Search results for "malate"

showing 10 items of 67 documents

Cloning and characterization of the genes encoding the malolactic enzyme and the malate permease of Leuconostoc oenos

1996

Using degenerated primers from conserved regions of the protein sequences of malic enzymes, we amplified a 324-bp DNA fragment by PCR from Leuconostoc oenos and used this fragment as a probe for screening a Leuconostoc oenos genomic bank. Of the 2,990 clones in the genomic bank examined, 7 with overlapping fragments were isolated by performing colony hybridization experiments. Sequencing 3,453 bp from overlapping fragments revealed two open reading frames that were 1,623 and 942 nucleotides long and were followed by a putative terminator structure. The first deduced protein (molecular weight, 59,118) is very similar (level of similarity, 66%) to the malolactic enzyme of Lactococcus lactis; …

DNA BacterialMalolactic enzymeLeuconostoc oenosMolecular Sequence DataRestriction MappingMalatesBiological Transport ActiveOrganic Anion TransportersSaccharomyces cerevisiaeBiologyPolymerase Chain ReactionApplied Microbiology and BiotechnologyMalate dehydrogenaseOpen Reading FramesBacterial ProteinsMalate DehydrogenaseGene cluster[SDV.BBM] Life Sciences [q-bio]/Biochemistry Molecular BiologyEscherichia coliLeuconostocAmino Acid SequenceCloning MolecularMalate transportDNA PrimersGenomic organizationBase SequenceSequence Homology Amino AcidEcologyLactococcus lactisNucleic acid sequenceMembrane Transport Proteinsbiology.organism_classificationMolecular biologymalate permeaseMolecular WeightOpen reading frameBiochemistryGenes BacterialLeuconostocResearch ArticleFood ScienceBiotechnologyApplied and Environmental Microbiology
researchProduct

Functional and genomic diversity of methylotrophic Rhodocyclaceae: description of Methyloversatilis discipulorum sp. nov.

2015

Three strains of methylotrophic Rhodocyclaceae (FAM1T, RZ18-153 and RZ94) isolated from Lake Washington sediment samples were characterized. Based on phylogenetic analysis of 16S rRNA gene sequences the strains should be assigned to the genus Methyloversatilis. Similarly to other members of the family, the strains show broad metabolic capabilities and are able to utilize a number of organic acids, alcohols and aromatic compounds in addition to methanol and methylamine. The main fatty acids were 16:1ω7c (49–59 %) and 16:0 (32–29 %). Genomes of all isolates were sequenced, assembled and annotated in collaboration with the DOE Joint Genome Institute (JGI). Genome comparison revealed that the s…

DNA BacterialWashingtonGeologic SedimentsRhodocyclaceaeSequence analysisMolecular Sequence Datalake sedimentsRhodocyclaceaeMicrobiologyPhylogeneticsRNA Ribosomal 16SMalate synthasePhylogenyEcology Evolution Behavior and SystematicsGeneticsbiologyMethanol dehydrogenaseta1184phylogenetic analysista1183Fatty AcidsGenomicsSequence Analysis DNAGeneral MedicineIsocitrate lyaseRibosomal RNA16S ribosomal RNAbiology.organism_classificationBacterial Typing TechniquesAlcohol OxidoreductasesLakesBiochemistrybiology.proteinmetabolismGenome BacterialInternational Journal of Systematic and Evolutionary Microbiology
researchProduct

The effect of water on protein dynamics

2004

Neutron diffraction and spectroscopy were applied to describe the hydration and dynamics of a soluble protein and a natural membrane from extreme halophilic Archaea. The quantitative dependence of protein motions on water activity was clearly illustrated, and it was established that a minimum hydration shell is required for the systems to access their functional resilience, i.e. a dynamics state that allows biological activity.

