0000000000147504

AUTHOR

Rosario Miralles

showing 7 related works from this author

Multiple infection dynamics has pronounced effects on the fitness of RNA viruses

2001

Several factors play a role during the replication and transmission of RNA viruses. First, as a consequence of their enormous mutation rate, complex mixtures of genomes are generated immediately after infection of a new host. Secondly, differences in growth and competition rates drive the selection of certain genetic variants within an infected host. Thirdly, but not less important, a random sampling occurs at the moment of viral infectious passage from an infected to a healthy host. In addition, the availability of hosts also influences the fate of a given viral genotype. When new hosts are scarce, different viral genotypes might infect the same host, adding an extra complexity to the comp…

GeneticsMutation rateExperimental evolutionViral pathogenesisRNABiologymedicine.diseasemedicine.disease_causeVirologySuperinfectionViral evolutionMutation (genetic algorithm)CoinfectionmedicineEcology Evolution Behavior and SystematicsJournal of Evolutionary Biology
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Is group selection a factor modulating the virulence of RNA viruses?

1997

RNA viruses consist of populations of extremely high genetic heterogeneity called quasispecies. Based on theoretical considerations, it has been suggested that the unit of selection in such complex genetic populations is not the single viral particle but a set of genetically related particles which form the quasispecies. In the present study we carried out a set of experiments with the vesicular stomatitis virus (VSV) dealing with the evolution of life-history characters under selection acting at two factors either in the same or in opposite directions. The two factors at which selective pressure is applied are the individual and the group. We show evidence that group selection modulates th…

GeneticsModels GeneticVirulenceGenetic heterogeneityRNAVirulenceUnit of selectionGeneral MedicineViral quasispeciesBiologybiology.organism_classificationVesicular stomatitis Indiana virusGroup selectionGenetics PopulationVesicular stomatitis virusMultivariate AnalysisGeneticsRNA VirusesSelection GeneticSelection (genetic algorithm)Genetical research
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Effect of population patchiness and migration rates on the adaptation and divergence of vesicular stomatitis virus quasispecies populations

1999

The effect of migration among different isolated virus quasispecies populations on their adaptation and diversity was analysed through experimental evolution. Anin vitrocell system was employed to simulate migration of vesicular stomatitis virus between isolated homogeneous host cell populations. The results clearly demonstrated a positive correlation between the migration rate and the magnitude of the mean fitness reached by the virus quasispecies populations. The results also showed, although less clearly, that fitness differences among quasispecies decreased with the magnitude of migration. These results are in close agreement with predictions of standard population genetics theory. Thes…

PopulationAdaptation BiologicalViral quasispeciesBiologyVesicular stomatitis Indiana virusVirusCell LineDivergenceViral Envelope ProteinsCricetinaeVirologyTumor Cells CulturedAnimalsHumanseducationGeneticseducation.field_of_studyExperimental evolutionMembrane GlycoproteinsModels GeneticGenetic Variationbiology.organism_classificationVirologyHomogeneousVesicular stomatitis virusDirected Molecular EvolutionAdaptationJournal of General Virology
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Clonal Interference and the Evolution of RNA Viruses

1999

In asexual populations, beneficial mutations that occur in different lineages compete with one another. This phenomenon, known as clonal interference, ensures that those beneficial mutations that do achieve fixation are of large effect. Clonal interference also increases the time between fixations, thereby slowing the adaptation of asexual populations. The effects of clonal interference were measured in the asexual RNA virus vesicular stomatitis virus; rates and average effects of beneficial mutations were quantified.

GeneticsLikelihood FunctionsModels StatisticalMultidisciplinaryGenes ViralbiologyClonal interferenceRNARNA virusVirus Replicationbiology.organism_classificationAdaptation PhysiologicalBiological EvolutionModels BiologicalVesicular stomatitis Indiana virusCell LineGene FrequencyVesicular stomatitis virusCricetinaeMutationConfidence IntervalsAnimalsScience
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The evolution of RNA viruses: A population genetics view.

2000

RNA viruses are excellent experimental models for studying evolution under the theoretical framework of population genetics. For a proper justification of this thesis we have introduced some properties of RNA viruses that are relevant for studying evolution. On the other hand, population genetics is a reductionistic theory of evolution. It does not consider or make simplistic assumptions on the transformation laws within and between genotypic and phenotypic spaces. However, such laws are minimized in the case of RNA viruses because the phenotypic space maps onto the genotypic space in a much more linear way than on higher DNA-based organisms. Under experimental conditions, we have tested th…

GeneticsMultidisciplinarybiologyvirusesRNAPopulation geneticsGenetic Variationbiology.organism_classificationBiological EvolutionVirusEffective population sizeVesicular stomatitis virusMolecular evolutionViral evolutionColloquium PaperGenetic variationRNA VirusesProceedings of the National Academy of Sciences of the United States of America
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Diminishing Returns of Population Size in the Rate of RNA Virus Adaptation

2000

ABSTRACT Whenever an asexual viral population evolves by adapting to new environmental conditions, beneficial mutations, the ultimate cause of adaptation, are randomly produced and then fixed in the population. The larger the population size and the higher the mutation rate, the more beneficial mutations can be produced per unit time. With the usually high mutation rate of RNA viruses and in a large enough population, several beneficial mutations could arise at the same time but in different genetic backgrounds, and if the virus is asexual, they will never be brought together through recombination. Thus, the best of these genotypes must outcompete each other on their way to fixation. This c…

Mutation rateAdolescentImmunologyPopulationBiologyVirus ReplicationModels BiologicalMicrobiologyVesicular stomatitis Indiana virusCell LineCricetinaeVirologyAnimalsHumanseducationGeneticseducation.field_of_studyModels StatisticalClonal interferencePopulation sizeRNARNA virusbiology.organism_classificationAdaptation PhysiologicalBiological EvolutionFixation (population genetics)Vesicular stomatitis virusInsect ScienceMutationRecombination and EvolutionJournal of Virology
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Frequency-Dependent Selection in a Mammalian RNA Virus

1997

RNA viruses have been used as experimental systems to test evolutionary hypotheses such as Muller's ratchet (Chao 1990; Duarte et al. 1992, 1993; Clarke et al. 1993), the Red Queen hypothesis (Clarke et al. 1994), the nature of the adaptive topography (Elena, 1995; Elena et al. 1996), and the dynamics of adaptive evolution (Elena 1995; Novella et al. 1995). Two hypotheses which have received attention in virus studies are the competitive exclusion principle and frequency-dependent selection. The competitive exclusion principle (Hardin 1960) states that two populations or species competing for the same limiting resource cannot stably coexist because one competitor will displace the other. An…

0106 biological sciences0301 basic medicineeducation.field_of_studyExperimental evolutionmedia_common.quotation_subjectPopulationFrequency-dependent selectionViral quasispeciesBiology010603 evolutionary biology01 natural sciencesCompetition (biology)03 medical and health sciences030104 developmental biologyCompetitive exclusion principleEvolutionary biologyRed Queen hypothesisGeneticseducationGeneral Agricultural and Biological SciencesSelection (genetic algorithm)Ecology Evolution Behavior and Systematicsmedia_commonEvolution
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