Search results for "molecular conformation"

showing 10 items of 376 documents

Influence of the anions on the structure and magnetic properties of a series of bis(µ-diphexono)-bridged linear trinuclear copper(II) complexes: an e…

2011

The reaction of H(2)L (N,N'-dimethyl-N,N'-bis(2-hydroxy-3-methoxy-5-methylbenzyl)-ethylenediamine) with different copper salts, in methanol and using a H(2)L/Cu = 2 : 3 molar ratio, led to four new bis(μ-diphenoxo)-bridged Cu(3) complexes of general formula [{Cu(S)(μ-L)}(2)Cu(H(2)O)(2n)]X(2) (S = CH(3)OH, n = 1 and X = BF(4)(-) for (1) or ClO(4)(-) for (2); S = Br(3)(-) anion and n = 1 without any X species for (3); S = H(2)O, n = 0 and X = NO(3)(-) for (4)). The use in the same reaction conditions of 4,4'-bipyridine (4,4'-bipy) as connector led to the chain complex [{Cu(μ-4,4'-bipy)(0.5)(μ-L)}(2)Cu(H(2)O)(2n)](ClO(4))(2)·17H(2)O (5). The structure of the centrosymmetric trinuclear unit in …

AnionsSteric effectsChemistryInorganic chemistryMolecular Conformationchemistry.chemical_elementEthylenediamineModels TheoreticalCrystallography X-RayCopperMagnetic susceptibilityInorganic ChemistryMetalMagneticsCrystallographychemistry.chemical_compoundCoordination Complexesvisual_artOctahedral molecular geometryAtomvisual_art.visual_art_mediumAntiferromagnetismta116CopperDalton Transactions
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Anion Recognition by a Bioactive Diureidodecalin Anionophore: Solid-State, Solution, and Computational Studies

2018

Recent work has identified a bis-(p-nitrophenyl)ureidodecalin anion carrier as a promising candidate for biomedical applications, showing good activity for chloride transport in cells yet almost no cytotoxicity. To underpin further development of this and related compounds, a detailed structural and binding investigation is reported. Crystal structures of the transporter as five solvates confirm the diaxial positioning of urea groups while revealing a degree of conformational flexibility. Structures of complexes with Cl−, Br−, NO3 −, SO4 2− and AcO−, supported by computational studies, show how the binding site can adapt to accommodate these anions. 1H NMR binding studies revealed exception…

Anionsinorganic chemicalsMagnetic Resonance SpectroscopyAnion ReceptorsMolecular Conformationreceptorsanion recognitionCrystal structureCrystallography X-Ray010402 general chemistry01 natural sciencesChlorideCatalysisNitrophenolsComputers MolecularPhysico-chimie généraleChloridesChimie des colloïdesTheoryofComputation_ANALYSISOFALGORITHMSANDPROBLEMCOMPLEXITYmedicineUreaChimieMoleculehost–guest interactionsBinding siteta116Binding SitesFull Paper010405 organic chemistryChemistryHydrogen bondOrganic ChemistryChimie des surfaces et des interfacesGeneral ChemistryFull PapersAffinities0104 chemical sciences3. Good healthChimie organiqueCrystallographyhydrogen bondssolid-state structuresProton NMRSelectivityanionsmedicine.drugChemistry - A European Journal
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General Diastereoselective Synthetic Approach toward Isospongian Diterpenes. Synthesis of (−)-Marginatafuran, (−)-Marginatone, and (−)-20-Acetoxymarg…

2012

This work describes a synthetic approach to the carbocyclic skeleton of isospongian diterpenes that uses the commercially available monoterpene (S)-carvone as a C-ring synthon, which is incorporated into the tetracyclic isospongian framework via a C -> ABC -> ABCD ring annulation strategy using intramolecular Diels-Alder and ring-closing metathesis reactions. This approach has been successfully used to prepare both the title natural isospongians and several nonnatural oxygenated analogues. A preliminary evaluation of the inhibitory activity of the small collection of synthesized isospongians on the mammalian mitochondrial respiratory chain revealed that most were able to inhibit the integra…

AnnulationChemistryStereochemistryMonoterpeneOrganic ChemistrySynthonMolecular ConformationStereoisomerismStereoisomerismRing (chemistry)Mitochondrial respiratory chainIntramolecular forceSalt metathesis reactionDiterpenesThe Journal of Organic Chemistry
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Sequestering aromatic molecules with a spin-crossover Fe(II) microporous coordination polymer.

