Search results for "2-Dipalmitoylphosphatidylcholine"

showing 10 items of 18 documents

Intramolecular structural parameters are key modulators of the gel-liquid transition in coarse grained simulations of DPPC and DOPC lipid bilayers

2018

The capability of coarse-grained models based on the MARTINI mapping to reproduce the gel-liquid phase transition in saturated and unsaturated model lipids was investigated. We found that the model is able to reproduce a lower critical temperature for 1,2-dioleoyl-sn-glycero-3-phosphocholine (DOPC) with respect to 1,2-dipalmitoyl-sn-glycero-3-phosphocholine (DPPC). Nonetheless, the appearance of a gel phase for DOPC is strictly dependent on the intramolecular parameters chosen to model its molecular structure. In particular, we show that the bending angle at the coarse-grained bead corresponding to the unsaturated carbon-carbon bond acts as an order parameter determining the temperature of …

0301 basic medicinePhase transitionMolecular dynamic12-DipalmitoylphosphatidylcholineLipid BilayersMolecular ConformationBiophysicsBendingMolecular Dynamics SimulationMolecular dynamics01 natural sciencesBiochemistry03 medical and health sciencesMolecular dynamicsPhase (matter)BiomembranesBiomembrane0103 physical sciencesMoleculeLipid bilayerMolecular BiologyMulti-scalePhase transitionMARTINI010304 chemical physicsChemistryTransition temperatureTemperatureCell BiologyCrystallography030104 developmental biologyChemical physicsIntramolecular forcePhosphatidylcholinesBiomembranes; MARTINI; Molecular dynamics; Multi-scale; Phase transition; Biophysics; Biochemistry; Molecular Biology; Cell Biology
researchProduct

Spontaneous domain formation of phospholipase A2 at interfaces: fluorescence microscopy of the interaction of phospholipase A2 with mixed monolayers …

1992

Abstract Fluorescence microscopy has recently been proven to be an ideal tool to investigated the specific interaction of phospholipase A 2 with oriented substrate monolayers. Using a dual labeling technique, it could be shown that phospholipase A 2 can specifically attack and hydrolyze solid analogous l -α-DPPC domains. After a critical extent of monolayer hydrolysis the enzyme itself starts to aggregate forming regular shaped protein domains (Grainger et al. (1990) Biochim. Biophys. Acta 1023. 365–379). In order to confirm that the existence of hydrolysis products in the mononlayer is necessary for the observed aggregation of phospholipase A 2 , mixed monolayers of d - and l -α-DPPC, l -α…

12-DipalmitoylphosphatidylcholineCarboxylic acidProtein domainBiophysicsPhospholipidBiochemistryPhospholipases Achemistry.chemical_compoundPhospholipase A2MonolayerOrganic chemistryColoring Agentschemistry.chemical_classificationElapid VenomsPhospholipase AbiologyRhodaminesHydrolysisFatty AcidsSubstrate (chemistry)LysophosphatidylcholinesCell BiologyFluoresceinsEnzyme bindingPhospholipases A2chemistryMicroscopy Fluorescencebiology.proteinBiophysicsPhosphatidylcholinesFluoresceinDecanoic AcidsBiochimica et biophysica acta
researchProduct

Stability of Asymmetric Lipid Bilayers Assessed by Molecular Dynamics Simulations

2009

The asymmetric insertion of amphiphiles into biological membranes compromises the balance between the inner and outer monolayers. As a result, area expansion of the receiving leaflet and curvature strain may lead to membrane permeation, shape changes, or membrane fusion events. We have conducted both atomistic and coarse-grained molecular dynamics simulations of dipalmitoyl-phosphatidylcholine (DPPC) bilayers to study the effect of an asymmetric distribution of lipids between the two monolayers on membrane stability. Highly asymmetric lipid bilayers were found to be surprisingly stable within the submicrosecond time span of the simulations. Even the limiting case of a monolayer immersed in …

12-DipalmitoylphosphatidylcholineLipid BilayersBiochemistryCatalysisColloid and Surface ChemistryCOARSE-GRAINED MODELSHAPE TRANSFORMATIONSMonolayerComputer SimulationLipid bilayer phase behaviorLipid bilayerChemistryBilayerLipid bilayer fusionBiological membraneGeneral ChemistryLipid bilayer mechanicsANTIMICROBIAL PEPTIDESCrystallographyMembraneTRANSMEMBRANE DISTRIBUTIONEGG PHOSPHATIDYLCHOLINEPhosphatidylcholinesPORE FORMATIONBiophysicsPRESSURE PROFILESMECHANOSENSITIVE CHANNELlipids (amino acids peptides and proteins)OCTYL GLUCOSIDEPHOSPHOLIPID-BILAYERSJournal of the American Chemical Society
researchProduct

AFM study of interaction forces in supported planar DPPC bilayers in the presence of general anesthetic halothane

