Search results for "bonding"

showing 10 items of 996 documents

N-(6-Methylpyridin-2-yl)mesitylenesulfonamide and acetic acid--a salt, a cocrystal or both?

2015

In the solid obtained fromN-(6-methylpyridin-2-yl)mesitylenesulfonamide and acetic acid, the constituents interactviatwo N—H...O hydrogen bonds. The H atom situated in one of these short contacts is disordered over two positions: one of these positions is formally associated with an adduct of the neutral sulfonamide molecule and the neutral acetic acid molecule, and corresponds to a cocrystal, while the alternative site is associated with salt formation between a protonated sulfonamide molecule and deprotonated acetic acid molecule. Site-occupancy refinements and electron densities from difference Fourier maps suggest a trend with temperature, albeit of limited significance; the cocrystal i…

crystal structureStereochemistryPyridinesProtonationCrystallography X-RayCocrystalMedicinal chemistrysalt-cocrystal continuumAdductInorganic ChemistryAcetic acidchemistry.chemical_compoundDeprotonationpharmaceutically active ingredientsMaterials ChemistryMoleculesaltPhysical and Theoretical Chemistrycocrystalta116Acetic Acidchemistry.chemical_classificationSulfonamidesmesitylenesulfonamideMolecular StructureHydrogen bondHydrogen BondingCondensed Matter PhysicsSulfonamidebenzenesulfonamidechemistryIR spectroscopySaltsActa crystallographica. Section C, Structural chemistry
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Selective formation of a unique diphosphonium-diphosphine from a tetraphosphine double protonation induced by zirconium salts

2008

A mixed ferrocenyl diphosphonium-diphosphine cation, associated with two [ZrCl(5).thf](-) anions, is obtained from a ferrocenyl tetraphosphine, as a unique didentate ionic metalloligand in a perfectly selective reaction induced by ZrCl(4) in THF.

crystal structureZirconiumSelective reaction010405 organic chemistryChemistryprotonationInorganic chemistry[ CHIM.COOR ] Chemical Sciences/Coordination chemistryzirconiumIonic bondingchemistry.chemical_elementProtonationphosphonium010402 general chemistry01 natural sciencesferrocenyl0104 chemical sciences3. Good healthInorganic ChemistryPolymer chemistrypolyphosphine[CHIM.COOR]Chemical Sciences/Coordination chemistryComputingMilieux_MISCELLANEOUSDalton Transactions
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Crystal structure of 2-hy­droxy­imino-2-(pyridin-2-yl)-N'-[1-(pyridin-2-yl)ethyl­idene]acetohydrazide

2014

The mol­ecule of the title compound is approximately planar with the planes of the two pyridine rings inclined to one another by 5.51 (7)°. In the crystal, mol­ecules are linked by bifurcated O—H⋯(O,N) hydrogen bonds, forming inversion dimers, which are in turn linked via C—H⋯O and C—H⋯N hydrogen bonds, forming sheets lying parallel to (502).

crystal structureacetohydrazidehy­droxy­iminoStackingpyridylethylideneCrystal structureRing (chemistry)Research CommunicationsCrystalchemistry.chemical_compoundAmideπ–π stacking interactionsPyridineGeneral Materials Scienceta116CrystallographyChemistryHydrogen bondGeneral ChemistryCondensed Matter PhysicsOximehydrogen bondingCrystallographyQD901-999π–π stacking inter­actionshydroxyiminopyridyl­ethyl­ideneActa Crystallographica Section E : Structure Reports Online
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Crystal structure of di-μ-isobutyrato-κ(4) O:O'-bis-[cis-di-chlorido-(dimethyl sulfoxide-κS)rhenium(III)].

