0000000001119709

AUTHOR

Dominique Garmyn

showing 30 related works from this author

Cloning and expression of genes involved in conidiation and surface properties of Penicillium camemberti grown in liquid and solid cultures.

2008

International audience; Based on bioinformatic data on model fungi, the rodA and wetA genes encoding, respectively, a RodA hydrophobin protein and the WetA protein involved in conidiation mechanisms, were PCR-cloned and characterized for the first time in Penicillium camemberti. These results, completed by a sequence of the brlA gene (available in GenBank), which encodes a major transcriptional regulator also involved in the conidiation mechanism, were used to compare, by qRT-PCR, the expression of the three genes in liquid and solid cultures in a synthetic medium. While expression of the brlA and wetA genes increased dramatically in both culture conditions after 4 days of growth, expressio…

MESH: Sequence Analysis DNAMESH : Spores FungalMESH : Molecular Sequence DataConidiationMESH: Amino Acid SequenceMESH: Base SequenceGene Expression Regulation FungalGene expressionMESH : Fungal ProteinsCloning MolecularFungal proteinMESH : Amino Acid SequenceMESH : Sequence AlignmentGeneral MedicineSpores FungalMESH: MyceliumCell biologyWetaPenicillium camembertiMESH: Fungal ProteinsMESH : HydrophobicityHydrophobic and Hydrophilic InteractionsMESH : MyceliumMESH: Gene Expression Regulation FungalHyphaMESH : Cloning MolecularHydrophobinMolecular Sequence DataMESH: Sequence AlignmentBiologyMicrobiologyMicrobiologyFungal ProteinsMESH: Spores FungalMESH : Gene Expression Regulation FungalMESH: Cloning Molecular[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyAmino Acid SequenceMolecular BiologyGene[ SDV.BBM ] Life Sciences [q-bio]/Biochemistry Molecular BiologyMESH: PenicilliumMESH: HydrophobicityMESH: Molecular Sequence DataBase SequenceMyceliumPenicilliumSequence Analysis DNAMESH : Penicilliumbiology.organism_classificationCulture MediaMESH: Culture MediaMESH : Base SequenceMESH : Culture MediaSequence AlignmentMESH : Sequence Analysis DNA
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Truncated internalin A and asymptomatic Listeria monocytogenes carriage: in vivo investigation by allelic exchange

2004

ABSTRACT Allelic exchange of the region coding for the C terminus of InlA between one epidemic (with an 80-kDa InlA) and one asymptomatic (with a 47-kDa InlA) carriage Listeria monocytogenes strain confirmed the need for this region for internalin entry in vitro. Interestingly, restoration of internalin A functionality did not result in full virulence in chicken embryo assays.

Molecular Sequence DataImmunologyVirulenceChick Embryomedicine.disease_causeMicrobiologyMicrobiology03 medical and health sciencesBacterial ProteinsListeria monocytogenesIn vivomedicineAnimalsHumansInternalinAlleleAlleles030304 developmental biology0303 health sciencesCellular Microbiology: Pathogen-Host Cell Molecular InteractionsBase SequenceVirulencebiology030306 microbiologyMicrobiology and Parasitologybacterial infections and mycosesbiology.organism_classificationListeria monocytogenesVirologyMicrobiologie et ParasitologieIn vitro3. Good healthInfectious DiseasesCarriage[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyParasitologyCaco-2 CellsBacteria
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Listeria monocytogenes, a down-to-earth pathogen

2013

International audience; Listeria monocytogenes is the causative agent of the food-borne life threatening disease listeriosis. This pathogenic bacterium received much attention in the endeavor of deciphering the cellular mechanisms that underlie the onset of infection and its ability to adapt to the food processing environment. Although information is available on the presence of L. monocytogenes in many environmental niches including soil, water, plants, foodstuff and animals, understanding the ecology of L. monocytogenes in outdoor environments has received less attention. Soil is an environmental niche of pivotal importance in the transmission of this bacterium to plants and animals. Soil…