2012

All in a spin: A series of three-dimensional porous coordination polymer {Fe(dpe)[Pt(CN)(4)]}⋅G (dpe = 1,2-di(4-pyridyl)ethylene; G = phenazine, anthracene, or naphthalene) exhibiting spin crossover and host-guest functions is reported. The magnetic properties of the framework are very sensitive to the chemical nature (aromatic or hydroxilic solvents) and the size of the included guest molecules.

AnthraceneEthyleneMolecular StructureCoordination polymerPolymersOrganic ChemistryPhenazineInorganic chemistryMolecular ConformationGeneral ChemistryMicroporous materialCrystallography X-RayCatalysischemistry.chemical_compoundMagneticschemistrySpin crossoverPolymer chemistryMoleculeFerrous CompoundsNaphthaleneChemistry (Weinheim an der Bergstrasse, Germany)
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Synthesis and biological evaluation of abietic acid derivatives

2009

A series of C18-oxygenated derivatives of abietic acid were synthesized and evaluated for their cytotoxic, antimycotic, and antiviral activities. In general, the introduction of an aldehyde group at C18 did improve the resultant bioactivity, while the presence of an acid or alcohol led to less active compounds.

Antifungal AgentsCarboxylic acidMolecular ConformationAntineoplastic AgentsAlcoholHerpesvirus 1 HumanMicrobial Sensitivity TestsPrimary alcoholAntiviral AgentsChemical synthesisAldehydeStructure-Activity Relationshipchemistry.chemical_compoundChlorocebus aethiopsDrug DiscoveryAnimalsHumansStructure–activity relationshipOrganic chemistryAbietic acidVero CellsCandidaCell ProliferationPharmacologychemistry.chemical_classificationDose-Response Relationship DrugAspergillus fumigatusOrganic Chemistryfood and beveragesStereoisomerismGeneral Medicineequipment and suppliesAspergilluschemistryDrug DesignAbietaneslipids (amino acids peptides and proteins)DiterpeneHeLa CellsEuropean Journal of Medicinal Chemistry
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Synthesis and evaluation of diverse thio avarol derivatives as potential UVB photoprotective candidates.

2007

Semisynthesis of 13 new thio avarol derivatives (4-16) and in vitro evaluation on the photodamage response induced by UVB irradiation are described. Their ability to inhibit NF-kappaB activation and TNF-alpha generation in HaCaT cells as well as their antioxidant capacity in human neutrophils has also been studied. Among them we have identified two monophenyl thio avarol derivatives (4-5) lacking cytotoxicity which can be considered promising UVB photoprotective agents through the potent inhibition of NF-kappaB activation with a mild antioxidant pharmacological profile.

AntioxidantMagnetic Resonance SpectroscopyNeutrophilsPhotochemistryUltraviolet Raysmedicine.medical_treatmentChemistry PharmaceuticalClinical BiochemistryMolecular ConformationPharmaceutical ScienceThio-BiochemistryChemical synthesisAntioxidantsCell Line TumorDrug DiscoverymedicineHumansCytotoxicityMolecular Biologyintegumentary systemChemistryTumor Necrosis Factor-alphaOrganic ChemistryNF-kappa BSemisynthesisIn vitroHaCaTmedicine.anatomical_structureBiochemistryModels ChemicalDrug DesignMolecular MedicineKeratinocyteReactive Oxygen SpeciesSesquiterpenesBioorganicmedicinal chemistry letters
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Synthesis of new, UV-photoactive dansyl derivatives for flow cytometric studies on bile acid uptake.

2009

Four new fluorescent derivatives of cholic acid have been synthesized; they incorporate a dansyl moiety at 3 alpha-, 3 beta-, 7 alpha- or 7 beta- positions. These cholic acid analogs are UV photoactive and also exhibit green fluorescence. In addition, they have been demonstrated to be suitable for studying the kinetics of bile acid transport by flow cytometry.