2015

A binuclear bis­(carboxyl­ato)dirhenium(III) complex is reported. The compound is a representative of a small class of alkyl­carboxyl­ate complexes involving a quadruple metal–metal bonds

crystal structurechemistry.chemical_elementNanotechnologyCrystal structureChlorideIonResearch CommunicationsCrystalchemistry.chemical_compoundquadruple metal–metal bondalkylcarboxylate complexmedicineCluster (physics)General Materials ScienceclusterCrystallographyDimethyl sulfoxideHydrogen bondGeneral ChemistryRheniumCondensed Matter Physicshydrogen bondingrhenium(III)CrystallographychemistryQD901-999alkyl­carboxyl­ate complexmedicine.drugActa crystallographica. Section E, Crystallographic communications
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Tris(1,10-phenanthroline-κ2N,N′)nickel(II) bis(hexafluoridophosphate)

2018

The asymmetric unit of the title compound, [Ni(C36H24N6)3](PF6)2, contains one and a half nickel(II) complex dications and three hexafluoridophosphate anions, one of the dications having crystallographic twofold rotational symmetry. Each NiIIatom displays a distorted octahedral coordination geometry provided by the six N atoms of three bidentate 1,10-phenanthroline ligands with bite angles of 79.68 (11)–80.76 (12)°. In the crystal, C—H...F hydrogen bonds link the anions and dications into a three-dimensional supramolecular framework. Within the framework complex dications with twofold rotational symmetry are linked by weak π–π stacking interactions [centroid-to-centroid distances = 3.712 (2…

crystal structurehexafluoridophosphateDenticity110-phenanthrolineChemistryHydrogen bondPhenanthrolineStackingchemistry.chemical_elementGeneral MedicineCrystal structure010402 general chemistry010403 inorganic & nuclear chemistryHEXAhydrogen bonding01 natural sciences0104 chemical scienceschemistry.chemical_compoundNickelCrystallographylcsh:QD901-999lcsh:Crystallographynickel(II)Coordination geometryIUCrData
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Intramolecular 1,5-S...N σ-hole interaction in (E)-N′-(pyridin-4-ylmethylidene)thiophene-2-carbohydrazide

2020

The hydrazide-hydrazone forms inverse dimers via hydrogen bonding, but its conformation is defined by the presence of an intra­molecular chalcogen bond. Electrostatic forces dominate in the crystal packing and give rise to a layered supra­molecular structure.

crystal structurehirshfeld surfaceDouble bondImineStackingCrystal structureCarbohydrazide010402 general chemistryRing (chemistry)01 natural sciencesResearch Communicationsenergy frameworkslcsh:Chemistrychemistry.chemical_compoundchalcogen bondingGeneral Materials Sciencechemistry.chemical_classificationQuantitative Biology::Biomoleculesintermolecular interaction energies010405 organic chemistryHydrogen bondGeneral Chemistryinter­molecular inter­action energieshydrogen bondingCondensed Matter Physics4-pyridinecarboxaldehyde 2-thienyl hydrazone0104 chemical sciencesCrystallographylcsh:QD1-999chemistry4-pyridine­carboxaldehyde 2-thienyl hydrazoneMonoclinic crystal systemActa Crystallographica Section E Crystallographic Communications
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Crystal structure of (E)-2-(tert-butyl­amino)-4-(tert-butyl­imino)­naphthalen-1(4H)-one

2018

The title compound is the first example of a naphtho­quinone imine derivative crystallizing in the 4-imine/2-amine tautomeric form having bulky tert-butyl substituents at the N atoms.

crystal structureintra­molecular hydrogen bondingIminenaphthoquinoneCrystal structure010402 general chemistry01 natural sciencesMedicinal chemistryResearch Communicationslcsh:Chemistrychemistry.chemical_compoundsymbols.namesakeGeneral Materials ScienceIntra­molecular hydrogen bondingAlkylchemistry.chemical_classificationintramolecular hydrogen bonding010405 organic chemistryHydrogen bondCrystal structurenaphtho­quinoneGeneral ChemistryCondensed Matter PhysicsTautomer0104 chemical scienceslcsh:QD1-999chemistryNaphtho­quinonesymbols540 QuímicaAmine gas treatingN—H...O hydrogen bondingvan der Waals forceDerivative (chemistry)N—H⋯O hydrogen bondingActa Crystallographica Section E: Crystallographic Communications
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Substituent effects in nitro derivatives of carbazoles investigated by comparison of low-temperature crystallographic studies with density functional…

