Search results for "Electrophoresi"

showing 10 items of 1009 documents

NovelAmycolatopsis balhimycinabiochemical abilities unveiled by proteomics

2014

Amycolatopsis balhimycina DSM5908 is an actinomycete producer of balhimycin, an analogue of vancomycin, the antibiotic of ‘last resort’ against multidrug-resistant Gram-positive pathogens. Most knowledge on glycopeptide biosynthetic pathways comes from studies on A. balhimycina as this strain, among glycopeptide producers, is genetically more amenable. The recent availability of its genome sequence allowed to perform differential proteomic analyses elucidating key metabolic pathways leading to antibiotic production in different growth conditions. To implement proteomic data on A. balhimycina derived from 2-DE approaches and to identify novel components, a combined approach based on protein …

Whole genome sequencingchemistry.chemical_classificationSpectrometry Mass Electrospray Ionizationmass spectrometry; 1D-electrophoresis; glycopeptide antibiotics; actinomycetes; glutamate dehydrogenaseProteomeBiologyProteomicsMicrobiologyGenomeActinomycetes proteomics 2D-DIGE Mass spectrometryGlycopeptideSynthetic biologyMetabolic pathwayEnzymeBiochemistrychemistryBacterial ProteinsTandem Mass SpectrometryProtein purificationActinomycetalesGeneticsElectrophoresis Polyacrylamide GelMolecular BiologyMetabolic Networks and Pathways
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Actin in Allomyces arbuscula

1991

International audience; A 42 kDa protein was isolated by affinity chromatography on DNAse I-Sepharose from 24-h-old mycelia of Allomyces arbuscula. It was identified as actin by immunoblots with monoclonal antibody probe against a chicken gizzard actin. This fungal actin has a pI of 5.9 and separates into two spots on two-dimensional polyacrylamide gel electrophoresis, suggesting its dual nature. It can polymerize into 8-10 nm filaments visualized by electron microscopy.

[SDE] Environmental Sciencesmedicine.drug_classAllomyces[SDV]Life Sciences [q-bio]Plant Sciencemacromolecular substancesMonoclonal antibodylaw.invention03 medical and health sciencesAffinity chromatographylawGeneticsmedicine[SDV.BV]Life Sciences [q-bio]/Vegetal Biology[SDV.BV] Life Sciences [q-bio]/Vegetal BiologyPolyacrylamide gel electrophoresisEcology Evolution Behavior and SystematicsActin030304 developmental biologyGel electrophoresis0303 health sciencesbiology030306 microbiologybiology.organism_classificationMolecular biologyActina[SDV] Life Sciences [q-bio]Biochemistry[SDE]Environmental SciencesElectron microscopeBiotechnology
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High-throughput sequencing of amplicons for monitoring yeast biodiversity in must and during alcoholic fermentation

2014

Abstract We compared pyrosequencing technology with the PCR-ITS-RFLP analysis of yeast isolates and denaturing gradient gel electrophoresis (DGGE). These methods gave divergent findings for the yeast population. DGGE was unsuitable for the quantification of biodiversity and its use for species detection was limited by the initial abundance of each species. The isolates identified by PCR-ITS-RFLP were not fully representative of the true population. For population dynamics, high-throughput sequencing technology yielded results differing in some respects from those obtained with other approaches. This study demonstrates that 454 pyrosequencing of amplicons is more relevant than other methods …

[SDV]Life Sciences [q-bio]PopulationBioengineeringBiologyEthanol fermentationPolymerase Chain ReactionApplied Microbiology and BiotechnologyDNA sequencing03 medical and health sciencesYeasts[SDV.IDA]Life Sciences [q-bio]/Food engineering[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyVitis[SPI.GPROC]Engineering Sciences [physics]/Chemical and Process Engineeringeducation030304 developmental biologyGenetics0303 health scienceseducation.field_of_studyEthanolDenaturing Gradient Gel Electrophoresis030306 microbiologybusiness.industryHigh-Throughput Nucleotide Sequencingfood and beveragesBiodiversityYeastBiotechnologyDNA profilingFermentation[SDE]Environmental SciencesPyrosequencingFermentationbusinessTemperature gradient gel electrophoresisBiotechnology
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Biochemical and structural features of a novel cyclodextrinase from cow rumen metagenome.

