Search results for "Vesicular Stomatitis"

showing 10 items of 46 documents

Experimental evolution of an oncolytic vesicular stomatitis virus with increased selectivity for p53-deficient cells

2014

Experimental evolution has been used for various biotechnological applications including protein and microbial cell engineering, but less commonly in the field of oncolytic virotherapy. Here, we sought to adapt a rapidly evolving RNA virus to cells deficient for the tumor suppressor gene p53, a hallmark of cancer cells. To achieve this goal, we established four independent evolution lines of the vesicular stomatitis virus (VSV) in p53-knockout mouse embryonic fibroblasts (p53-/- MEFs) under conditions favoring the action of natural selection. We found that some evolved viruses showed increased fitness and cytotoxicity in p53-/- cells but not in isogenic p53+/+ cells, indicating gene-specifi…

Cancer TreatmentVirus OncolíticosProtein EngineeringMiceMedicine and Health SciencesMacromolecular EngineeringMice KnockoutOncolytic VirotherapyMultidisciplinaryQProteína p53 Supresora de TumorRNeoplasias de la Mama3. Good healthOncolytic VirusesOncologyVesicular stomatitis virusColonic NeoplasmsMedicineFemaleVesicular StomatitisResearch ArticleBiotechnologyDirected EvolutionEvolutionary ProcessesTumor suppressor geneScienceBioengineeringBreast NeoplasmsBiologyMicrobiologyViral EvolutionVirusVesicular StomatitisVirologyCell Line TumorGeneticsAnimalsHumansEvolutionary BiologyNeoplasias del ColonBiology and Life SciencesRNA virusVesiculovirusbiology.organism_classificationVirologyOrganismal EvolutionOncolytic virusAnimal Models of InfectionArtificial SelectionSynthetic BioengineeringViruses and CancerCell cultureMicrobial EvolutionCancer cellCancer researchDirected Molecular EvolutionTumor Suppressor Protein p53
researchProduct

Evolution of RNA virus in spatially structured heterogeneous environments

2003

A hallmark of the infectious cycle for many RNA viruses parasitizing multicellular hosts is the need to invade and successfully replicate in tissues that comprise a variety of cell types. Thus, multicellular hosts represent a heterogeneous environment to evolving viral populations. To understand viral adaptation to multicellular hosts, we took a double approach. First, we developed a mathematical model that served to make predictions concerning the dynamics of viral populations evolving in heterogeneous environments. Second, the predictions were tested by evolving vesicular stomatitis virus in vitro on a spatially structured environment formed by three different cell types. In the absence o…

Cell typeeducation.field_of_studyPopulation DynamicsPopulationAdaptation BiologicalRNARNA virusEnvironmentIn Vitro TechniquesModels TheoreticalBiologybiology.organism_classificationBiological EvolutionVirologyMulticellular organismEvolutionary biologyVesicular stomatitis virusViral evolutionRNA VirusesAdaptationeducationEcology Evolution Behavior and SystematicsJournal of Evolutionary Biology
researchProduct

Collective Viral Spread Mediated by Virion Aggregates Promotes the Evolution of Defective Interfering Particles

2020

Recent insights have revealed that viruses use a highly diverse set of strategies to release multiple viral genomes into the same target cells, allowing the emergence of beneficial, but also detrimental, interactions among viruses inside infected cells. This has prompted interest among microbial ecologists and evolutionary biologists in studying how collective dispersal impacts the outcome of viral infections. Here, we have used vesicular stomatitis virus as a model system to study the evolutionary implications of collective dissemination mediated by viral aggregates, since this virus can spontaneously aggregate in the presence of saliva. We find that saliva-driven aggregation has a dual ef…

