0000000000267611

AUTHOR

D. Van Tuinen

showing 9 related works from this author

Medicago species affect the community composition of arbuscular mycorrhizal fungi associated with roots

2007

National audience; The symbiosis between plants and arbuscular mycorrhizal fungi (AMF) is ancient and involves 80% of terrestrial plant families. The symbiotic association between AMF and plants was described to be non specific. However, AMF were reported to influence plant community diversity and productivity. On the other way, the effect of plant genotypes belonging to closely related species on AMF diversity has not been explored so far. The aim of this work was to assess the impact of four different Medicago species, M. laciniata, M. murex, M. polymorpha and M. truncatula cv. Jemalong J5, on the composition of AM fungal community, when cultivated in a silty-thin clay soil (Mas d’Imbert,…

[SDE] Environmental SciencesGenotypeANNUAL MEDICSPhysiology[SDV]Life Sciences [q-bio]Bulk soilQUANTITATIVE POLYMERASE CHAIN REACTIONPlant ScienceBiologyMEDICAGODNA RibosomalPlant RootsLARGE RIBOSOMAL SUBINIT RIBOSOMAL DEOXYRIBONUCLEIC ACID (LSU RDNA)03 medical and health sciencesARBUSCULAR MYCORRHIZAL (AM) FUNGISpecies SpecificityMedicago laciniataMycorrhizaeLarge ribosomal subunitBotany[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyMedicago polymorpha[SDV.BV] Life Sciences [q-bio]/Vegetal BiologyPhylogenyGlomusDNA PrimersGene Library030304 developmental biology0303 health sciencesMedicagofungiGenetic Variationfood and beverages04 agricultural and veterinary sciences15. Life on landRIBOBOMAL DEOXYRIBONUCLEIC ACID (LSU RDNU)biology.organism_classificationMedicago truncatula[SDV.BV.PEP]Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacy[SDV] Life Sciences [q-bio]LARGE RIBOSOMAL SUBINIT[SDE]Environmental Sciences040103 agronomy & agriculture0401 agriculture forestry and fisheriesGENETIC DIVERSITYQUANTITATIVE POLYMERASCHAIN REACTIONMedicago murex
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Isolation and partial characterization of antagonistic peptides produced by Paenibacillus sp. strain B2 isolated from the sorghum mycorrhizosphere.

2005

ABSTRACT Paenibacillus sp. strain B2, isolated from the mycorrhizosphere of sorghum colonized by Glomus mosseae , produces an antagonistic factor. This factor has a broad spectrum of activity against gram-positive and gram-negative bacteria and also against fungi. The antagonistic factor was isolated from the bacterial culture medium and purified by cation-exchange, reverse-phase, and size exclusion chromatography. The purified factor could be separated into three active compounds following characterization by amino acid analysis and by combined reverse-phase chromatography and mass spectrometry (liquid chromatography-mass spectrometry and mass spectrometry-mass spectrometry). The first com…

Polymyxin B1medicine.drug_classPolymyxinSize-exclusion chromatographyPeptideTripeptideMicrobial Sensitivity TestsGram-Positive BacteriaApplied Microbiology and BiotechnologyPeptides CyclicPlant RootsPaenibacillusFusariumAntibiosisGram-Negative BacteriamedicineEnvironmental MicrobiologyPolymyxinsThreonineSoil MicrobiologySorghumchemistry.chemical_classificationEcologyMolecular massbiologybiology.organism_classificationBiochemistrychemistryFood ScienceBiotechnologyApplied and environmental microbiology
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Erratum to “Hydrolytic enzyme activity of Paenibacillus sp. strain B2 and effects of the antagonistic bacterium on cell integrity of two soil-borne p…

2001

Ce texte contient des corrections apportées à l'article " Hydrolytic enzyme activity of Paenibacillus sp. strain B2 and effects of the antagonistic bacterium on cell integrity of two soil-borne pathogenic fungi" sorti dans le numéro 15 du journal "Applied Soil Ecology" sorti en 2000.