Microbiology (medical)Listeria[SDV]Life Sciences [q-bio]ImmunologyNicheReview ArticleBiologymedicine.disease_causeoccurrenceMicrobiologycomplex mixturesbiodiversitésoilFoodborne DiseasesListeria;soil;contamination;occurrence;biodiversity;persistence;circulation;environment03 medical and health sciencescontaminationListeria monocytogenesmedicineAnimalsHumans[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyPathogenSoil Microbiology030304 developmental biologybiodiversity2. Zero hungerEcological niche0303 health sciences030306 microbiologyEcologybusiness.industryEdaphicpersistence15. Life on landbiology.organism_classificationListeria monocytogenes6. Clean waterBiotechnologyInfectious Diseases13. Climate action[SDE]Environmental SciencesListeriaFood MicrobiologycirculationAdaptationbusinessSoil microbiologyenvironment
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Cloning and sequencing of the gene encoding α-acetolactate decarboxylase fromLeuconostoc oenos

1996

The alsD gene encoding alpha-acetolactate decarboxylase was isolated from a genomic library of Leuconostoc oenos, using a screening procedure developed on microtiter plates. The nucleotide sequence of alsD encodes a putative protein of 239 amino acids showing significant similarity with other bacterial alpha-acetolactate decarboxylases. Upstream from alsD lies an open reading frame (alsS) which is highly similar to bacterial genes coding for catabolic alpha-acetolactate synthases. Northern (RNA) blotting analyses indicated the presence of a 2.4-kb dicistronic transcript of alsS and alsD. This suggests that the alsS and alsD genes are organized in a single operon.

DNA BacterialCarboxy-LyasesOperonMolecular Sequence DataRestriction MappingBiologyMicrobiologyGene Expression Regulation EnzymologicGeneticsLeuconostocGenomic libraryCloning MolecularMolecular BiologyGeneGeneticsCloningSequence Homology Amino AcidNucleic acid sequenceGene Expression Regulation BacterialSequence Analysis DNABlotting Northernbiology.organism_classificationAcetolactate decarboxylaseAcetolactate SynthaseRNA BacterialOpen reading framePhenotypeBiochemistryGenes BacterialLactatesLeuconostocFEMS Microbiology Letters
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Influence des conditions environnementales (statique versus dynamique) sur le développement en biofilm de Listeria monocytogenes EGD-e. Developpement…

2008

National audience

[SDV] Life Sciences [q-bio][SDE] Environmental Sciencesexpression d'agr[SDV]Life Sciences [q-bio]microscopie confocale[SDE]Environmental SciencesstructureListeria monocytogenesComputingMilieux_MISCELLANEOUSbiofilm
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LisRK is required for optimal fitness ofListeria monocytogenesin soil

2020

ABSTRACTListeria monocytogenes is a food-borne pathogen responsible for the disease listeriosis. It is ubiquitously found in the environment and soil is one of its natural habitats. Listeria monocytogenes is highly capable of coping with various stressful conditions. We hypothesized that stress-responsive two-component systems such as LisRK might contribute to the adaptation of L. monocytogenes to the soil environment. Indeed, investigations of the population dynamics of wild-type and mutant strains suggest an important role of LisRK for optimal fitness of L. monocytogenes in sterile soil. Results from non-sterile soil showed that the parental strain was capable of surviving longer than mut…

MutantPopulation[SDV.SA.SDS]Life Sciences [q-bio]/Agricultural sciences/Soil studymedicine.disease_causecomplex mixturesMicrobiologylmo2522ActinobacteriaMicrobiologySoil03 medical and health sciencesListeria monocytogenesDownregulation and upregulationFitnessGeneticsmedicineeducationMolecular BiologyPathogenGeneSoil Microbiology030304 developmental biology2. Zero hunger0303 health scienceseducation.field_of_studyMicrobial Viabilitybiology030306 microbiologyGene Expression Regulation Bacterial15. Life on landbiology.organism_classificationListeria monocytogenesRNA BacterialGenes BacterialMutationlisRKDormancyFEMS Microbiology Letters
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Purification of Leuconostoc mesenteroides citrate lyase and cloning and characterization of the citCDEFG gene cluster