2014

The crystal structure of 9H-carbazole, C12H9N, (I), has been redetermined at low temperature for use as a reference structure in a comparative study with the structures of 1-nitro-9H-carbazole, C12H8N2O2, (II), and 9-nitrocarbazole, C12H8N2O2, (III). The molecule of (I) has crystallographically imposed mirror symmetry (Z′ = 0.5). All three solid-state structures are slightly nonplanar, the dihedral angles between the planes of the arene and pyrrole rings ranging from 0.40 (7)° in (III) to 1.82 (18)° in (II). Nevertheless, a density functional theory (DFT) study predicts completely planar conformations for the isolated molecules. To estimate the influence of nitro-group substitution on aroma…

crystal structuremolecular electronicsSubstituentStackingElectronsbiological activityCrystal structureDihedral angleCrystallography X-RayDFT calculationsInorganic Chemistrychemistry.chemical_compoundDelocalized electronHOMA indexMaterials ChemistryPhysical and Theoretical ChemistryMolecular StructureHydrogen bondTemperatureHydrogen BondingAromaticityNitro CompoundsCondensed Matter PhysicsCrystallographycarbazoleselectron-withdrawing effectschemistryQuantum TheoryDensity functional theoryActa Crystallographica Section C-Structural Chemistry
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Crystal structure of bis-(allyl-ammonium) oxalate.

2014

The title salt, 2C3H8N+·C2O42−, crystallized with six independent allylammonium cations and three independent oxalate dianions in the asymmetric unit. One of the oxalate dianions is nearly planar [dihedral angle between CO2planes = 1.91 (19)°], while the other two are twisted with angles of 11.3 (3) and 26.09 (13)°. One cation has a synperiplanar (cis) conformation with an N—C—C—C torsion angle of 0.9 (3)°, whereas the five remaining cations are characterized bygauchearrangements, with the N—C—C—C torsion angles ranging from 115.9 (12) to 128.8 (3)°. One of the allylammonium cations is positionally disordered (fixed occupancy ratio = 0.45:0.55). In the crystal, the cations and anions are co…

crystal structureoxalateallylammoniumHydrogen bondGeneral ChemistryCrystal structureAmmonium oxalateDihedral angleCondensed Matter PhysicsBioinformaticshydrogen bondingOxalateData ReportsDicationlcsh:Chemistrychemistry.chemical_compoundCrystallographydicationchemistrylcsh:QD1-999allyl­ammoniumGeneral Materials ScienceActa crystallographica. Section E, Structure reports online
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B‐DNA structure and stability: the role of nucleotide composition and order

2022

Abstract We have quantum chemically analyzed the influence of nucleotide composition and sequence (that is, order) on the stability of double‐stranded B‐DNA triplets in aqueous solution. To this end, we have investigated the structure and bonding of all 32 possible DNA duplexes with Watson–Crick base pairing, using dispersion‐corrected DFT at the BLYP‐D3(BJ)/TZ2P level and COSMO for simulating aqueous solvation. We find enhanced stabilities for duplexes possessing a higher GC base pair content. Our activation strain analyses unexpectedly identify the loss of stacking interactions within individual strands as a destabilizing factor in the duplex formation, in addition to the better‐known eff…

diagonal interactionsnucleotide compositionNucleotidesHydrogen BondingGeneral ChemistryDNAactivation strain modelDNA structuresSettore CHIM/03 - Chimica Generale E Inorganicadensity functional calculationsNucleic Acid ConformationThermodynamicsHumansTheoretical ChemistryDNA B-FormResearch ArticlesResearch Article
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