EcologyStrain (chemistry)Soil ScienceBiologybiology.organism_classificationAgricultural and Biological Sciences (miscellaneous)Enzyme assayMicrobiologyHydrolysisSoil borneBotanyCell integritybiology.proteinPaenibacillus sp.Bacteria
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Structural and functional genomics of symbiotic arbuscular mycorrhizal fungi.

2004

The absorbing organs (roots, rhizomes) of nearly all terrestrial plant families host an intimate symbiotic association, called a mycorrhiza, with specialized functional groups of soil fungi. The most common type of root symbiosis is the arbuscular mycorrhiza where soil fungi interact with a tremendous diversity of plant species, including many forest trees and agricultural, horticultural, and fruit crops (Gianinazzi et al., 2002). The fungi involved are very ancient microorganisms compared to other true fungi. Fossil data and molecular phylogenetic analyses indicate that their origin dates back to the Ordovician-Devonian era some 460 to 400 million years ago (Remy et al., 1994; Redecker et …

GlomeromycotaEntrophosporabiologyAcaulosporaceaeBotanyAcaulosporaGlomeralesMycorrhizabiology.organism_classificationGlomusGigasporaceae
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Actin in Allomyces arbuscula

1991

International audience; A 42 kDa protein was isolated by affinity chromatography on DNAse I-Sepharose from 24-h-old mycelia of Allomyces arbuscula. It was identified as actin by immunoblots with monoclonal antibody probe against a chicken gizzard actin. This fungal actin has a pI of 5.9 and separates into two spots on two-dimensional polyacrylamide gel electrophoresis, suggesting its dual nature. It can polymerize into 8-10 nm filaments visualized by electron microscopy.

[SDE] Environmental Sciencesmedicine.drug_classAllomyces[SDV]Life Sciences [q-bio]Plant Sciencemacromolecular substancesMonoclonal antibodylaw.invention03 medical and health sciencesAffinity chromatographylawGeneticsmedicine[SDV.BV]Life Sciences [q-bio]/Vegetal Biology[SDV.BV] Life Sciences [q-bio]/Vegetal BiologyPolyacrylamide gel electrophoresisEcology Evolution Behavior and SystematicsActin030304 developmental biologyGel electrophoresis0303 health sciencesbiology030306 microbiologybiology.organism_classificationMolecular biologyActina[SDV] Life Sciences [q-bio]Biochemistry[SDE]Environmental SciencesElectron microscopeBiotechnology
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25S rDNA-based molecular monitoring of glomalean fungi in sewage sludge-treated field plots

2001

Recycling of sewage wastes in agriculture is likely to affect the biological activity of soils through contamination of ecosystems by pathogens and metallic or organic micropollutants. The impact of sewage sludge spreading under field conditions on arbuscular mycorrhiza (AM) formation by a community of glomalean fungi was evaluated using a nested polymerase chain reaction (PCR) and discriminating primers based on 25S rDNA polymorphisms to detect different fungal species within root systems. Medicago truncatula was grown in soil of field plots amended or not with a composted sewage sludge, spiked or not with organic or metallic micropollutants. Overall AM development in roots decreased with …

0106 biological sciencesSewageRoot systemPlant RootsPolymerase Chain Reaction01 natural sciencesMicrobiologyGLOMALESADN RIBOSOMIALSoil PollutantsDNA FungalSymbiosisRelative species abundance[SDV.MP] Life Sciences [q-bio]/Microbiology and ParasitologySoil MicrobiologyComputingMilieux_MISCELLANEOUSEcology Evolution Behavior and Systematics2. Zero hungerPollutantSewagebiologybusiness.industryEcologyfungiFungiAgricultureFabaceae04 agricultural and veterinary sciences15. Life on landContaminationbiology.organism_classificationArbuscular mycorrhizaBiodegradation Environmental[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyRNA Ribosomal13. Climate actionEnvironmental chemistrySoil water040103 agronomy & agriculture0401 agriculture forestry and fisheriesbusinessSludgeEnvironmental Monitoring010606 plant biology & botany
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Signalling between arbuscular mycorrhizal fungi and plants: Identification of a gene expressed during early interactions by differential RNA display …

