are the most popular microbial cultures used in the preparation of fermented foods (Bintsis, 2018). Due to their wide range of antimicrobial activity, LAB have been shown to improve safety, nutritional and sensory characteristics, control fermentation by microflora and speed maturation, as well as increase the shelf life of products (Des et al., 2018). Recently, as a new approach for the application of technological starters, great interest has been concentrated on their biodegradation and/or absorption properties of non-desirable chemical compounds, and it was reported that LAB can reduce polycyclic aromatic hydrocarbons (PAHs) and heterocyclic arom…

Microbiology (medical)safetyOpinionlacto-fermentation ; meat and meat products ; plant-lactic acid bacteria bioproducts ; safety ; biogenic amineslcsh:QR1-502biogenic aminesShelf lifeMicrobiologylcsh:Microbiology03 medical and health scienceschemistry.chemical_compoundBioproductsFood scienceNitriteFermentation in food processing030304 developmental biology0303 health sciencesCadaverine030306 microbiologymeat and meat productsfood and beveragesBiodegradationLactic acidchemistryFermentationlacto-fermentationplant-lactic acid bacteria bioproducts
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Degradation of vanillic acid and production of guaiacol by microorganisms isolated from cork samples

2003

The presence of guaiacol in cork stoppers is responsible for some cases of cork taint causing unpleasant alterations to wine. We have performed a characterization of the cork-associated microbiota by isolating 55 different microorganisms: eight yeast, 14 filamentous fungi or molds, 13 actinomycetes and 20 non-filamentous bacteria. A screening for degradation of vanillic acid and guaiacol production showed that none of the filamentous fungi could achieve any of these processes. By contrast, five of the eight yeast strains isolated were able to degrade vanillic acid, although it was not converted to guaiacol. Guaiacol production was only detected in four bacterial strains: one isolate of Baci…

MicroorganismWineCorkengineering.materialMicrobiologyStreptomycesTreesMicrobiologyIndustrial Microbiologychemistry.chemical_compoundYeastsProduct PackagingGeneticsVanillic acidMolecular BiologyVanillic AcidBacteriabiologyGuaiacolFungibiology.organism_classificationStreptomycesYeastActinobacteriaBiodegradation EnvironmentalchemistryGenes BacterialSpainengineeringEquipment ContaminationCork taintGuaiacolBacteriaBacillus subtilisFEMS Microbiology Letters
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Effective Degradation of Cigarette Butts via Treatment with Old Landfill Leachates

2021

In this paper, results of feasibility study on microplastics (MPs) assessment in leachates from the Latvian solid municipal landfill Getliņi are discussed. The application of leachates for the treatment of cigarette butts (CGB) was evaluated. Methods of fluorescent microscopy, Fourier transform infrared (FTIR) spectroscopy and FTIR-microscopy were used for the identification and characterization of MPs in the leachates and analysis of CGB. Presence of the secondary MPs (e.g., degraded polyolefin mixtures) was determined in the tested landfill leachates, while cellulose acetate (CA) was not determined in these products. The leachates were tested as potential media for the thermophilic (55°C)…

Microplastics010504 meteorology & atmospheric sciencesChemistryMechanical Engineering010501 environmental sciencesBiodegradation01 natural sciencesCellulose acetatechemistry.chemical_compoundMechanics of MaterialsEnvironmental chemistryDegradation (geology)General Materials ScienceLeachateFourier transform infrared spectroscopy0105 earth and related environmental sciencesKey Engineering Materials
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Isolation and characterisation of an isoproturon-mineralisingMethylopilasp. TES from French agricultural soil

2004

Using enrichment culture three isoproturon (IPU) mineralising bacterial isolates were isolated from a French agricultural soil mineralising up to 50% of the initially added 14C-ring labelled IPU within only eight days. These isolates showed similar metabolic (BIOLOG GN) and amplified rDNA restriction (ARDRA) profiles. Partial 16S rDNA sequencing revealed that they were identical and identified as Methylopila sp TES. This strain harbours a large plasmid (220 kb) putatively bearing essential IPU-degrading genes as demonstrated by a curing experiment. Methylopila sp. TES transformed IPU and its known metabolites to CO2 and biomass but did not degrade chlorotoluron, monolinuron, diuron and linu…

Molecular Sequence DataBiologyDNA RibosomalMicrobiologyEnrichment cultureMicrobiologychemistry.chemical_compoundPlasmidRNA Ribosomal 16SMethylopila sp. TESBotanyGeneticsMolecular BiologySoil MicrobiologyStrain (chemistry)HerbicidesPhenylurea CompoundsAgricultureSequence Analysis DNAMonolinuronBiodegradation16S ribosomal RNAIsolation (microbiology)Bacterial Typing TechniquesCulture MediaBiodegradation EnvironmentalchemistryFranceMethylocystaceaeFEMS Microbiology Letters
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Isolation and Characterization of Novosphingobium sp. Strain MT1, a Dominant Polychlorophenol-Degrading Strain in a Groundwater Bioremediation System

2002

ABSTRACT A high-rate fluidized-bed bioreactor has been treating polychlorophenol-contaminated groundwater in southern Finland at 5 to 8°C for over 6 years. We examined the microbial diversity of the bioreactor using three 16S ribosomal DNA (rDNA)-based methods: denaturing gradient gel electrophoresis, length heterogeneity-PCR analysis, and restriction fragment length polymorphism analysis. The molecular study revealed that the process was dependent on a stable bacterial community with low species diversity. The dominant organism, Novosphingobium sp. strain MT1, was isolated and characterized. Novosphingobium sp. strain MT1 degraded the main contaminants of the groundwater, 2,4,6-trichloroph…