Cell typevirusesGene ExpressionEcological and Evolutionary ScienceGenome ViralBiologyVirus ReplicationMicrobiologyDeep sequencingVirusCell Linedefective interfering particles03 medical and health sciencesMultiplicity of infectionGenes ReporterVirologyAnimalsHumansexperimental evolutioncollective infectious unitssocial evolution030304 developmental biologyInfectivity0303 health sciencesExperimental evolution030306 microbiologyVirionDefective VirusesVesiculovirusbiology.organism_classificationBiological EvolutionVirologyQR1-5023. Good healthVirus DiseasesVesicular stomatitis virusBiological dispersalGenetic Fitnessvesicular stomatitis virusResearch ArticlemBio
researchProduct

Molecular Characterization of Virus-induced Autoantibody Responses

2004

Here we present a comprehensive molecular mapping of virus-induced autoimmune B cell responses obtained by serological identification of antigens by recombinant expression cloning analysis. Immunoscreening of cDNA expression libraries of various organs (lung, liver, and spleen) using sera from mice infected with cytopathic (vaccinia virus [VV]) or noncytopathic (lymphocytic choriomeningitis virus [LCMV]) viruses revealed a broad specificity of the elicited autoantibody response. Interestingly, the majority of the identified autoantigens have been previously described as autoantigens in humans. We found that induction of virus-induced autoantibodies of the immunoglobulin G class largely depe…

DNA ComplementaryTime FactorsautoantibodiesT-LymphocytesvirusesCD40 LigandImmunologyVaccinia virusBiologyLymphocytic choriomeningitisArticleImmunoglobulin GVirusMice03 medical and health sciences0302 clinical medicineAntigenmedicineAnimalsHumansLymphocytic choriomeningitis virusImmunology and AllergyTissue DistributionCD40 AntigensB cellGene Library030304 developmental biologyB-Lymphocytes0303 health sciencesvirus-induced immunopathologyAutoantibodyAntiviral antibodySEREXbiology.organism_classificationmedicine.diseaseVirologytumor immunity3. Good healthMice Inbred C57BLmedicine.anatomical_structureDatabases as TopicVesicular stomatitis virusImmunoglobulin GImmunologybiology.proteinAlgorithms030215 immunologyJournal of Experimental Medicine
researchProduct

A genetic background with low mutational robustness is associated with increased adaptability to a novel host in an RNA virus.

2009

Although mutational robustness is central to many evolutionary processes, its relationship to evolvability remains poorly understood and has been very rarely tested experimentally. Here, we measure the evolvability of Vesicular stomatitis virus in two genetic backgrounds with different levels of mutational robustness. We passaged the viruses into a novel cell type to model a host-jump episode, quantified changes in infectivity and fitness in the new host, evaluated the cost of adaptation in the original host and analyzed the genetic basis of this adaptation. Lineages evolved from the less robust genetic background demonstrated increased adaptability, paid similar costs of adaptation to the …

GeneticsExperimental evolutionbiologymedia_common.quotation_subjectRobustness (evolution)RNARNA virusVesiculovirusbiology.organism_classificationAdaptation PhysiologicalAdaptabilityEvolvabilityDogsVesicular stomatitis virusHost-Pathogen InteractionsAnimalsEcology Evolution Behavior and SystematicsCells CulturedNeutral mutationmedia_commonJournal of evolutionary biology
researchProduct

Clonal Interference and the Evolution of RNA Viruses

1999

In asexual populations, beneficial mutations that occur in different lineages compete with one another. This phenomenon, known as clonal interference, ensures that those beneficial mutations that do achieve fixation are of large effect. Clonal interference also increases the time between fixations, thereby slowing the adaptation of asexual populations. The effects of clonal interference were measured in the asexual RNA virus vesicular stomatitis virus; rates and average effects of beneficial mutations were quantified.

GeneticsLikelihood FunctionsModels StatisticalMultidisciplinaryGenes ViralbiologyClonal interferenceRNARNA virusVirus Replicationbiology.organism_classificationAdaptation PhysiologicalBiological EvolutionModels BiologicalVesicular stomatitis Indiana virusCell LineGene FrequencyVesicular stomatitis virusCricetinaeMutationConfidence IntervalsAnimalsScience
researchProduct

Is group selection a factor modulating the virulence of RNA viruses?

