Search results for "Crypt"

showing 10 items of 1111 documents

Ancestral Reconstruction and Investigations of Genomic Recombination on some Pentapetalae Chloroplasts

2019

Abstract In this article, we propose a semi-automated method to rebuild genome ancestors of chloroplasts by taking into account gene duplication. Two methods have been used in order to achieve this work: a naked eye investigation using homemade scripts, whose results are considered as a basis of knowledge, and a dynamic programming based approach similar to Needleman-Wunsch. The latter fundamentally uses the Gestalt pattern matching method of sequence matcher to evaluate the occurrences probability of each gene in the last common ancestor of two given genomes. The two approaches have been applied on chloroplastic genomes from Apiales, Asterales, and Fabids orders, the latter belonging to Pe…

Ancestral reconstructionMost recent common ancestor0206 medical engineeringGenomic recombination02 engineering and technology[INFO.INFO-SE]Computer Science [cs]/Software Engineering [cs.SE]Dynamic programmingGenome[INFO.INFO-IU]Computer Science [cs]/Ubiquitous ComputingEvolution Molecular[INFO.INFO-CR]Computer Science [cs]/Cryptography and Security [cs.CR]AsteralesGene duplication0202 electrical engineering electronic engineering information engineeringPattern matchingGenome ChloroplastRosaceaeResearch ArticlesPhylogenySequence (medicine)Recombination GeneticbiologyGeneral Medicinebiology.organism_classification[INFO.INFO-MO]Computer Science [cs]/Modeling and SimulationAncestral genome reconstructionApialesEvolutionary biology[INFO.INFO-MA]Computer Science [cs]/Multiagent Systems [cs.MA]020201 artificial intelligence & image processing[INFO.INFO-ET]Computer Science [cs]/Emerging Technologies [cs.ET][INFO.INFO-DC]Computer Science [cs]/Distributed Parallel and Cluster Computing [cs.DC]Pentapetalae chloroplasts020602 bioinformaticsTP248.13-248.65BiotechnologyJournal of Integrative Bioinformatics
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Peptides of the Constant Region of Antibodies Display Fungicidal Activity

2012

Synthetic peptides with sequences identical to fragments of the constant region of different classes (IgG, IgM, IgA) of antibodies (Fc-peptides) exerted a fungicidal activity in vitro against pathogenic yeasts, such as Candida albicans, Candida glabrata, Cryptococcus neoformans, and Malassezia furfur, including caspofungin and triazole resistant strains. Alanine-substituted derivatives of fungicidal Fc-peptides, tested to evaluate the critical role of each residue, displayed unaltered, increased or decreased candidacidal activity in vitro. An Fc-peptide, included in all human IgGs, displayed a therapeutic effect against experimental mucosal and systemic candidiasis in mouse models. It is in…

Antifungal AgentsErythrocyteslcsh:MedicineImmunoglobulin Gchemistry.chemical_compoundEchinocandinsMiceCaspofunginCandida albicanslcsh:ScienceCandida albicansMice Inbred BALB CMultidisciplinarybiologyCandidiasisAnimal ModelsInfectious DiseasesMedicineFemaleMalasseziaImmunoglobulin Constant RegionsResearch ArticleImmunologyMycologyMicrobial Sensitivity TestsMicrobiologyHemolysisAntibodiesMicrobiologyLipopeptidesImmune systemModel OrganismsDrug Resistance FungalmedicineAnimalsHumansBiologyCryptococcus neoformansMalasseziaCandida glabratalcsh:RImmunityTriazolesbiology.organism_classificationmedicine.diseaseImmunoglobulin ADisease Models AnimalchemistryImmunoglobulin MImmunoglobulin Gbiology.proteinCryptococcus neoformanslcsh:QSystemic candidiasisCaspofunginPeptidesPLoS ONE
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Synthesis and antimicrobial activity of new 3-(1-R-3(5)-methyl-4-nitroso-1H-5(3)-pyrazolyl)-5-methylisoxazoles.

2000

A number of new 3-(1-R-3(5)-methyl-4-nitroso-1H-5(3)-pyrazolyl)-5-methylisoxazoles 6a-g (7b-f) were synthesized and tested for antibacterial and antifungal activity. Some of these compounds displayed antifungal activity at non-cytotoxic concentrations. Derivative 6c was 9 times more potent in vitro than miconazole and 20 times more selective against C. neoformans. 6c was also 8- and 125-fold more potent than amphotericin B and fluconazole, respectively. None of the compounds was active against bacteria. Preliminary structure-activity relationship (SAR) studies showed that the NO group at position 4 of the pyrazole ring is essential for the activity. Lipophilicity of the pyrazole moiety, N-a…

