Search results for "omics"

showing 10 items of 17130 documents

Evaluación del índice de pobreza hídrica (WPI) en la cuenca de Borujerd-Dorood (Irán) para reforzar los planes de gestión del territorio

2021

El Índice de Pobreza Hídrica (WPI) se considera, en general, una herramienta simple y clara para evaluar los efectos de factores combinados sobre la escasez de agua y la tensión de los recursos hídricos. En esta investigación, intentamos centrarnos en las problemáticas hídricas en las cabeceras de montaña de la cuenca de Karoon en Irán para analizar el estado de los recursos hídricos. Para este propósito, los datos requeridos se obtuvieron en primer lugar mediante la preparación de un informe de la Autoridad del Agua, la parte Agrícola y la Organización de Agua y Saneamiento del Condado de Borujerd. Luego, se estimó el valor del WPI a escala de subcuenca del río Karoon considerando como rec…

0106 biological sciencesResource (biology)Index (economics)WatershedEcologybusiness.industryÍndice de pobreza hídricaproblemática hídrica04 agricultural and veterinary sciences01 natural sciencesWater scarcity010601 ecologyWater resourcesHydrology (agriculture)GeographyAgriculture040103 agronomy & agriculturerecursos hídricos de montaña0401 agriculture forestry and fisheriesWater resource managementbusinesscuenca del río KaroonEcology Evolution Behavior and SystematicsEnvironmental qualityQH540-549.5Pirineos: Revista de Ecología de Montaña
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Organelle protein changes in arbuscular mycorrhizal Medicago truncatula roots as deciphered by subcellular proteomics

2019

Prod 2020-8c SPE IPM INRA UB CNRS; The roots of most land plants can enter a symbiotic relationship with arbuscular mycorrhizal (AM) soil‐borne fungi belonging to the phylum Glomeromycota, which improves the mineral nutrition of the host plant. The fungus enters the root through the epidermis and grows into the cortex where it differentiates into a highly branched hyphal structure called the arbuscule. The role of the plant membrane system as the agent for cellular morphogenesis and signal/nutrient exchanges is especially accentuated during AM endosymbiosis. Notably, fungal hyphae are always surrounded by the host membrane, which is referred to as the perifungal membrane around intracellula…

0106 biological sciencesRhizophagus irregularis[SDV]Life Sciences [q-bio]BiologyProteomicsplasma membrane01 natural sciences03 medical and health sciencesroot plastidsBotanyOrganelle[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyRhizophagus irregularismicrosomesShotgun proteomics030304 developmental biology0303 health sciencesspectral countingSpectral countingfungifood and beveragesbiology.organism_classificationMedicago truncatulashotgun proteomicscellular fractionation methods[SDE]Environmental SciencesArbuscular mycorrhizal010606 plant biology & botany
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A Network Model for the Correlation between Epistasis and Genomic Complexity

2008

The study of genetic interactions (epistasis) is central to the understanding of genome organization and evolution. A general correlation between epistasis and genomic complexity has been recently shown, such that in simpler genomes epistasis is antagonistic on average (mutational effects tend to cancel each other out), whereas a transition towards synergistic epistasis occurs in more complex genomes (mutational effects strengthen each other). Here, we use a simple network model to identify basic features explaining this correlation. We show that, in small networks with multifunctional nodes, lack of redundancy, and absence of alternative pathways, epistasis is antagonistic on average. In c…

0106 biological sciencesSilent mutationGenome evolutionDNA Mutational Analysislcsh:MedicineBiology010603 evolutionary biology01 natural sciencesGenomeModels BiologicalCorrelation03 medical and health sciencesComputational Biology/Metabolic NetworksGenetics and Genomics/Population GeneticsAnimalsHumanslcsh:Science030304 developmental biologyGenomic organization0303 health sciencesEvolutionary BiologyMultidisciplinaryComputational Biology/Systems BiologyGenomeEvolutionary Biology/Evolutionary and Comparative GeneticsModels GeneticHuman evolutionary geneticsSystems Biologylcsh:RRobustness (evolution)Computational BiologyGenetics and GenomicsEpistasis GeneticGenomicsModels TheoreticalEvolutionary biologyMutationEpistasislcsh:QAlgorithmsResearch ArticlePLoS ONE
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Social equity and marine protected areas: Perceptions of small-scale fishermen in the Mediterranean Sea