1998

ABSTRACT A citrate lyase (EC 4.1.3.6 ) was purified 25-fold from Leuconostoc mesenteroides and was shown to contain three subunits. The first 42 amino acids of the β subunit were identified, as well as an internal peptide sequence spanning some 20 amino acids into the α subunit. Using degenerated primers from these sequences, we amplified a 1.2-kb DNA fragment by PCR from Leuconostoc mesenteroides subsp. cremoris . This fragment was used as a probe for screening a Leuconostoc genomic bank to identify the structural genes. The 2.7-kb gene cluster encoding citrate lyase of L. mesenteroides is organized in three open reading frames, citD , citE , and citF , encoding, respectively, the three ci…

DNA BacterialATP citrate lyaseMolecular Sequence DataGene ExpressionBiologymedicine.disease_causeMicrobiologyBacterial ProteinsCarbon-Sulfur LigasesMultienzyme ComplexesGene clusterAcyl Carrier ProteinEscherichia colimedicineLeuconostocAmino Acid SequenceCloning MolecularMolecular BiologyEscherichia coliBase SequenceSequence Homology Amino AcidStructural geneOxo-Acid-LyasesSequence Analysis DNALyasebiology.organism_classificationEnzymes and ProteinsMolecular biologyOxaloacetate decarboxylaseBiochemistryGenes BacterialLeuconostoc mesenteroidesMultigene FamilyCoenzyme A-TransferasesLeuconostoc
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Mutation of the oxaloacetate decarboxylase gene of Lactococcus lactis subsp. lactis impairs the growth during citrate metabolism

2007

 ; Aims: Citrate metabolism generates metabolic energy through the generation of a membrane potential and a pH gradient. The purpose of this work was to study the influence of oxaloacetate decarboxylase in citrate metabolism and intracellular pH maintenance in relation to acidic conditions. Methods and Results: A Lactococcus lactis oxaloacetate decarboxylase mutant [ILCitM (pFL3)] was constructed by double homologous recombination. During culture with citrate, and whatever the initial pH, the growth rate of the mutant was lower. In addition, the production of diacetyl and acetoin was altered in the mutant strain. However, our results indicated no relationship with a change in the maintenanc…

Oxaloacetic AcidATP citrate lyaseCarboxy-LyasesCITRATE METABOLISMIntracellular pHMolecular Sequence DataDiacetylACIDE LACTIQUEApplied Microbiology and BiotechnologyCitric Acidchemistry.chemical_compoundLACTIC ACID BACTERIAOxaloacetic acidCitrate synthaseBacteriological TechniquesBase SequencebiologyOXALOACETATE DECARBOXYLASEAcetoinLactococcus lactisGeneral MedicineHydrogen-Ion Concentrationbiology.organism_classificationLactococcus lactis[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyOxaloacetate decarboxylaseBiochemistrychemistryGenes BacterialFermentationMutationINTRACELLULAR PHFood Microbiologybiology.proteinGenetic EngineeringCitric acidPhosphoenolpyruvate carboxykinaseBiotechnologyJournal of Applied Microbiology
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Agr system of Listeria monocytogenes EGD-e: role in adherence and differential expression pattern.

2007

ABSTRACT In this study, we investigated the agrBDCA operon in the pathogenic bacterium Listeria monocytogenes EGD-e. In-frame deletion of agrA and agrD resulted in an altered adherence and biofilm formation on abiotic surfaces, suggesting the involvement of the agr system of L. monocytogenes during the early stages of biofilm formation. Real-time PCR experiments indicated that the transcript levels of agrBDCA depended on the stage of biofilm development, since the levels were lower after the initial attachment period than during biofilm growth, whereas transcription during planktonic growth was not growth phase dependent. The mRNA quantification data also suggested that the agr system was a…

