Search results for "viroid"

showing 10 items of 22 documents

Phylogeny of viroids, viroidlike satellite RNAs, and the viroidlike domain of hepatitis delta virus RNA.

1991

We report a phylogenetic study of viroids, some plant satellite RNAs, and the viroidlike domain of human hepatitis delta virus RNA. Our results support a monophyletic origin of these RNAs and are consistent with the hypothesis that they may be "living fossils" of a precellular RNA world. Moreover, the viroidlike domain of human hepatitis delta virus RNA appears closely related to the viroidlike satellite RNAs of plants, with which it shares some structural and functional properties. On the basis of our phylogenetic analysis, we propose a taxonomic classification of these RNAs.

GeneticsMultidisciplinaryPhylogenetic treeRNABiologyVirusoidVirologyModels BiologicalVirusViroidsDomain (software engineering)MonophylyPhylogeneticsRNARNA SatelliteRNA ViralHepatitis Delta VirusLiving fossilPhylogenyResearch Article
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A Review of the Most Common and Economically Important Diseases That Undermine the Cultivation of Tomato Crop in the Mediterranean Basin

2021

Tomato (Solanum lycopersicum L.), family Solanaceae, has become in the past fifty years one of the most important and extensively grown horticultural crops in the Mediterranean region and throughout the world. In 2019, more than 180 million tonnes of tomato have been produced worldwide, out of which around 42 million tonnes in Mediterranean countries. Due to its genetic properties, tomato is afflicted by numerous plant diseases induced by fungal, bacterial, phytoplasma, virus, and viroid pathogens. Not only is its genetic inheritance of great importance to the management of the numerous tomato pathogens, but equally as important are also the present climate changes, the recently revised phy…

Mediterranean climatePhytoplasmadetectionviroidsDistribution (economics)Early detectioncrop managementDiseaseMediterranean BasinCropvirusesbacteriaphytoplasmasViroidtomato diseasesTomato diseasebiologySAgroforestrybusiness.industryfungiSettore AGR/12 - Patologia Vegetalefood and beveragesAgriculturebiology.organism_classificationclimate changePhytoplasmafungiSolanumbusinessAgronomy and Crop ScienceAgronomy
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Extremely high mutation rate of a hammerhead viroid

2009

Supporting information (Materials and methods, figs. S1-S3, suppl. references) available at: http://www.sciencemag.org/cgi/data/323/5919/1308/DC1/1

Mutation rateViroidvirusesMolecular Sequence DataPopulationChrysanthemum chlorotic mottle viroidGenome ViralVirus ReplicationMutation ratesRNA CatalyticRepliconSelection GeneticeducationGeneticseducation.field_of_studyMultidisciplinarybiologyReverse Transcriptase Polymerase Chain ReactionRibozymeRNAbiology.organism_classificationVirologyViroidsReplication fidelityAvsunviroidaeHammerhead ribozymesMutationMutation (genetic algorithm)biology.proteinNucleic Acid ConformationRNA ViralRepliconRNA replication
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Effects of Citrus Exocortis Viroid Infection on the Peroxidase/IAA-Oxidase System of Gynura aurantiaca and Lycoperszcon esculentum

1987

Summary The peroxidase/indoleacetic acid (IAA) oxidase system of plants of Gynura aurantiaca and Lycopersicon esculentum healthy and infected by citrus exocortis viroid (CEV) was studied. In these hosts, the infection induced an increase of both enzymic activities, when they were measured between 40 and 50 d post inoculation. The analysis of isozyme composition by polyacrylamide gel electrophoresis and specific staining of peroxidase revealed an intensification of most of the zymogram bands as well as the premature appearance of one of the isozymes in the two plants investigated. All the tomato isoperoxidases exhibited IAA-oxidase activity when measured with the oxygen electrode. These resu…

Oxidase testbiologyViroidInoculationfood and beveragesGeneral MedicineGeneral Chemistrybiology.organism_classificationIsozymeLycopersiconBiochemistrybiology.proteinGynura aurantiacaPolyacrylamide gel electrophoresisPeroxidaseBiochemie und Physiologie der Pflanzen
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Intranukleäre virusähnliche Partikeln in einem Mammakarzinom

1969

By electron microscopic examination of a solid, chiefly scirrhous mammary cancer, 3 kinds of unusual nuclear inclusions were found: (a) Electron dense particles of a 54–80 nm diameter, whose outlines appear mainly hexagonal, which points at an icosahedral structure, (b) Clusters of granules with a diameter of 200–300a, respectively 300–400a, at whose circumference the larger particles appear, (c) Bundles of filaments in close association and continuous with the granules. In all 3 nuclear inclusions there are subunits of 40–45a. The comparison between these results and experiments published suggest that these nuclear inclusions are (a) virus particles, (b) virus at an early stage of developm…

PharmacologybiologyChemistryViroidIcosahedral symmetryHexagonal crystal systemCell Biologybiology.organism_classificationVirusCellular and Molecular NeuroscienceCrystallographyMolecular MedicineMolecular BiologyElectron microscopicVirus ProteinExperientia
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Might exogenous circular RNAs act as protein-coding transcripts in plants?