1997

RNA viruses consist of populations of extremely high genetic heterogeneity called quasispecies. Based on theoretical considerations, it has been suggested that the unit of selection in such complex genetic populations is not the single viral particle but a set of genetically related particles which form the quasispecies. In the present study we carried out a set of experiments with the vesicular stomatitis virus (VSV) dealing with the evolution of life-history characters under selection acting at two factors either in the same or in opposite directions. The two factors at which selective pressure is applied are the individual and the group. We show evidence that group selection modulates th…

GeneticsModels GeneticVirulenceGenetic heterogeneityRNAVirulenceUnit of selectionGeneral MedicineViral quasispeciesBiologybiology.organism_classificationVesicular stomatitis Indiana virusGroup selectionGenetics PopulationVesicular stomatitis virusMultivariate AnalysisGeneticsRNA VirusesSelection GeneticSelection (genetic algorithm)Genetical research
researchProduct

The evolution of RNA viruses: A population genetics view.

2000

RNA viruses are excellent experimental models for studying evolution under the theoretical framework of population genetics. For a proper justification of this thesis we have introduced some properties of RNA viruses that are relevant for studying evolution. On the other hand, population genetics is a reductionistic theory of evolution. It does not consider or make simplistic assumptions on the transformation laws within and between genotypic and phenotypic spaces. However, such laws are minimized in the case of RNA viruses because the phenotypic space maps onto the genotypic space in a much more linear way than on higher DNA-based organisms. Under experimental conditions, we have tested th…

GeneticsMultidisciplinarybiologyvirusesRNAPopulation geneticsGenetic Variationbiology.organism_classificationBiological EvolutionVirusEffective population sizeVesicular stomatitis virusMolecular evolutionViral evolutionColloquium PaperGenetic variationRNA VirusesProceedings of the National Academy of Sciences of the United States of America
researchProduct

Rate of deleterious mutation and the distribution of its effects on fitness in vesicular stomatitis virus

1999

Despite their importance, the parameters describing the spontaneous deleterious mutation process have not been well described in many organisms. If mutations are important for the evolution of every living organism, their importance becomes critical in the case of RNA-based viruses, in which the frequency of mutation is orders of magnitude larger than in DNA-based organisms. The present work reports minimum estimates of the deleterious mutation rate, as well as the characterization of the distribution of deleterious mutational effects on the total fitness of the vesicular stomatitis virus (VSV). The estimates are based on mutation-accumulation experiments in which selection against deleteri…

GeneticsMutation rateExperimental evolutionMutational meltdownGenetic driftbiologyVesicular stomatitis virusMutation (genetic algorithm)Mutation–selection balancebiology.organism_classificationEcology Evolution Behavior and SystematicsSelection (genetic algorithm)Journal of Evolutionary Biology
researchProduct

The cost of replication fidelity in an RNA virus

2005

It is often argued that high mutation rates are advantageous for RNA viruses, because they confer elevated rates of adaptation. However, there is no direct evidence showing a positive correlation between mutation and adaptation rates among RNA viruses. Moreover, theoretical work does not argue in favor of this prediction. We used a series of vesicular stomatitis virus clones harboring single amino acid substitutions in the RNA polymerase to demonstrate that changes inducing enhanced fidelity paid a fitness cost, but that there was no positive correlation between mutation an adaptation rates. We demonstrate that the observed mutation rate in vesicular stomatitis virus can be explained by a t…

GeneticsMutation rateMultidisciplinaryAdaptation BiologicalRNARNA virusDNA-Directed RNA PolymerasesBiological SciencesBiologyVesicular stomatitis Indiana virusVirus Replicationbiology.organism_classificationVirologyVesicular stomatitis Indiana viruschemistry.chemical_compoundAmino Acid SubstitutionchemistryViral replicationVesicular stomatitis virusRNA polymeraseMutation (genetic algorithm)Mutagenesis Site-DirectedSelection GeneticProceedings of the National Academy of Sciences
researchProduct