MESH : RNA MessengerTranscription GeneticOperon[ SDV.MP.BAC ] Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriologymedicine.disease_causeMESH: Listeria monocytogenesApplied Microbiology and BiotechnologyBacterial AdhesionRapid amplification of cDNA endsTranscription (biology)MESH : Bacterial ProteinsMESH : DNA BacterialMESH: Bacterial Proteins0303 health sciencesMESH : Trans-ActivatorsMESH: Gene Expression Regulation BacterialEcologycell-to-cell communicationMESH : BiofilmsBiotechnologyMESH : Gene Expression Regulation BacterialDNA BacterialMESH : Bacterial AdhesionMESH: Trans-ActivatorsGenetics and Molecular BiologyMESH: BiofilmsBiologyagr systemMicrobiology03 medical and health sciencesListeria monocytogenesBacterial ProteinsmedicineMESH: Bacterial AdhesionRNA MessengerGene030304 developmental biologyMESH: RNA MessengerMessenger RNA030306 microbiologyMESH: Transcription GeneticBiofilmMESH : Transcription GeneticGene Expression Regulation Bacterialbiochemical phenomena metabolism and nutritionbiology.organism_classificationMolecular biologyMESH: DNA Bacterial[SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/BacteriologyListeria monocytogenesBiofilmsbiofilm formationTrans-ActivatorsMESH : Listeria monocytogenesBacteriaFood ScienceApplied and environmental microbiology
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Regulation of stress response in Oenococcus oeni as a function of environmental changes and growth phase

2000

International audience; Oenococcus oeni is a lactic acid bacterium which is able to grow in wine and perform malolactic fermentation. To survive and grow in such a harsh environment as wine, O. oeni uses several mechanisms of resistance including stress protein synthesis. The molecular characterisation of three stress genes hsp18, clpX, trxA encoding for a small heat shock protein, an ATPase regulation component of ClpP protease and a thioredoxin, respectively, allow us to suggest the existence in O. oeni of multiple regulation mechanisms as is the case in Bacillus subtilis. One common feature of these genes is that they are expressed under the control of housekeeping promoters. The express…

Transcription Geneticmedicine.medical_treatment[SDV]Life Sciences [q-bio]bactérie lactiqueBacillus subtilisatpaseMicrobiologygène clppoenococcus oenicaractérisation moléculaire03 medical and health sciencesBacterial ProteinsHeat shock proteinOenococcus;Malolactic fermentation;Stress gene;ATPaseMalolactic fermentationmedicineprotéine de choc thermiquePromoter Regions GeneticGeneHeat-Shock ProteinsOenococcus030304 developmental biologyOenococcus oeniAdenosine Triphosphatases0303 health sciencesProteasebiology030306 microbiologyMalolactic fermentationStress genefood and beveragesGeneral MedicineHydrogen-Ion Concentrationbiology.organism_classificationGram-Positive CocciBiochemistryThioredoxinOenococcusLeuconostocFood Scienceexpression des gènes
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Communication and Autoinduction in the species Listeria monocytogenes

2014

International audience; In order to withstand changes in their environment, bacteria have evolved mechanisms to sense the surrounding environment, integrate these signals and adapt their physiology to thrive under fluctuating conditions. Among these mechanisms, the ability of bacteria to exchange information between cells has become a dynamic field of interest for microbiologists over the past four decades. First described by Nelson et al.,1 this phenomenon often referred as either cell-cell communication, Quorum Sensing and/or AutoInduction involves the synthesis of small signal molecules called autoinducers. These signal molecules may be sensed by the bacterial population in the vicinity …

[SDV.SA]Life Sciences [q-bio]/Agricultural sciencesRegulation of gene expressionlisteriabiologycommunicationMini ReviewsBiofilmquorum sensingregulationBacterial populationComputational biologymedicine.disease_causebiology.organism_classificationagr systembiofilmMicrobiologyvirulenceQuorum sensing[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyListeria monocytogenesmedicineListeriaAutoinducerGeneral Agricultural and Biological SciencesBacteriaCommunicative & Integrative Biology
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The Agr communication system provides a benefit to the populations of Listeria monocytogenes in soil

2014

International audience; In this study, we investigated whether the Agr communication system of the pathogenic bacterium Listeria monocytogenes was involved in adaptation and competitiveness in soil. Alteration of the ability to communicate, either by deletion of the gene coding the response regulator AgrA (response-negative mutant) or the signal pro-peptide AgrD (signal-negative mutant), did not affect population dynamics in soil that had been sterilized but survival was altered in biotic soil suggesting that the Agr system of L. monocytogenes was involved to face the complex soil biotic environment. This was confirmed by a set of co-incubation experiments. The fitness of the response-negat…