2020

Abstract Global conservation policy requires the scaling up of effectively and equitably managed networks of marine protected areas (MPAs). While progress has been made on spatial coverage, the fundamental aspects of effectiveness and equity are falling short. Past research has focused on management effectiveness in MPAs, but less attention has been given to social equity though it is an ethical imperative and instrumental to conservation. This study assessed the perceptions of SSF regarding recognitional, procedural and distributional dimensions of social equity using quantitative surveys in 11 MPAs across 6 countries on the Mediterranean Sea. To do so, we developed individual indicators f…

0106 biological sciencesSocial equitymedia_common.quotation_subjectPositive perception010603 evolutionary biology01 natural sciencesMediterranean seaPerception14. Life underwaterMarine protected areas management and organization; Environmental governance; Small-scale fisheries; Conservation social science; Social equityEcology Evolution Behavior and SystematicsEnvironmental governanceNature and Landscape Conservationmedia_commonSmall-scale fisheriesEquity (economics)Public economicsStakeholder perceptions010604 marine biology & hydrobiologyConservation social scienceConservation social science Environmental governance Marine protected areas Protected area management Small-scale fisheries Social equityLivelihoodGeographyMarine protected areas management and organizationMarine protected areaSocial equalityBiological Conservation
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Descriptors of Posidonia oceanica meadows: Use and application

2005

This work benefited partly from the financial support of the European program ΓNTERREG IIIA Corsica, Sardinia. Tuscany

0106 biological sciencesStandardizationProcess (engineering)Computer sciencemedia_common.quotation_subjectGeneral Decision SciencesDistribution (economics)Coastal biodiversity conservation010501 environmental sciences01 natural scienceslimits; advantages; mediterranean sea; bioindicator; posidonia oceanica; standardized methodsLittoral zoneQuality (business)14. Life underwaterMarine ecosystem managementEcology Evolution Behavior and Systematics0105 earth and related environmental sciencesmedia_commonValuation (finance)Indicators (Biology)Ecologybiologybusiness.industryEcology010604 marine biology & hydrobiologyScale (chemistry)Environmental resource managementPosidonia oceanica15. Life on landbiology.organism_classificationPosidonia oceanicaPosidonia oceanica Mediterranean sea Bioindicator Standardized methods Advantages Limitsbusiness
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Vegetation of feather grass steppes in the western Pamir Alai Mountains (Tajikistan, Middle Asia)

2016

Aims: To propose the first syntaxonomical scheme for the graminoid steppe vegetation of the montane and alpine zones in the Pamir-Alai Mts. in Tajikistan with some remarks on its environmental gradients. Location: Tajikistan. Methods: A total of 155 relevés were sampled in 2015 using the seven-degree cover-abundance scale of Braun-Blanquet and subsequently 148 of these relevés were selected and classified by the modified TWINSPAN method using the four step interval scale with cutoff levels of 0%, 5%, 10% and 25% and total inertia as a measure of cluster heterogeneity. Diagnostic species were identified using the phi coefficient as a fidelity measure. The detrended correspondance analysis wa…

0106 biological sciencesSteppeMiddle asialocation.countryalpine vegetationstipaPlant Science010603 evolutionary biology01 natural sciencesGrasslandlocation0502 economics and businessmedicineTadzhikistansyntaxonomygeography.geographical_feature_categoryTadzhikistanbiologyStipa05 social sciencesForestrybiology.organism_classificationGeographyFeathervisual_artvisual_art.visual_art_mediumStipamedicine.symptomgrasslandVegetation (pathology)050203 business & managementPhytocoenologia : International Journal for Vegetation Survey and Classification
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Flower abscission in Vitis vinifera L. triggered by gibberellic acid and shade discloses differences in the underlying metabolic pathways

2015

Understanding abscission is both a biological and an agronomic challenge. Flower abscission induced independently by shade and gibberellic acid (GAc) sprays was monitored in grapevine (Vitis vinifera L.) growing under a soilless greenhouse system during two seasonal growing conditions, in an early and late production cycle. Physiological and metabolic changes triggered by each of the two distinct stimuli were determined. Environmental conditions exerted a significant effect on fruit set as showed by the higher natural drop rate recorded in the late production cycle with respect to the early cycle. Shade and GAc treatments increased the percentage of flower drop compared to the control, and …