Dynamical transitionWater activityNeutron diffractionHalophilic malate dehydrogenaseBacteriorhodopsinHydration shellNeutronEuryarchaeotaGeneral Biochemistry Genetics and Molecular BiologyMalate DehydrogenaseSpectroscopySpectrum AnalysibiologyChemistrySpectrum AnalysisProtein dynamicsWaterBacteriorhodopsinPurple membraneAgricultural and Biological Sciences (miscellaneous)Settore FIS/07 - Fisica Applicata(Beni Culturali Ambientali Biol.e Medicin)Neutron DiffractionMembraneSolvation shellAgricultural and Biological Sciences (all)BiochemistryChemical physicsBacteriorhodopsinsbiology.proteinBacteriorhodopsinsGeneral Agricultural and Biological SciencesResearch ArticlePhilosophical Transactions of the Royal Society of London. Series B: Biological Sciences
researchProduct

Seasonal pattern of mannitol and malate accumulation in leaves of two manna ash species (Fraxinus ornus L. and F. angustifolia Vahl) growing in Sicily

2002

The content of mannitol and malate was assayed enzimatically during spring, summer and autumn, in leaves of two species of ash traditionally cultivated in Sicily for the extraction of manna. The results suggest that in these species, under the local field conditions, mannitol has a more relevant role than malate in the response to summer drought.

Fraxinus malate manna ash mannitol seasonal variationSettore BIO/04 - Fisiologia Vegetale
researchProduct

Assessing the genetic diversity ofCentaurea parlatorisgroup (sect.Dissectae, Compositae) in Sicily using isozymes

2011

Abstract The Centaurea parlatoris group belongs to sect. Dissectae and is one of the most taxonomically critical groups in Sicily. The taxa included in it inhabit dry slopes, pastures and rocky places. Some of them are narrow endemics to Sicily, and others to Italy. The great morphological variability at the intrapopulation level has not permitted the creation of an adequate taxonomic scheme. The recent proposal of two new species from Sicily confirms the insufficient knowledge of the taxonomic diversity. This study involves eight Sicilian populations of the C. parlatoris group. Seven loci from nine enzyme systems [isocitrate dehydrogenase (IDH), malate dehydrogenase (MDH), 6-phosphoglucona…

Genetic diversitybiologyPlant Sciencebiology.organism_classificationMalate dehydrogenaselanguage.human_languageIsocitrate dehydrogenaseTaxonCentaureaCentaurea endemics genetic diversity isozyme SicilyBotanylanguagePhosphoglucomutaseEndemismSicilianEcology Evolution Behavior and SystematicsPlant Biosystems - An International Journal Dealing with all Aspects of Plant Biology
researchProduct

Metabolism of the anaerobic formation of succinic acid bySaccharomyces cerevisiae

1978

1. Succinic acid is formed in amounts of 0.2–1.7 g/l by fermenting yeasts of the genusSaccharomyces during the exponential growth phase. No differences were observed between the various species, respiratory deficient mutants and wild type strains. 2. At low glucose concentrations the formation of succinic acid depended on the amount of sugar fermented. However, the nitrogen source was found to be of greater importance than the carbon source. 3. Of all nitrogen sources, glutamate yielded the highest amounts of succinic acid. Glutamate led to an oxidative and aspartate to a reductive formation of succinic acid. 4. A reductive formation of succinic acid by the citric acid cycle enzymes was obs…

Glutamate dehydrogenaseGlyoxylate cycleDehydrogenaseGeneral MedicineMetabolismBiologyNicotinamide adenine dinucleotideBiochemistryMicrobiologyMalate dehydrogenaseCitric acid cyclechemistry.chemical_compoundchemistryBiochemistrySuccinic acidGeneticsMolecular BiologyArchives of Microbiology
researchProduct

DcuA of aerobically grownEscherichia coliserves as a nitrogen shuttle (L‐aspartate/fumarate) for nitrogen uptake

2018

DcuA of Escherichia coli is known as an alternative C4 -dicarboxylate transporter for the main anaerobic C4 -dicarboxylate transporter DcuB. Since dcuA is expressed constitutively under aerobic and anaerobic conditions, DcuA was suggested to serve aerobically as a backup for the aerobic (DctA) transporter, or for the anabolic uptake of C4 -dicarboxylates. In this work, it is shown that DcuA is required for aerobic growth with L-aspartate as a nitrogen source, whereas for growth with L-aspartate as a carbon source, DctA was needed. Strains with DcuA catalyzed L-aspartate and C4 -dicarboxylate uptake (like DctA), or an L-aspartate/C4 -dicarboxylate antiport (unlike DctA). DcuA preferred L-asp…