2006

International audience; In spite of numerous investigations, the molecular mechanism of general anesthetics action is still not well understood. It has been shown that the anesthetic potency is related to the ability of an anesthetic to partition into the membrane. We have investigated changes in structure, dynamics and forces of interaction in supported dipalmitoylphosphatidylcholine (DPPC) bilayers in the presence of the general anesthetic halothane. In the present study, we measured the forces of interaction between the probe and the bilayer using an atomic force microscope. The changes in force curves as a function of anesthetic incorporation were analyzed. Force measurements were in go…

12-DipalmitoylphosphatidylcholineMicrodomainsKineticsLipid BilayersBiophysics02 engineering and technology010402 general chemistryMicroscopy Atomic Force01 natural sciencesBiochemistrychemistry.chemical_compoundPlanar bilayermedicineLipid bilayerChemistryBilayerForce spectroscopyCell Biology021001 nanoscience & nanotechnologyForce spectroscopy0104 chemical sciencesCrystallographyKineticsMembrane[ PHYS.PHYS.PHYS-AO-PH ] Physics [physics]/Physics [physics]/Atmospheric and Oceanic Physics [physics.ao-ph]Chemical physicsDipalmitoylphosphatidylcholineAnestheticAnesthetics InhalationHalothane0210 nano-technologyHalothanemedicine.drugBiochimica et Biophysica Acta (BBA) - Biomembranes
researchProduct

Direct Observation of Nanometer-Scale Pores of Melittin in Supported Lipid Monolayers

2015

Melittin is the most studied membrane-active peptide and archetype within a large and diverse group of pore formers. However, the molecular characteristics of melittin pores remain largely unknown. Herein, we show by atomic force microscopy (AFM) that lipid monolayers in the presence of melittin are decorated with numerous regularly shaped circular pores that can be distinguished from nonspecific monolayer defects. The specificity of these pores is reinforced through a statistical evaluation of depressions found in Langmuir-Blodgett monolayers in the presence and absence of melittin, which eventually allows characterization of the melittin-induced pores at a quantitative low-resolution leve…

12-DipalmitoylphosphatidylcholineMolecular Sequence DataPeptideMicroscopy Atomic Forcecomplex mixturesMelittinchemistry.chemical_compoundMicroscopyMonolayerPressureElectrochemistryNanotechnologyMoleculeGeneral Materials ScienceAmino Acid SequencePorositySpectroscopychemistry.chemical_classificationChemistryResolution (electron density)technology industry and agricultureSurfaces and InterfacesCondensed Matter PhysicsLipidsMelittenCrystallographylipids (amino acids peptides and proteins)NanometrePorosityLangmuir
researchProduct

Parvovirus capsid disorders cholesterol-rich membranes.

2008

In this study canine parvovirus, CPV, was found to induce disorder in DPPC:cholesterol membranes in acidic conditions. This acidicity-induced fluidizing effect is suggested to originate from the N-terminus of the viral capsid protein VP1. In accordance with the model membrane studies, a fluidizing effect was seen also in the endosomal membranes during CPV infection implying an important functional role of the fluidization in the endocytic entry of the virus.

12-DipalmitoylphosphatidylcholineParvovirus CanineEndosomeMembrane Fluidityanimal diseasesvirusesEndocytic cycleBiophysicsBiochemistryViruschemistry.chemical_compoundCapsidMolecular BiologybiologyCholesterolParvovirusCanine parvovirusMembranes ArtificialCell BiologyHydrogen-Ion Concentrationbiology.organism_classificationVirologyCell biologyMembraneCholesterolCapsidchemistryCapsid ProteinsBiochemical and biophysical research communications
researchProduct

Partition of Indicaxanthin in Membrane Biomimetic Systems. A Kinetic and Modeling Approach

2009

The solubilization site of indicaxanthin (Ind) in lipid bilayers was investigated by the kinetics of Ind oxidation by peroxyl radicals in water and in aqueous/L-alpha-dipalmitoyl-phosphatidylcholine (DPPC) vesicles, pH 7.4, and 37.0 and 48.0 degrees C, that is, in a gel-like and a crystal liquidlike bilayer state, respectively. The time-dependent Ind absorbance decay, matched with a successful simulation of the reaction kinetic mechanism by Gepasi software, supported a multistep pathway. Computer-assisted analysis allowed calculation of the rate constants associated with the reactions involved, the values of which decreased with increasing DPPC concentration. The binding constant calculated…

12-DipalmitoylphosphatidylcholinePyridinesLipid BilayersBetalain pigmentchemistry.chemical_compoundReaction rate constantGepasi simulation.biomimetic membraneLipid bilayervesiclephospholipidAqueous solutionChromatographyVesicleBilayerAqueous two-phase systemWaterGeneral ChemistryBinding constantBetaxanthinsPeroxidesKineticschemistryLiposomesPhysical chemistryDPPCGeneral Agricultural and Biological SciencesOxidation-ReductionIndicaxanthinSoftware
researchProduct

