Search results for " Microscopy"

showing 10 items of 1617 documents

Advances in detection of fastidious bacteria: From microscopic observation to molecular biosensors

2019

Abstract Identification of pathogens and diagnosis of infections are important health challenges, especially in the case of fastidious bacteria which are those difficult-to-grow. A fastidious organism is any organism that has a complex nutritional requirement. Additionally, a fastidious microorganism will only grow when specific nutrients are included in the culture medium. These bacteria can cause serious diseases whose detection and monitoring is critical in many cases. The oldest detection methods are based on simple microscopy observation and staining, after culture on selective growth media, but often do not provide a clear answer. Some new molecular approaches, such as DNA-based seque…

Fastidious organismbiology010401 analytical chemistrybiology.organism_classification01 natural sciences0104 chemical sciencesAnalytical ChemistryMicroscopic observationMicrobiologyIdentification (biology)Simple MicroscopySpectroscopyOrganismBacteriaTrAC Trends in Analytical Chemistry
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Immunodetection of the microvillous cytoskeleton molecules villin and ezrin in the parasitophorous vacuole wall of Cryptosporidium parvum (Protozoa: …

1999

Microvilli - actin - villin - ezrin - Cryptosporidium parvum The sporozoites and merozoites of the Apicomplexan protozoan Cryptosporidium parvum (C. parvum) invade the apical side of enterocytes and induce the formation of a parasitophorous vacuole which stays in the brush border area and disturbs the distribution of microvilli. The vacuole is separated from the apical cytoplasm of the cell by an electron-dense layer of undetermined composition. In order to characterize the enterocyte cytoskeleton changes that occur during C. parvum invasion and development, we used both confocal immunofluorescence and immunoelectron microscopy to examine at the C.parvum-enterocyte interface the distributio…

Feces/microbiologyIntestines/parasitologyMicrofilament Proteins/ analysisVacuoleddc:616.07Actins/analysisRats Sprague-DawleyFecesMiceEzrinCarrier Proteins/ analysisCryptosporidium/ chemistry/pathogenicity/ultrastructureCytoskeletonMicroscopy ImmunoelectronCytoskeletonMice Inbred BALB CMicroscopy ConfocalbiologyMicrovilliMicrofilament ProteinsCytoskeleton/ chemistryGeneral MedicineCell biologyIntestinesCryptosporidium parvumFemaleVillinHistologyImmunoelectron microscopyVacuoles/ultrastructurePhosphoproteins/ analysisCryptosporidiummacromolecular substancesPathology and Forensic Medicineparasitic diseasesAnimalsApical cytoplasmActinCell Biologybiology.organism_classificationPhosphoproteinsActinsRatsMicrovilli/ chemistryCytoskeletal ProteinsMicroscopy ElectronVacuolesbiology.proteinCarrier ProteinsEuropean journal of cell biology
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Optical sectioning microscopy through single-shot Lightfield protocol

2020

Optical sectioning microscopy is usually performed by means of a scanning, multi-shot procedure in combination with non-uniform illumination. In this paper, we change the paradigm and report a method that is based in the light field concept, and that provides optical sectioning for 3D microscopy images after a single-shot capture. To do this we fi rst capture multiple orthographic perspectives of the sample by means of Fourier-domain integral microscopy (FiMic). The second stage of our protocol is the application of a novel refocusing algorithm that is able to produce optical sectioning in real time, and with no resolution worsening, in the case of sparse f luorescent samples.We provide the…

FiMicGeneral Computer ScienceOptical sectioningComputer scienceComputingMethodologies_IMAGEPROCESSINGANDCOMPUTERVISION02 engineering and technology3d microscopy01 natural sciences010309 opticsOptics0103 physical sciencesMicroscopyGeneral Materials ScienceProtocol (object-oriented programming)Fourier integral microscopebusiness.industryResolution (electron density)Orthographic projectionGeneral EngineeringSingle shotfourier lightfield microscopeGPU computingÒptica021001 nanoscience & nanotechnologySample (graphics)Microscòpialightfield microscopeoptical sectioninglcsh:Electrical engineering. Electronics. Nuclear engineering0210 nano-technologybusinesslcsh:TK1-9971
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The Lightfield Microscope Eyepiece