2002

Although there is evidence for an interplay of signalling/recognition events at different stages during plant/fungal interactions in arbuscular mycorrhiza, the nature of signalling molecules and signal perception/transduction processes are so far unknown. Virtually nothing is known of molecular interactions during initial contact between arbuscular mycorrhizal symbionts, but plant mutants which limit fungal development to these first steps (myc-1) provide proof of the involvement of plant genes. One such pea mutant (P2) has been used to investigate gene expression during early plant-fungal interactions by differential RNA display. Partial transcriptome analysis has indicated frequent simila…

GeneticsbiologyfungiMutantfood and beveragesRNAbiology.organism_classificationArbuscular mycorrhizaTranscriptomeSymbiosisGene expressionBotanyGeneGlomus
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Hydrolytic enzyme activity of Paenibacillus sp. strain B2 and effects of the antagonistic bacterium on cell integrity of two soil-borne pathogenic fu…

2000

Paenibacillus sp. strain B2, isolated from the mycorrhizosphere of Sorghum bicolor and having an antagonistic activity towards soil-borne fungal pathogens, possessed extracellular cellulolytic, proteolytic, chitinolytic and pectinolytic enzyme activities. The eventual role of these lytic enzymes in cellular interactions between Paenibacillus sp. strain B2 and Phytophthora parasitica and Fusariumoxysporum was investigated by electron microscopy and molecular cytology. Electron microscopic observations showed that the presence of Paenibacillus sp. strain B2 resulted in disorganisation of cell walls and/or cell contents of P. parasitica and F. oxysporum. However, when P. parasitica was treated…

medicine.medical_treatment[SDV]Life Sciences [q-bio]Soil ScienceCellulaseBiologyMicrobiology03 medical and health sciencesPaenibacillusFusarium oxysporumHydrolytic enzymesmedicinePectinaseWall metabolismMyceliumComputingMilieux_MISCELLANEOUS030304 developmental biology0303 health sciencesProteaseEcologyStrain (chemistry)030306 microbiologyfungifood and beveragesPhytophthora parasiticabiology.organism_classificationAgricultural and Biological Sciences (miscellaneous)Fusarium oxysporumCell integrityChitinasebiology.proteinPaenibacillus sp. strain B2
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Biodiversity and characterization of arbuscular mycorrhizal fungi at the molecular level

1994

Biodiversity within a biological group provides the basis for distinguishing members into genera and species according to taxonomic criteria, and between individuals within a species depending on more detailed differences at the genetic level. Diversity between species occurs after a genetic barrier has been created either by a geographic or genetic impedance of gene flow. Divergence can continue by nucleotide substitutions and by mutations in a broader sense (deletions, translocations, duplications), and resulting diversity can be evaluated at the molecular level and used as a phylogenetic character. Diversity at the subspecies level is a function of both mutation rates and gene flow betwe…

[SDE] Environmental Sciences0303 health sciencesMutation ratePhylogenetic treemedia_common.quotation_subject[SDV]Life Sciences [q-bio]BiodiversityChromosomal translocationSubspeciesBiology030308 mycology & parasitologyGene flow[SDV] Life Sciences [q-bio]03 medical and health sciencesEvolutionary biology[SDE]Environmental Sciences[SDV.BV]Life Sciences [q-bio]/Vegetal Biology[SDV.BV] Life Sciences [q-bio]/Vegetal Biologyhuman activitiesFunction (biology)ComputingMilieux_MISCELLANEOUS030304 developmental biologyDiversity (politics)media_common
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