The influence of tin compounds on the dynamic properties of liposome membranes: A study using the ESR method

2005

AbstractThe influence of organic and inorganic compounds of tin on the dynamic properties of liposome membranes obtained in the process of dipalmitoylphosphatidylcholine (DPPC) sonication in distilled water was investigated. This was carried out by means of the spin ESR probe method. The probes were selected in such a way as to penetrate different areas of the membrane (a TEMPO probe, 5-DOXYL stearic acid, 16-DOXYL stearic acid). Four compounds of tin were chosen: three organic ones, (CH3)4Sn, (C2H5)4Sn and (C3H7)3SnCl, and one inorganic one, SnCl2. The investigated compounds were added to a liposome dispersion, which was prepared prior to that. The concentration of the admixture was change…

12-DipalmitoylphosphatidylcholineShort CommunicationSonicationTin compoundsInorganic chemistrychemistry.chemical_elementDPPC liposomesBiochemistrychemistry.chemical_compoundOrganometallic CompoundsMolecular BiologyESRchemistry.chemical_classificationLiposomeElectron Spin Resonance SpectroscopyMembranes ArtificialCell Biologyequipment and suppliesMembraneHydrocarbonchemistryBiochemistryDistilled waterMolecular ProbesDipalmitoylphosphatidylcholineLiposomesSpin LabelsStearic acidTinCellular and Molecular Biology Letters
researchProduct

Acyl-Chain Mismatch Driven Superlattice Arrangements in DPPC/DLPC/Cholesterol Bilayers

2010

Fluorescence and infrared spectroscopy and cholesterol oxidase activity were employed to investigate the effect of phosphatidylcholine (PC) acyl chain length mismatch on the lateral organizations of lipids in liquid-ordered dipalmitoyl-PC/dilauroyl-PC/cholesterol (DPPC/DLPC/CHOL) bilayers. Plots of steady-state fluorescence emission anisotropy of diphenylhexatriene (DPH) labeled PC (DPH-PC) embedded in the DPPC/DLPC/CHOL bilayers revealed significant peaks at several DPPC mole fractions (Y(DPPC)) when the cholesterol mole fraction (X(CHOL)) was fixed to particular values. Analogously, the DPH-PC anisotropy peaked at several critical X(CHOL)'s when Y(DPPC) was fixed. Acyl chain C-H and C hor…

Diphenylhexatriene12-DipalmitoylphosphatidylcholineCholesterol oxidaseSuperlatticeLipid BilayersAnalytical chemistryInfrared spectroscopyFluorescence Polarization010402 general chemistryMole fraction01 natural sciencesArticle03 medical and health scienceschemistry.chemical_compoundPhosphatidylcholineSpectroscopy Fourier Transform Infraredpolycyclic compoundsMaterials ChemistryPhysical and Theoretical ChemistryLipid bilayer030304 developmental biology0303 health sciencesCholesterol OxidaseCholesteroltechnology industry and agriculture0104 chemical sciencesSurfaces Coatings and FilmsCrystallographyCholesterolchemistryCholesterol oxidase activity13. Climate actionAcyl chainPhosphatidylcholineslipids (amino acids peptides and proteins)Fluorescence anisotropyThe Journal of Physical Chemistry B
researchProduct

Kinetics of the lipoperoxyl radical-scavenging activity of indicaxanthin in solution and unilamellar liposomes

2007

Abstract The reaction of the phytochemical indicaxanthin with lipoperoxyl radicals generated in methyl linoleate methanol solution by 2,20-azobis(2,4-dimethylvaleronitrile), and in aqueous soybean phosphatidylcholine unilamellar liposomes by 2,20-azobis(2- amidinopropane)hydrochloride, was studied. The molecule acts as a chain-terminating lipoperoxyl radical scavenger in solution, with a calculated inhibition constant of 3.63 £ 105M21 s21, and a stoichiometric factor approaching 2. Indicaxanthin incorporated in liposomes prevented lipid oxidation, inducing clear-cut lag periods and decrease of the propagation rate. Both effects were concentration-dependent, but not linearly related to the p…

Indicaxanthin membranes radical scavenger liposomesLipid PeroxidesAntioxidant12-DipalmitoylphosphatidylcholinePyridinesmedicine.medical_treatmentRadicalLipid Bilayersalpha-TocopherolAmidinesContext (language use)In Vitro TechniquesBiochemistryAntioxidantsLipid peroxidationchemistry.chemical_compoundLipid oxidationSuspensionsPhosphatidylcholineNitrilesmedicineOrganic chemistryLiposomeDose-Response Relationship DrugMolecular StructureMethanolDrug SynergismGeneral MedicineFree Radical ScavengersBetaxanthinsSolutionsKineticschemistryLinoleic AcidsLiposomesPhosphatidylcholinesSolventsLipid PeroxidationIndicaxanthinAzo CompoundsOxidation-ReductionNuclear chemistry
researchProduct