2007

A novel enzyme, RA.04, belonging to the alpha-amylase family was obtained after expression of metagenomic DNA from rumen fluid (Ferrer et al.: Environ. Microbiol. 2005, 7, 1996-2010). The purified RA.04 has a tetrameric structure (280 kDa) and exhibited maximum activity (5000 U/mg protein) at 70 degrees C and was active within an unusually broad pH range from 5.5 to 9.0. It maintained 80% activity at pH 5.0 and 9.5 and 75 degrees C. The enzyme hydrolyzed alpha-D-(1,4) bonds 13-fold faster than alpha-D-(1,6) bonds to yield maltose and glucose as the main products, and it exhibited transglycosylation activity. Its preferred substrates, in the descending order, were maltooligosaccharides (C3-C…

alpha-CyclodextrinsRumenGlycoside HydrolasesStarchAmylopectinOligosaccharidesApplied Microbiology and BiotechnologyCatalysisSubstrate Specificitychemistry.chemical_compoundBacterial ProteinsAmyloseCyclomaltodextrinaseAnimalsMaltoseGlucansChromatography High Pressure Liquidchemistry.chemical_classificationBinding Sitesbiologybeta-CyclodextrinsTemperatureActive sitePullulanStarchGeneral MedicineMaltoseHydrogen-Ion ConcentrationEnzymechemistryBiochemistryAmylopectinbiology.proteinMolecular MedicineCattleElectrophoresis Polyacrylamide GelAmylosegamma-CyclodextrinsBiotechnology journal
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Enantiodifferentiation of N-benzyloxycarbonylaminophosphonic and phosphinic acids and their esters using cyclodextrins by means of capillary electrop…

2005

Capillary electrophoresis was successfully applied for separation of the enantiomers of N-benzyloxycarbonyl-alpha-aminophosphonic and alpha-aminophosphinic acids as well as their ethyl and phenyl monoesters with the use of a range of commercially available cyclodextrins (alpha, beta and hydroxypropyl-gamma-cyclodextrins) as chiral selectors. The dependence of effectiveness of separation on type and concentration of these chiral selectors as well as on pH of background electrolyte was examined in some detail.

aminophosphinatesaminophosphonatesOrganophosphonatescapillary electrophoresisElectrolyteBiochemistryAnalytical ChemistryInclusion compoundchemistry.chemical_compoundCapillary electrophoresisOrganic chemistrychemistry.chemical_classificationChromatographycyclodextrinsMolecular StructureCyclodextrinChemistryOrganic ChemistryenantiodiscriminationElectrophoresis CapillaryReproducibility of ResultsEstersStereoisomerismGeneral MedicineHydrogen-Ion ConcentrationPhosphinic AcidsPhosphinic AcidsPhase compositionEnantiomerJournal of Chromatography A
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Separation of aminoalkanephosphonic acid enantiomers by indirect UV detection capillary electrophoresis with application of cyclodextrins.

2003

Indirect UV detection capillary electrophoresis (CE) was used for the separation of aminoalkanephosphonic acid (AP) enantiomers by applying commercially available cyclodextrins as chiral discriminators. The results show that the separation of the enantiomers depends on pH of the background electrolyte, the molar ratio of cyclodextrin to aminophosphonic acid, and on the type of the applied chiral selector. Optimization of process conditions allowed enantiomeric baseline separation or partial separation of 12 out of 14 alpha-aminophosphonic acids studied. This type of CE might therefore be successfully used for routine determination of enantiomeric purity of aminophosphonic acids.

aminophosphonic acidsClinical Biochemistrycapillary electrophoresisOrganophosphonatesElectrolyteBiochemistryindirect UV detectionAnalytical ChemistryCapillary electrophoresisMolar ratiopolycyclic compoundsheterocyclic compoundsAmineschemistry.chemical_classificationCyclodextrinsChromatographyCyclodextrinorganic chemicalsElectrophoresis CapillaryStereoisomerismHydrogen-Ion ConcentrationProcess conditionschemistrycyclodextrinUv detectionEnantiomerenantiomer separationElectrophoresis
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Analyse de la variabilité génétique mitochondriale et chloroplastique de deux espèces du genre Lupinus (L.Albus et L. Mutabilis)