2021

Lightfield microscopy has raised growing interest in the last few years. Its ability to get three-dimensional information about the sample in a single shot makes it suitable for many applications in which time resolution is fundamental. In this paper we present a novel device, which is capable of converting any conventional microscope into a lightfield microscope. Based on the Fourier integral microscope concept, we designed the lightfield microscope eyepiece. This is coupled to the eyepiece port, to let the user exploit all the host microscope’s components (objective turret, illumination systems, translation stage, etc.) and get a 3D reconstruction of the sample. After the optical design, …

FiMicMicroscopeComputer scienceComputingMethodologies_IMAGEPROCESSINGANDCOMPUTERVISIONTP1-1185Translation (geometry)BiochemistryAnalytical Chemistrylaw.inventionEyepieceOpticslawlightfield eyepieceMicroscopyplenoptic eyepieceElectrical and Electronic EngineeringInstrumentationLightingFourier integral microscopeMicroscopylightfield microscopybusiness.industryCommunicationChemical technology3D reconstructionSingle shotTime resolutionSample (graphics)Atomic and Molecular Physics and OpticsÒptica Aparells i instrumentsMicroscòpia3D microscopybusinessSensors
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PLLA/Fibrin Tubular Scaffold: A New Way for Reliable Endothelial Cell Seeding

2014

In the present work a simple and quick technique for cell seeding into tubular-shaped scaffolds, which allows a homogeneous cell distribution, was tested. The poly-L-lactide (PLLA) scaffolds, prepared via diffusion induced phase separation (DIPS), were filled with fibrin gel in order to obtain a hybrid scaffold for Vascular Tissue Engineering applications. The formation of immobilized fibrin networks on the inner surface of the tubular scaffolds was observed using confocal microscopy and SEM. Morphological analysis of the so-obtained scaffold revealed that the fibrin gel is uniformly distributed on the internal surface of the scaffold, leading to an organized structure. Moreover a penetrati…

FibrinScaffoldMaterials sciencebiologyCell growthGeneral MedicinePenetration (firestop)Fibrinlaw.inventionEndothelial stem cellPhase SeparationTubular scaffoldConfocal microscopylawbiology.proteinSeedingVascular Tissue EngineeringBiomedical engineeringConference Papers in Science
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In situ monitoring of moisture uptake of flax fiber reinforced composites under humid/dry conditions

2021

The use of green materials such as natural fiber-reinforced composites represents an increasingly stringent prerogative in the future planning of industrial and non-industrial production. The optimization of these materials is the main aim of the current research, focused on the evaluation of the behavior of flax fiber reinforced composites exposed to isothermal adsorption and desorption cycles, at varying the partial pressure of water vapor (P/P0). For this purpose, the moisture uptake and the morphology changes of the composite material and their constituents were in situ monitored through a measurement protocol, by using a dynamic vapor sorption (DVS) analysis, coupled with an environmen…

Flax fiberIn situadsorption; composites; fibers; microscopyAdsorptionMaterials scienceSettore ING-IND/22 - Scienza E Tecnologia Dei MaterialiPolymers and PlasticsMoistureMaterials ChemistryGeneral ChemistryComposite materialAdsorption composites fibers microscopySurfaces Coatings and Films
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Advanced fluorescence microscopy for in vivo imaging of neuronal activity

2019

Brain function emerges from the coordinated activity, over time, of large neuronal populations placed in different brain regions. Understanding the relationships of these specific areas and disentangling the contributions of individual neurons to overall function remain central goals for neuroscience. In this scenario, fluorescence microscopy has been proved as the tool of choice for in vivo recording of brain activity. Optical advances combined with genetically encoded indicators allow a large flexibility in terms of spatiotemporal resolution and field of view while keeping invasiveness in living animals to a minimum. Here we describe the latest advancements in the field of linear and nonl…

Flexibility (engineering)0303 health sciencesBrain activity and meditationComputer science01 natural sciencesAtomic and Molecular Physics and OpticsElectronic Optical and Magnetic Materials010309 optics03 medical and health scienceslight-sheet microscopy; field-of-view; cellular-resolution; adaptive optics; multiphoton microscopy; GRID CELLS; HIGH-SPEED; LONG-TERM; 2-PHOTON; DEEPLight sheet fluorescence microscopy0103 physical sciencesFluorescence microscopePremovement neuronal activityIn vivo microscopyOptics In vivo imaging MicroscopyNeurosciencePreclinical imagingBrain function030304 developmental biologyOptica
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Probing ensemble polymorphism and single aggregate structural heterogeneity in insulin amyloid self-assembly.