Antifungal AgentsStereochemistryClinical BiochemistryPharmaceutical ScienceMicrobial Sensitivity TestsPyrazoleGram-Positive BacteriaBiochemistryChemical synthesischemistry.chemical_compoundStructure-Activity RelationshipAnti-Infective AgentsDrug DiscoveryGram-Negative BacteriamedicineMoietyHumansCytotoxicityMolecular BiologyChemistryOrganic ChemistryFungiNitrosoIsoxazolesAntimicrobialAnti-Bacterial AgentsLipophilicityCryptococcus neoformansHIV-1Molecular MedicineMiconazolemedicine.drugBioorganicmedicinal chemistry
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Chemical and antifungal investigations of six Lippia species (Verbenaceae) from Brazil

2012

Made available in DSpace on 2013-09-27T14:52:47Z (GMT). No. of bitstreams: 1 WOS000310396700165.pdf: 536437 bytes, checksum: d267984ddfcb57d1406b069856adcc25 (MD5) Previous issue date: 2012-12-01 Made available in DSpace on 2013-09-30T19:10:31Z (GMT). No. of bitstreams: 1 WOS000310396700165.pdf: 536437 bytes, checksum: d267984ddfcb57d1406b069856adcc25 (MD5) Previous issue date: 2012-12-01 Submitted by Vitor Silverio Rodrigues (vitorsrodrigues@reitoria.unesp.br) on 2014-05-20T14:20:39Z No. of bitstreams: 1 WOS000310396700165.pdf: 536437 bytes, checksum: d267984ddfcb57d1406b069856adcc25 (MD5) Made available in DSpace on 2014-05-20T14:20:39Z (GMT). No. of bitstreams: 1 WOS000310396700165.pdf: …

AntifungalAntifungal AgentsIridoidStereochemistrymedicine.drug_classPharmaceutical ScienceMicrobial Sensitivity TestsCandida parapsilosisAntifungalAnalytical Chemistrychemistry.chemical_compoundVerbascosideCandida kruseiBotanyVerbenaceaeDrug DiscoverymedicineCandida albicansCandida spp.Cryptococcus neoformansPharmacologyLippiaTraditional medicinebiologyPlant ExtractsChemistryVerbenaceaeOrganic ChemistryFungiGeneral MedicineDereplicationbiology.organism_classificationComplementary and alternative medicineCryptococcus neoformansMolecular MedicineLippiaLippia sppBrazilFood SciencePlanta Medica
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Specific bovine antibody response against a new recombinant Cryptosporidium parvum antigen containing 4 zinc-finger motifs

2002

A Cryptosporidium parvum sporozoite and oocyst lambda gt11 cDNA library was screened with a hyperimmune rabbit serum that was developed against insoluble fragments of ultrasonicated oocysts. A clone named Cp22.4.1 encoding a protein of 231 amino acids with 4 zinc-finger domains characterized by a Cys-X2-Cys-X4-His-X4-Cys motif was isolated and characterized. There was a complete match between the sequencing data of the coding region of Cp22.4.1 and the corresponding gene at chromosomal level. Cloning in a pBAD-TOPO-TA expression vector permitted to evaluate the antigenicity of the recombinant His-tagged antigen. This antigen was recognized by 2 out of 5 sera from Cryptosporidium immune calv…

Antigenicityanimal diseasesMolecular Sequence DataProtozoan ProteinsAntibodies ProtozoanAntigens ProtozoanMolecular cloningBrief Communicationlaw.inventionAntigenlawparasitic diseasesAnimalsAmino Acid SequenceZinc fingerCryptosporidium parvumExpression vectorbiologyBase SequencecDNA libraryZinc Fingersbiology.organism_classificationVirologyRecombinant ProteinsInfectious DiseasesCryptosporidium parvumRecombinant DNAParasitologyCattleRabbits
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A Hardware and Secure Pseudorandom Generator for Constrained Devices

2018

Hardware security for an Internet of Things or cyber physical system drives the need for ubiquitous cryptography to different sensing infrastructures in these fields. In particular, generating strong cryptographic keys on such resource-constrained device depends on a lightweight and cryptographically secure random number generator. In this research work, we have introduced a new hardware chaos-based pseudorandom number generator, which is mainly based on the deletion of an Hamilton cycle within the $N$ -cube (or on the vectorial negation), plus one single permutation. We have rigorously proven the chaotic behavior and cryptographically secure property of the whole proposal: the mid-term eff…