Bacillus-subtilisMutantlcsh:QR1-502Genetic Fitnessmicrobial ecologymedicine.disease_causelcsh:MicrobiologyQuorum-sensing systemsOriginal Research ArticlePseudomonas-aeruginosaSoil Microbiology2. Zero hunger0303 health sciencesMutationeducation.field_of_studycompetitivenessMicrobiology and Parasitologycell communicationMicrobiologie et ParasitologiefitnessAgricultural sciences[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyInfectious DiseasesSoil microbiologyMicrobiology (medical)PopulationImmunologyLactobacillus-plantarum[SDV.SA.SDS]Life Sciences [q-bio]/Agricultural sciences/Soil studyBiologyMicrobiologyMicrobiologysoil03 medical and health sciences[ SDV.SA.AGRO ] Life Sciences [q-bio]/Agricultural sciences/AgronomyBacterial ProteinsListeria monocytogenesmedicineAgr system;cell communication;competitiveness;fitness;Listeria monocytogenes;soil;biotic interaction;quorum-sensing systems;expression;farm environment;dairy farm;bacterial-populations;pseudomonas-aeruginosa;microbial world;lactobacillus-plantarum;staphylococcus-aureus;bacillus-subtilisStaphylococcus-aureuseducationGene030304 developmental biology[ SDV ] Life Sciences [q-bio]Bacterial-populations030306 microbiologybiotic interactionFarm environmentListeria monocytogenesResponse regulatorMutationDairy farmGenetic Fitnessmicrobial worldSciences agricolesAgr system
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Evidence of autoinduction heterogeneity via expression of the agr system of listeria monocytogenes at the single-cell level

2011

ABSTRACT To investigate if the primary function of the Agr system of Listeria monocytogenes is to monitor cell density, we followed Agr expression in batch cultures, in which the autoinducer concentration was uniform, and in biofilms. Expression was heterogeneous, suggesting that the primary function of Agr is not to monitor population density.

listeria monocytogenes growth and developmentbiofilms growth and developmentBiologyCellular levelmedicine.disease_causeApplied Microbiology and Biotechnology[ SDV.EE ] Life Sciences [q-bio]/Ecology environmentMicrobiologygene expression regulation bacterial03 medical and health sciencesListeria monocytogenesBacterial ProteinsCell densitymedicinelisteria monocytogenes genetics030304 developmental biology[SDV.EE]Life Sciences [q-bio]/Ecology environment0303 health sciencesEcology030306 microbiologyBiofilmquorum sensingGene Expression Regulation Bacterialbiochemical phenomena metabolism and nutritionbacterial infections and mycosesListeria monocytogenesbacterial proteins biosynthesisBiofilmsFood MicrobiologybacteriaAutoinducerFunction (biology)Food ScienceBiotechnology
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Listeria monocytogenes EGD-e biofilms: no mushrooms but a network of knitted chains.

2008

ABSTRACT Listeria monocytogenes is a food pathogen that can attach on most of the surfaces encountered in the food industry. Biofilms are three-dimensional microbial structures that facilitate the persistence of pathogens on surfaces, their resistance toward antimicrobials, and the final contamination of processed goods. So far, little is known about the structural dynamics of L. monocytogenes biofilm formation and its regulation. The aims of this study were, by combining genetics and time-lapse laser-scanning confocal microscopy (LSCM), (i) to characterize the structural dynamics of L. monocytogenes EGD-e sessile growth in two nutritional environments (with or without a nutrient flow), and…