2020

Ensembles of protein aggregates are characterized by a nano- and micro-scale heterogeneity of the species. This diversity translates into a variety of effects that protein aggregates may have in biological systems, both in connection to neurodegenerative diseases and immunogenic risk of protein drug products. Moreover, this naturally occurring variety offers unique opportunities in the field of protein-based biomaterials. In the above-mentioned fields, the isolation and structural analysis of the different amyloid types within the same ensemble remain a priority, still representing a significant experimental challenge. Here we address such complexity in the case of insulin for its relevance…

Fluorescence-lifetime imaging microscopyAmyloidFIBRIL POLYMORPHISMPHASOR APPROACHSURFACESpheruliteProtein ConformationSurface Propertiesmedicine.medical_treatmentBETATHIOFLAVIN-T FLUORESCENCE02 engineering and technologyMicro-FTIRProtein aggregation010402 general chemistryFibril01 natural sciencesFluorescence lifetime imagingBiomaterialsProtein AggregatesColloid and Surface ChemistryBINDINGHuman insulinmedicineInsulinParticle SizeSECONDARY STRUCTURESPHERULITESChemistryInsulinAmyloidosisOptical ImagingMICROSCOPY021001 nanoscience & nanotechnologymedicine.disease0104 chemical sciencesSurfaces Coatings and FilmsElectronic Optical and Magnetic MaterialsBiopharmaceuticalMicroscopy FluorescenceAmyloid structureVisible and subvisible particlesBiophysicsThioflavin TSelf-assemblyHeterogeneity0210 nano-technologyInfrared microscopyPROTEIN AGGREGATIONJournal of colloid and interface science
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Phasor-FLIM analysis of Thioflavin T self-quenching in Concanavalin amyloid fibrils

2020

The formation of amyloid structures has traditionally been related to human neurodegenerative pathologies and, in recent years, the interest in these highly stable nanostructures was extended to biomaterial sciences. A common method to monitor amyloid growth is the analysis of Thioflavin T fluorescence. The use of this highly selective dye, diffused worldwide, allows mechanistic studies of supramolecular assemblies also giving back important insight on the structure of these aggregates. Here we present experimental evidence of self-quenching effect of Thioflavin T in presence of amyloid fibrils. A significant reduction of fluorescence lifetime of this dye which is not related to the propert…

Fluorescence-lifetime imaging microscopyAmyloidFLIMHistologyAmyloid02 engineering and technologyProtein aggregationprotein aggregation03 medical and health scienceschemistry.chemical_compound0302 clinical medicineself-quenchingmental disordersamyloid fibrilConcanavalin Afluorescence lifetimeHumansBenzothiazolesInstrumentationFluorescent DyesInclusion BodiesQuenching (fluorescence)biologyStaining and LabelingChemistryOptical ImagingPhasorNeurodegenerative Diseases030206 dentistry021001 nanoscience & nanotechnologyFluorescenceSettore FIS/07 - Fisica Applicata(Beni Culturali Ambientali Biol.e Medicin)Medical Laboratory TechnologyMicroscopy FluorescenceConcanavalin APhasorbiology.proteinBiophysicsThioflavin TThioflavinamyloid fibrils Concanavalin A FLIM fluorescence lifetime Phasor protein aggregation self-quenching Thioflavin TAnatomy0210 nano-technology
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Evaluation of near-Infrared fluorescence-conjugated peptides for visualization of human epidermal receptor 2-overexpressed gastric cancer.

2021

338 Background: HER2 is highly overexpressed in many kinds of cancers with a poor prognosis. Recently, near-infrared (NIR) fluorescence-based imaging is a growing field for both pre-clinical and clinical application. In this study, we aimed to synthesize Human Epidermal Receptor2 (HER2)-specific near-infrared (NIR) fluorescence probes and evaluate their applicability in cancer-specific image-guided surgeries using an animal model. Methods: An NIR dye emitting light of 800 nm (IRDye800CW, Li-COR, USA) was conjugated to trastuzumab and HER2-specific affibody using click mechanism. HER2 affinity was assessed by the surface plasmon resonance technique. HER2 positive/negative gastric cancer cel…

Fluorescence-lifetime imaging microscopyBiodistributionCancer Researchbusiness.industryStomach neoplasmsGastroenterologyCancerSpleenmedicine.diseaseMolecular biologyFluorescenceFluorescencemedicine.anatomical_structureImage-guided surgeryOncologyGastrectomymedicineOriginal ArticleSurgerySurface plasmon resonanceReceptorbusinessskin and connective tissue diseasesneoplasmsJournal of Clinical Oncology
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