2021

Circular RNAs (circRNAs) are regulatory molecules involved in the modulation of gene expression. Although originally assumed as non-coding RNAs, recent studies have evidenced that animal circRNAs can act as translatable transcripts. The study of plant-circRNAs is incipient, and no autonomous coding plant-circRNA has been described yet. Viroids are the smallest plant-pathogenic circRNAs known to date. Since their discovery 50 years ago, viroids have been considered valuable systems for the study of the structure-function relationships in RNA, essentially because they have not been shown to have coding capacity. We used two pathogenic circRNAs (Hop stunt viroid and Eggplant latent viroid) as …

Protein codingViroid-derived peptidesPlant coding circRNAsvirusesfood and beveragesRNA CircularCell BiologyPlantsBiologyVirus ReplicationPlant pathogenic RNAsViroidsPlant VirusesRegulatory moleculesCell biologyNon canonical transcriptsGene expressionRNA ViralSolanum melongenaPoint of ViewMolecular BiologyCircular RNAsPlant DiseasesArticle Commentary
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RNAs That Behave Like Prions

2020

The term “prion” was originally coined to describe the proteinaceous infectious agents involved in mammalian neurological disorders. More recently, a prion has been defined as a nonchromosomal, protein-based genetic element that is capable of converting the copies of its own benign variant into the prion form, with the new phenotypic effects that can be transmitted through the cytoplasm. Some prions are toxic to the cell, are able to aggregate and/or form amyloid structures, and may be infectious in the wild, but none of those traits are seen as an integral property of all prions. We propose that the definition of prion should be expanded, to include the inducible transmissible entities und…

RiboswitchMolecular Biology and PhysiologyAmyloidProtein ConformationPrionsanimal diseaseslcsh:QR1-502viroidsPiwi-interacting RNApiRNABiologyribozymesMicrobiologylcsh:Microbiology03 medical and health sciencesMice0302 clinical medicineAnimalsHumansRibozymesprionsMolecular Biology030304 developmental biologyGenetics0303 health sciencesRibozymeRNAOpinion/HypothesisPhenotypeViroidsQR1-502nervous system diseasesCytoplasmbiology.proteinGenetic elementRNA030217 neurology & neurosurgerymSphere
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New protocol to dectect citrus viroid.

2004

ViroidSettore AGR/12 - Patologia Vegetale
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First report of Cucumber mosaic virus infecting Solanum jasminoides in Italy

2008

Solanum jasminoides Paxton (potato vine or jasmine nightshade) is a vegetatively propagated ornamental species within the Solanaceae family. Recently, symptomless plants of this species were reported as natural hosts of the quarantine pest, Potato spindle tuber viroid (PSTVd) in Italy (1). In January 2008, approximately 1,000 potted, 2-year-old plants of S. jasminoides growing in an ornamental nursery in Sicily showed virus-like mosaic and malformation of leaves. Symptoms were observed on approximately 60% of the plants. Leaf tissue, collected from 30 symptomatic and 10 symptomless plants, was analyzed by double-antibody sandwich-ELISA with polyclonal antisera specific to Cucumber mosaic v…

biologyfungiCMVSettore AGR/12 - Patologia Vegetalefood and beveragesPlant Sciencebiology.organism_classificationCucumber mosaic virusHorticulturePlant virusBotanyOrnamental plantPEST analysisSolanumImpatiens necrotic spot virusAgronomy and Crop SciencePotato spindle tuber viroidSolanaceae
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Parsimonious scenario for the emergence of viroid-like repliconsde novo

2019

AbstractViroids are small, non-coding, circular RNA molecules that infect plants. Different hypotheses for their evolutionary origin have been put forward, such as an early emergence in a precellular RNA World or severalde novoindependent evolutionary origins in plants. Here we discuss the plausibility ofde novoemergence of viroid-like replicons by giving theoretical support to the likelihood of different steps along a parsimonious evolutionary pathway. While Avsunviroidae-like structures are relatively easy to obtain through evolution of a population of random RNA sequences of fixed length, rod-like structures typical of Pospiviroidae are difficult to fix. Using different quantitative appr…

education.field_of_studybiologyViroidvirusesPospiviroidaePopulationRNAComputational biologybiology.organism_classificationCircular RNAbiology.proteinRepliconSequence motifeducationPolymerase
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