Image ProcessingMESH : Analysis of Variance[ SDV.MP.BAC ] Life Sciences [q-bio]/Microbiology and Parasitology/BacteriologyMESH : Green Fluorescent Proteinsmedicine.disease_causeMESH: Listeria monocytogenesApplied Microbiology and BiotechnologyBacterial Adhesionlaw.inventionGreen fluorescent proteinPlasmidComputer-AssistedlawGenes ReporterImage Processing Computer-AssistedMESH : Bacterial ProteinsMESH: Microscopy ConfocalPathogenMESH: Bacterial Proteins2. Zero hunger0303 health sciencesMicroscopyMicroscopy ConfocalPhotobleachingEcologybiologyMESH: KineticsMESH : Genes ReporterMESH: Image Processing Computer-AssistedMESH : BiofilmsConfocalMESH : KineticsMESH: PhotobleachingMESH : Image Processing Computer-AssistedBiotechnologyPlasmidsMESH : Bacterial AdhesionConfocalGreen Fluorescent ProteinsMESH: BiofilmsMESH : PhotobleachingMicrobiology03 medical and health sciencesMESH: Gene Expression ProfilingMESH: Green Fluorescent ProteinsListeria monocytogenesBacterial ProteinsConfocal microscopyMESH: PlasmidsMESH: Analysis of VariancemedicineMESH: Bacterial AdhesionMESH : Microscopy ConfocalReporter030304 developmental biologyAnalysis of Variance030306 microbiologyMESH : Gene Expression ProfilingGene Expression ProfilingMESH: Genes ReporterBiofilmbiochemical phenomena metabolism and nutritionbiology.organism_classification[SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/BacteriologyListeria monocytogenesCulture MediaKineticsGenesMESH : PlasmidsBiofilmsMESH: Culture MediaFood MicrobiologyMESH : Culture MediaMESH : Listeria monocytogenesBacteriaFood ScienceApplied and environmental microbiology
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Microbial diversity and structure are drivers of the biological barrier effect against Listeria monocytogenes in soil

2013

International audience; Understanding the ecology of pathogenic organisms is important in order to monitor their transmission in the environment and the related health hazards. We investigated the relationship between soil microbial diversity and the barrier effect against Listeria monocytogenes invasion. By using a dilution-to-extinction approach, we analysed the consequence of eroding microbial diversity on L. monocytogenes population dynamics under standardised conditions of abiotic parameters and microbial abundance in soil microcosms. We demonstrated that highly diverse soil microbial communities act as a biological barrier against L. monocytogenes invasion and that phylogenetic compos…

[SDV.SA]Life Sciences [q-bio]/Agricultural sciencesBiodiversité et EcologiePopulation DynamicsBiodiversitylcsh:MedicineRNA Ribosomal 16Slcsh:SciencePhylogenySoil MicrobiologyAbiotic component0303 health scienceseducation.field_of_studyMultidisciplinaryMicrobial ViabilityEcologyrespiratory systemerosioninvasionAgricultural sciencespyrosequencingMicrocosmSoil microbiologyResearch ArticlePopulationérosionBiologyDNA Ribosomalcomplex mixturessurvivaldiversitysoilBiodiversity and Ecology03 medical and health sciencesMicrobial ecologyRNA Ribosomal 18SSoil ecologyeducationdiversity;erosion;pyrosequencing;invasion;Listeria monocytogenes;soil;survivalEcosystem030304 developmental biologydiversitéMicrobial ViabilityBacteria030306 microbiologylcsh:RGenetic VariationSequence Analysis DNA15. Life on landListeria monocytogenespyroséquençage13. Climate actionlcsh:Q[SDE.BE]Environmental Sciences/Biodiversity and Ecologyhuman activitiesSciences agricoles
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Survival of Listeria monocytogenes in Soil Requires AgrA-Mediated Regulation

2015

ABSTRACT In a recent paper, we demonstrated that inactivation of the Agr system affects the patterns of survival of Listeria monocytogenes (A.-L. Vivant, D. Garmyn, L. Gal, and P. Piveteau, Front Cell Infect Microbiol 4:160, http://dx.doi.org/10.3389/fcimb.2014.00160 ). In this study, we investigated whether the Agr-mediated response is triggered during adaptation in soil, and we compared survival patterns in a set of 10 soils. The fate of the parental strain L. monocytogenes L9 (a rifampin-resistant mutant of L. monocytogenes EGD-e) and that of a Δ agrA deletion mutant were compared in a collection of 10 soil microcosms. The Δ agrA mutant displayed significantly reduced survival in these b…