Bile acid transportmedicine.drug_classPhotochemistryUltraviolet RaysKineticsMolecular ConformationBiochemistryFluorescenceFlow cytometrychemistry.chemical_compoundfluids and secretionsmedicinepolycyclic compoundsMoietyAnimalsPhysical and Theoretical ChemistryDansyl CompoundsChromatographyBile acidmedicine.diagnostic_testOrganic ChemistryCholic acidCholic AcidsStereoisomerismFlow CytometryFluorescenceRatsKineticschemistryLiverOrganicbiomolecular chemistry
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Zinc Binding Sites Conserved in Short Neuropeptides Containing a Diphenylalanine Motif

2019

A diphenylalanine motif in peptides plays a crucial role in supramolecular systems. The current work represents a novel strategy in which a diphenylalanine motif in the central domain of neuropeptides conserves the specific Zn2+ binding site and prevents "hopping" of the Zn2+ ion between alternative metal binding sites. Alternative metal binding sites may also include carboxylic atoms in the terminal domains of a peptide. Therefore, one needs to design a peptide in which the metal will not bind the carboxylic groups in the terminal domains. Herein, we propose that engineering and designing peptides with a diphenylalanine motif in the central domain may yield excellent metal chelators.

Binding SitesZinc binding010405 organic chemistryStereochemistryPhenylalanineNeuropeptidesMolecular Conformationtechnology industry and agricultureSupramolecular chemistryNeuropeptideDipeptidesmacromolecular substancesMolecular Dynamics Simulation010402 general chemistry01 natural sciences0104 chemical sciencesInorganic ChemistryZincchemistry.chemical_compoundMotif (narrative)chemistryPhysical and Theoretical ChemistryDiphenylalanineInorganic Chemistry
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Manganese(II) complexes of scorpiand-like azamacrocycles as MnSOD mimics.

2011

Mn(II) complexes of scorpiand-type azamacrocycles constituted by a tretrazapyridinophane core appended with an ethylamino tail including 2- or 4-quinoline functionalities show very appealing in vitro SOD activity. The observed behaviour is related to structural and electrochemical parameters.

Biomimetic materialsAza CompoundsManganeseMacrocyclic CompoundsStereochemistrySuperoxide DismutaseMetals and AlloysMolecular Conformationchemistry.chemical_elementGeneral ChemistryManganeseElectrochemistryCrystallography X-RayCatalysisMolecular conformationSurfaces Coatings and FilmsElectronic Optical and Magnetic MaterialschemistryBiomimetic MaterialsCoordination ComplexesMaterials ChemistryCeramics and CompositesQuinolinesAza CompoundsChemical communications (Cambridge, England)
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Conformation-specific blockade of the integrin GPIIb/IIIa: a novel antiplatelet strategy that selectively targets activated platelets.

2006

Platelet activation causes conformational changes of integrin GPIIb/IIIa (α IIb β 3 ), resulting in the exposure of its ligand-binding pocket. This provides the unique possibility to design agents that specifically block activated platelets only. We used phage display of single-chain antibody (scFv) libraries in combination with several rounds of depletion/selection to obtain human scFvs that bind specifically to the activated conformation of GPIIb/IIIa. Functional evaluation of these scFv clones revealed that fibrinogen binding to human platelets and platelet aggregation can be effectively inhibited by activation-specific scFvs. In contrast to clinically used GPIIb/IIIa blockers, which ar…

Blood PlateletsCarotid Artery DiseasesBleeding TimePhysiologyAmino Acid MotifsMolecular ConformationEptifibatidePlatelet Glycoprotein GPIIb-IIIa ComplexFerric CompoundsAntibodiesMiceChloridesFibrinolytic AgentsmedicineAbciximabAnimalsHumansPlateletPlatelet activationChemistryFibrinogen bindingFibrinogenThrombosisTirofibanPlatelet ActivationMolecular biologyComplementarity Determining RegionsMice Inbred C57BLTirofibanImmunologyEptifibatidePlatelet aggregation inhibitorTyrosineCardiology and Cardiovascular MedicineGlycoprotein IIb/IIIaPeptidesPlatelet Aggregation Inhibitorsmedicine.drugCirculation research
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