Applied cryptography; Chaotic circuits; Constrained devices; Discrete dynamical systems; FPGA; Lightweight Cryptography; Random number generators; Statistical tests; Control and Systems Engineering; Information Systems; Computer Science Applications1707 Computer Vision and Pattern Recognition; Electrical and Electronic EngineeringHardware security moduleComputer scienceRandom number generationCryptography[INFO.INFO-SE]Computer Science [cs]/Software Engineering [cs.SE]02 engineering and technologyPseudorandom generatorConstrained devicesLightweight CryptographyChaotic circuits[INFO.INFO-IU]Computer Science [cs]/Ubiquitous Computing[INFO.INFO-CR]Computer Science [cs]/Cryptography and Security [cs.CR]PermutationRandom number generatorsStatistical tests0202 electrical engineering electronic engineering information engineeringElectrical and Electronic EngineeringField-programmable gate arrayThroughput (business)FPGAPseudorandom number generatorGenerator (category theory)business.industry020208 electrical & electronic engineeringComputer Science Applications1707 Computer Vision and Pattern Recognition020206 networking & telecommunicationsDiscrete dynamical systems[INFO.INFO-MO]Computer Science [cs]/Modeling and SimulationComputer Science ApplicationsApplied cryptography[INFO.INFO-MA]Computer Science [cs]/Multiagent Systems [cs.MA]Control and Systems EngineeringKey (cryptography)[INFO.INFO-ET]Computer Science [cs]/Emerging Technologies [cs.ET][INFO.INFO-DC]Computer Science [cs]/Distributed Parallel and Cluster Computing [cs.DC]businessComputer hardwareInformation SystemsIEEE Transactions on Industrial Informatics
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Water and oxoanion encapsulation chemistry in a 1H-pyrazole azacryptand

2019

Anion complexes of the cryptand built with the tripodal amine tris(2-aminoethyl)amine, known as tren, with water and several oxoanions of biological and environmental interest (nitrate, sulfate, phosphate, perchlorate and arsenate) have been crystallized from aqueous solution and resolved with single-crystal X-ray diffraction. All crystals show guest species encapsulated in the interior of the cavity as well as, in some cases, sitting in the grooves defined by the arms of the macrocycle. Hydrogen bonding and electrostatic interactions play a major role in anion binding to the host. The macrocycle is able to encapsulate anions in a wide range of protonation degrees. Solution studies have bee…

Aqueous solutionChemistryHydrogen bondCryptandProtonation02 engineering and technologyGeneral ChemistryPyrazole010402 general chemistry021001 nanoscience & nanotechnology01 natural sciencesCatalysis0104 chemical sciencesPerchloratechemistry.chemical_compoundPolymer chemistryMaterials ChemistryAmine gas treating0210 nano-technologyAnion bindingNew Journal of Chemistry
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Teaching Archaeological Heritage Management: Towards a Change in Paradigms

2018

The concept of archaeological heritage management (AHM) has been key to wider archaeological research and preservation agendas for some decades. Many universities and other education providers now offer what is best termed heritage management education (HME) in various forms. The emphasis is commonly on archaeological aspects of heritage in a broad sense and different terms are often interchangeable in practice. In an innovative working-conference held in Tampere, Finland, we initiated a debate on what the components of AHM as a course or curriculum should include. We brought together international specialists and discussed connected questions around policy, practice, research and teaching/…

ArcheologyHistoryarchaeological heritage managementConservationInnovación educacional615 History and ArchaeologyArqueologíaArchaeological research11. Sustainabilityta616harjoittelu0601 history and archaeologyta615training060101 anthropology060102 archaeologymuinaisjäännöksetEnvironmental ethicsarkeologia06 humanities and the artsMétodo de aprendizajeteachingkulttuuriperintöheritage management educationKey (cryptography)Archaeological heritageConservation and Management of Archaeological Sites
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Location and orientation technologies based on Wi-Fi systems for people with disabilities in indoor environment

2016

In this chapter we review the developments made in the technology of location and positioning inside buildings and pilot tests that have been carried. First, as a general framework we will begin by reviewing the key elements that influence in technological development (the activity, the operator, the environment, and the technology). In the next section, we describe the most important advances and development carried out on people with different disabilities. Finally, in the concluding section we try to draw the lines that we believe should continue future development.

Architectural engineeringGeographyOrientation (computer vision)Section (archaeology)Key (cryptography)Simulation
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RTS2 - the Remote Telescope System

2010

RTS2 is an open source observatory manager. It was written from scratch in the C++ language, with portability and modularity in mind. Its driving requirements originated from quick follow-ups of Gamma Ray Bursts. After some years of development it is now used to carry tasks it was originally not intended to carry. This article presents the current development status of the RTS2 code. It focuses on describing strategies which worked as well as things which failed to deliver expected results. Copyright © 2010 Petr Kubánek.

Article Subjectbusiness.industryComputer sciencelcsh:AstronomyCarry (arithmetic)FOS: Physical sciencesAstronomy and Astrophysicslaw.inventionTelescopelcsh:QB1-991Software portabilitySpace and Planetary SciencelawObservatoryCode (cryptography)Gamma-ray burstSoftware engineeringbusinessAstrophysics - Instrumentation and Methods for AstrophysicsInstrumentation and Methods for Astrophysics (astro-ph.IM)
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