1988

Notice présente dans BelInra (https://belinra.inra.fr/gestion/catalog.php?categ=isbd&id=90015); il s'agit d'un type de produit dont les métadonnées ne correspondent pas aux métadonnées attendues dans les autres types de produit : DISSERTATION; Analyse de la variabilité génétique mitochondriale et chloroplastique de deux espèces du genre Lupinus (L.Albus et L. Mutabilis)

amélioration génétiquechloroplaste adn[ SDV.BV ] Life Sciences [q-bio]/Vegetal Biologypurificationrefininglupinus mutabilissolvent free microwave extraction (sfem)méthode d'analysetarwiplante fourragèrelupinus albusplasmidelectrophoresisplasmideextraction[SDV.BV]Life Sciences [q-bio]/Vegetal Biology[SDV.BV] Life Sciences [q-bio]/Vegetal BiologyélectrophorèseADN mitochondrial
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Sea Urchin Mitochondrial Matrix Contains a 56-kDa Chaperonine-like Protein

1997

Abstract Paracentrotus lividus mitochondrial matrix contains a constitutive hsp of 56-KDa which cross reacts with a serum anti-hsp-60 chaperonine from yeast mitochondria. The localization of hsps preexisting or newly synthesized in different subcellular fractions of gastrula embryos is also analyzed by two-dimensional electrophoresis.

animal structuresChaperoninsBlotting WesternBiophysicsMitochondrionBiochemistryParacentrotus lividusbiology.animalAnimalsElectrophoresis Gel Two-DimensionalImmunoelectrophoresisMolecular BiologySea urchinbiologyEmbryoCell Biologybiology.organism_classificationMolecular biologyYeastMitochondriaGastrulationBiochemistryMitochondrial matrixSea Urchinsbiological sciencesembryonic structuresBiochemical and Biophysical Research Communications
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Sea urchin deciliation induces thermoresistance and activates the p38 mitogen-activated protein kinase pathway.

2003

In this study, we demonstrate by a variety of approaches (ie, morphological analysis, Western blots, immunolocalization, and the use of specific antibodies) that hyperosmotic deciliation stress of sea urchin embryos induces a thermotolerant response. Deciliation is also able to activate a phosphorylation signaling cascade the effector of which might be the p38 stress-activated protein kinase because we found that the administration of the p38 inhibitor SB203580 to sea urchin deciliated gastrula embryos makes the hyperosmotic deciliation stress lethal.

animal structuresHot TemperaturePyridinesp38 mitogen-activated protein kinasesSEA URCHIN DECILIATION p38MAP KINASEBiochemistryp38 Mitogen-Activated Protein KinasesEnzyme activatorStress Physiologicalbiology.animalAnimalsCiliaSettore BIO/06 - Anatomia Comparata E CitologiaPhosphorylationProtein kinase ASea urchinbiologyEffectorImidazolesAntibodies MonoclonalCell BiologyGastrulaOriginal ArticlesMolecular biologyBlotEnzyme ActivationSea Urchinsembryonic structuresPhosphorylationElectrophoresis Polyacrylamide GelSignal transductionMitogen-Activated Protein KinasesSignal TransductionCell stresschaperones
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Achievement of thermotolerance through hsps phosphorylation in sea urchin embryos.

1995

TPA treatment of sea urchin embryos is able to induce thermotolerance. Evidence is provided that TPA treatment induces phosphorylation of a constitutive stress protein of 38 KDa.

animal structuresHot Temperatureintegumentary systemTrough (geology)Cell BiologyGeneral MedicineSea urchin embryoBiologyCell biologySea Urchinsembryonic structuresBotanyPhosphorylationAnimalsTetradecanoylphorbol AcetateElectrophoresis Gel Two-DimensionalFemalePhosphorylationHeat-Shock ProteinsBody Temperature RegulationCell biology international
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