0106 biological sciencesSucrosePlant Sciencelcsh:Plant cultureBiologyCarbohydrate metabolism01 natural sciences03 medical and health scienceschemistry.chemical_compoundAbscissionBotanylcsh:SB1-1110inflorescenceRaffinoseGibberellic acidOriginal Research030304 developmental biology2. Zero hungerchemistry.chemical_classification0303 health sciencesthinningfungifood and beveragesTricarboxylic acid15. Life on landmetabolomicsgrapevineabscissionabscission gibberellic acid grapevine inflorescence metabolomics shade thinningSettore AGR/03 - Arboricoltura Generale E Coltivazioni ArboreeMetabolic pathwaychemistryInflorescenceshadegibberellic acid010606 plant biology & botanyFrontiers in Plant Science
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The aquaculture supply chain in the time of covid-19 pandemic: Vulnerability, resilience, solutions and priorities at the global scale

2022

13 pages, 3 tables, 5 figures

0106 biological sciencesSupply chainEconomic distressGeography Planning and DevelopmentVulnerabilityCOVID-19 effectsDistribution (economics)Rapid assessmentManagement Monitoring Policy and Law01 natural sciencesArticleIntegrated multi-trophic aquaculture03 medical and health sciencesStakeholder perceptionsMitigation measuresZoología14. Life underwaterResilience (network)Baseline (configuration management)Perishable food supply chainEnvironmental planning030304 developmental biology2. Zero hunger0303 health sciencesFood securitybusiness.industry010604 marine biology & hydrobiologyCOVID-19 effects Disruption Economic distress Integrated multi-trophic aquaculture Mitigation measures Perishable food supply chain Rapid assessment Stakeholder perceptions13. Climate actionAgricultureScale (social sciences)DisruptionBusiness
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Distribution, diversity patterns and faunogenesis of the millipedes (Diplopoda) of the Himalayas

2018

The Himalayas support a highly rich, diverse, multi-layered, mostly endemic diplopod fauna which presently contains >270 species, 53 genera, 23 families and 13 orders. This is the result of mixing the ancient, apparently Tertiary and younger, Plio-Pleistocene elements of various origins, as well as the most recent anthropochore (= man-mediated) introductions. At the species and, partly, generic levels, the fauna is largely autochthonous and sylvicolous, formed through aboundingin situradiation and vicariance events. In general, the species from large genera and families tend to occupy a wide range of altitudes, but nearly each of the constituent species shows a distribution highly lo…

0106 biological sciencesSympatryAsiaArthropodaRange (biology)Fauna010607 zoologyDistribution (economics)010603 evolutionary biology01 natural sciencesDiplopodalcsh:ZoologyVicariancefaunisticsAnimalialcsh:QL1-991Ecology Evolution Behavior and Systematicsbusiness.industryEcologyPlio-PleistocenePalaearcticGeographyPlio-PleistoceneAnimal Science and ZoologybusinessResearch Article
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Reconstruction and analysis of genome-scale metabolic model of a photosynthetic bacterium

2010

Abstract Background Synechocystis sp. PCC6803 is a cyanobacterium considered as a candidate photo-biological production platform - an attractive cell factory capable of using CO2 and light as carbon and energy source, respectively. In order to enable efficient use of metabolic potential of Synechocystis sp. PCC6803, it is of importance to develop tools for uncovering stoichiometric and regulatory principles in the Synechocystis metabolic network. Results We report the most comprehensive metabolic model of Synechocystis sp. PCC6803 available, iSyn669, which includes 882 reactions, associated with 669 genes, and 790 metabolites. The model includes a detailed biomass equation which encompasses…

0106 biological sciencesSystems biologyIn silicoMetabolic networkComputational biologyBiologyModels Biological01 natural sciencesMetabolic engineeringGene Knockout Techniques03 medical and health sciencesStructural BiologyModelling and Simulation010608 biotechnologyBotanyBiomassPhotosynthesislcsh:QH301-705.5Molecular Biology030304 developmental biologyAutotrophic Processes0303 health sciencesGene Expression ProfilingApplied MathematicsSynechocystisSynechocystisGenomicsDarknessbiology.organism_classificationComputer Science ApplicationsFlux balance analysislcsh:Biology (General)Genes BacterialAutotrophic ProcessesModeling and SimulationEnergy sourceGenome BacterialResearch ArticleBMC Systems Biology
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