Glycerol0301 basic medicineendocrine system diseasesAntiporter030106 microbiologyMalateschemistry.chemical_elementBiologymedicine.disease_causeMicrobiology03 medical and health scienceschemistry.chemical_compoundBacterial ProteinsFumaratesAspartic acidEscherichia colimedicineGlycerolMolecular BiologyEscherichia coliDicarboxylic Acid TransportersAspartic AcidEscherichia coli Proteinsnutritional and metabolic diseasesBiological TransportTransporterbiology.organism_classificationNitrogen030104 developmental biologychemistryBiochemistryAnaerobic exercisehormones hormone substitutes and hormone antagonistsBacteriaMolecular Microbiology
researchProduct

How hexoses and inhibitors influence the malate transport system in Zygosaccharomyces bailii

1988

When grown in fructose or glucose the cells of Zygosaccharomyces bailii were physiologically different. Only the glucose grown cells (glucose cells) possessed an additional transport system for glucose and malate. Experiments with transport mutants had lead to the assumption that malate and glucose were transported by one carrier, but further experiments proved the existence of two separate carrier systems. Glucose was taken up by carriers with high and low affinity. Malate was only transported by an uptake system and it was not liberated by starved malate-loaded cells, probably due to the low affinity of the intracellular anion to the carrier. The uptake of malate was inhibited by fructose…

HexokinasebiologyZygosaccharomyces bailiiGlucose transporterFructoseGeneral MedicineMaltosebiology.organism_classificationBiochemistryMicrobiologyMalate dehydrogenasechemistry.chemical_compoundchemistryBiochemistryGeneticsMalate transportMolecular BiologyHexose transportArchives of Microbiology
researchProduct

Anti-tumor activity of two binuclear gold(I) complexes with bridging dithiolate ligands

1986

Abstract Two new binuclear complexes of gold with bridging dithiolate ligands were synthesized and characterized: (o3PAu)2(μ-DTE) and (Et3PAu)2(μ-DMTA); H2DTE=dithioerylthritol and H2DMTA=2,5-dimer- capto-1-thia-3,4-diazole. These compounds and three gold compounds with antiarthritic activity (gold sodium thiomalate, gold thioglucose and Et3PAuCl) were tested for antitumor activity using the Ehrlich- Ascites tumor cell in mice. Only (o3PAu)e(μ-DTE) showed significant activity.

Inorganic ChemistryAntitumor activitychemistry.chemical_compoundGold CompoundschemistryStereochemistryMaterials ChemistryTumor cellsBiological activityPhysical and Theoretical ChemistryTriphenylphosphineGold Sodium ThiomalateGold thioglucoseInorganica Chimica Acta
researchProduct

Malic Enzyme and Malolactic Enzyme Pathways Are Functionally Linked but Independently Regulated in Lactobacillus casei BL23

2013

ABSTRACT Lactobacillus casei is the only lactic acid bacterium in which two pathways for l -malate degradation have been described: the malolactic enzyme (MLE) and the malic enzyme (ME) pathways. Whereas the ME pathway enables L. casei to grow on l -malate, MLE does not support growth. The mle gene cluster consists of three genes encoding MLE ( mleS ), the putative l -malate transporter MleT, and the putative regulator MleR. The mae gene cluster consists of four genes encoding ME ( maeE ), the putative transporter MaeP, and the two-component system MaeKR. Since both pathways compete for the same substrate, we sought to determine whether they are coordinately regulated and their role in l -m…

Lactobacillus caseiPhysiologyMalatesMalic enzymeBiologyApplied Microbiology and BiotechnologyMalate dehydrogenaseGene Knockout TechniquesMalate DehydrogenaseGene clusterLactic AcidGeneRegulation of gene expressionEcologyActivator (genetics)Gene Expression ProfilingfungiBiological TransportTransporterGene Expression Regulation Bacterialrespiratory systembiology.organism_classificationCarbonLacticaseibacillus caseiBiochemistryMultigene FamilyEnergy MetabolismMetabolic Networks and PathwaysFood ScienceBiotechnologyApplied and Environmental Microbiology
researchProduct