Molecular Sequence DataFresh WaterDNA RibosomalPolymerase Chain ReactionApplied Microbiology and BiotechnologyMixed Function OxygenasesMicrobiologyBioreactorsBioremediationRNA Ribosomal 16SEnvironmental Microbiology and BiodegradationRibosomal DNAAlphaproteobacteriaSphingobium chlorophenolicumElectrophoresis Agar GelGeneticsEcologyStrain (chemistry)biologyAlphaproteobacteriaGenes rRNASequence Analysis DNA16S ribosomal RNAbiology.organism_classificationBiodegradation EnvironmentalRestriction fragment length polymorphismPolymorphism Restriction Fragment LengthWater Pollutants ChemicalTemperature gradient gel electrophoresisChlorophenolsFood ScienceBiotechnologyApplied and Environmental Microbiology
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Evidence for Natural Horizontal Transfer of the pcpB Gene in the Evolution of Polychlorophenol-Degrading Sphingomonads

2002

ABSTRACT The chlorophenol degradation pathway in Sphingobium chlorophenolicum is initiated by the pcpB gene product, pentachlorophenol-4-monooxygenase. The distribution of the gene was studied in a phylogenetically diverse group of polychlorophenol-degrading bacteria isolated from contaminated groundwater in Kärkölä, Finland. All the sphingomonads isolated were shown to share pcpB gene homologs with 98.9 to 100% sequence identity. The gene product was expressed when the strains were induced by 2,3,4,6-tetrachlorophenol. A comparative analysis of the 16S rDNA and pcpB gene trees suggested that a recent horizontal transfer of the pcpB gene was involved in the evolution of the catabolic pat…

Molecular Sequence Datamedicine.disease_causeSphingomonasApplied Microbiology and BiotechnologyMixed Function OxygenasesGene product03 medical and health sciencesTransduction GeneticRNA Ribosomal 16SmedicineEnvironmental Microbiology and BiodegradationAmino Acid SequenceAlleleGeneEscherichia coli030304 developmental biologySphingobium chlorophenolicumGenetics0303 health sciencesSequence Homology Amino AcidEcologybiology030306 microbiologybiology.organism_classification16S ribosomal RNASphingomonasBiological EvolutionHorizontal gene transferChlorophenolsFood ScienceBiotechnologyApplied and Environmental Microbiology
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Biogas from municipal solid waste landfills: A simplified mathematical model

2018

AbstractMunicipal solid waste (MSW) landfills now represent one of the most important issues related to the waste management cycle. Knowledge of biogas production is a key aspect for the proper exploitation of this energy source, even in the post-closure period. In the present study, a simple mathematical model was proposed for the simulation of biogas production. The model is based on first-order biodegradation kinetics and also takes into account the temperature variation in time and depth as well as landfill settlement. The model was applied to an operating landfill located in Sicily, in Italy, and the first results obtained are promising. Indeed, the results showed a good fit between me…

Municipal solid wasteEnvironmental EngineeringWaste Disposal Facilitie020209 energyBiogas modelling02 engineering and technologySolid WasteBiogasWaste ManagementBiofuelLandfill lifetime0202 electrical engineering electronic engineering information engineeringDuration (project management)Landfill gaSicilyWater Science and TechnologyWaste managementSettore ICAR/03 - Ingegneria Sanitaria-AmbientaleSettlement (structural)Flux chamberModels TheoreticalRefuse DisposalBiodegradation kineticsWaste Disposal FacilitiesLandfill gasBiodegradation EnvironmentalBiofuelBiofuelsEnvironmental scienceEnergy source
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Microbial Degradation of 2,4,6-Trinitrotoluene In Vitro and in Natural Environments

2013

2,4,6-Trinitrotoluene (TNT) is a nitroaromatic explosive that was released into soil and water ecosystems mainly due to its massive use during the two world wars.

Nematoloma frowardiibiologyExplosive materialChemistryEnvironmental chemistryTrinitrotolueneStropharia rugosoannulataEcosystemMicrobial biodegradationbiology.organism_classificationNatural (archaeology)
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Complete sequencing of Novosphingobium sp. PP1Y reveals a biotechnologically meaningful metabolic pattern.

2014

Background Novosphingobium sp. strain PP1Y is a marine α-proteobacterium adapted to grow at the water/fuel oil interface. It exploits the aromatic fraction of fuel oils as a carbon and energy source. PP1Y is able to grow on a wide range of mono-, poly- and heterocyclic aromatic hydrocarbons. Here, we report the complete functional annotation of the whole Novosphingobium genome. Results PP1Y genome analysis and its comparison with other Sphingomonadal genomes has yielded novel insights into the molecular basis of PP1Y’s phenotypic traits, such as its peculiar ability to encapsulate and degrade the aromatic fraction of fuel oils. In particular, we have identified and dissected several highly …

NovosphingobiumSphingomonadDe novo sequencing; Novosphingobium sp. PP1Y; Sphingomonads; Aromatic pollutant compounds/bioremediationAromatic pollutant compoundComputational biologyNovosphingobium sp. PP1YAromatic pollutant compounds/bioremediationGenomeSphingomonadsDNA sequencingDe novo sequencingbioremediationNext generation sequencingGeneticsPhylogenyWhole genome sequencingGeneticschemistry.chemical_classificationbiologyHigh-Throughput Nucleotide SequencingQuorum SensingSequence Analysis DNAbiology.organism_classificationSphingomonadaceaeSphingomonadaceaeQuorum sensingBiodegradation EnvironmentalchemistryGenes BacterialEnergy sourceAromatic hydrocarbonMetabolic Networks and PathwaysResearch ArticleBiotechnology
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