RNA UntranslatedTranscription GeneticSurvivalMutantPopulationDynamicATP-binding cassette transporterBiology[SDV.SA.SDS]Life Sciences [q-bio]/Agricultural sciences/Soil studymedicine.disease_causeApplied Microbiology and BiotechnologyMicrobiologyTranscriptome03 medical and health sciencesSoilListeria monocytogenesBacterial Proteins[ SDV.SA.AGRO ] Life Sciences [q-bio]/Agricultural sciences/AgronomymedicineEnvironmental MicrobiologyGeneSoil Microbiology030304 developmental biology2. Zero hunger0303 health sciencesMicrobial ViabilityEcology[ SDV ] Life Sciences [q-bio]030306 microbiologyGene Expression ProfilingWild typeGene Expression Regulation BacterialListeria MonocytogenesResponse regulator[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyTranscriptomeSoil microbiologyGene DeletionFood ScienceBiotechnologyTranscription Factors
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Investigation of the roles of AgrA and σB regulators in Listeria monocytogenes adaptation to roots and soil

2020

ABSTRACT Little is known about the regulatory mechanisms that ensure the survival of the food-borne bacterial pathogen Listeria monocytogenes in the telluric environment and on roots. Earlier studies have suggested a regulatory overlap between the Agr cell–cell communication system and the general stress response regulator σB. Here, we investigated the contribution of these two systems to root colonisation and survival in sterilised and biotic soil. The ability to colonise the roots of the grass Festuca arundinacea was significantly compromised in the double mutant (∆agrA∆sigB). In sterile soil at 25°C, a significant defect was observed in the double mutant, suggesting some synergy between …

MutantPopulationSoil survivalRoots colonizationSigma Factor[SDV.SA.SDS]Life Sciences [q-bio]/Agricultural sciences/Soil studymedicine.disease_causeMicrobiologyPlant RootsAgrA σBMicrobiology03 medical and health sciencesListeria monocytogenesBacterial Proteinstranscription regulatorsGeneticsmedicineeducationMolecular BiologyGenePathogenSoil Microbiology030304 developmental biology2. Zero hunger0303 health scienceseducation.field_of_studybiology030306 microbiology15. Life on landbiology.organism_classificationAdaptation PhysiologicalListeria monocytogenesColonisation[SDV.MP]Life Sciences [q-bio]/Microbiology and Parasitology13. Climate actionAdaptationFestuca arundinacea
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Listeria monocytogenes Differential Transcriptome Analysis Reveals Temperature-Dependent Agr Regulation and Suggests Overlaps with Other Regulons

2012

Listeria monocytogenes is a ubiquitous, opportunistic pathogenic organism. Environmental adaptation requires constant regulation of gene expression. Among transcriptional regulators, AgrA is part of an auto-induction system. Temperature is an environmental cue critical for in vivo adaptation. In order to investigate how temperature may affect AgrA-dependent transcription, we compared the transcriptomes of the parental strain L. monocytogenes EGD-e and its Delta agrA mutant at the saprophytic temperature of 25 degrees C and in vivo temperature of 37 degrees C. Variations of transcriptome were higher at 37 degrees C than at 25 degrees C. Results suggested that AgrA may be involved in the regu…

MicroarraysOperonMutantmedicine.disease_causeTranscriptomesTranscriptomeMolecular Cell BiologyTranscriptional regulationCluster AnalysisAmino AcidsCellular Stress ResponsesGeneticsRegulation of gene expression0303 health sciencesMultidisciplinaryQRTemperatureSalt ToleranceGenomicsPlanktonFunctional GenomicsBacterial Pathogens[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyMedicineResearch Articleagr-alisteria monocytogenes;pathogenic organism;transcriptome;temperature;agr-aScienceSigma FactorBiologyRegulonMicrobiologyMicrobial Ecology03 medical and health sciencesListeria monocytogenes[ SDV.SA.AGRO ] Life Sciences [q-bio]/Agricultural sciences/AgronomyGenome Analysis ToolsmedicinePathogenic organismGene SilencingBiology030304 developmental biologyGram Positive[ SDV ] Life Sciences [q-bio]030306 microbiologyGene Expression ProfilingComputational BiologyBiological TransportGene Expression Regulation BacterialListeria monocytogenesGene expression profilingRegulonBiofilmsTranscriptomelisteria monocytogènesGene DeletionTranscription Factors
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Métabolisme sucre-citrate chez Leuconostoc mesenteroides

2001

Sugar citrate cometabolism in Leuconostoc mesenteroides. Bacteria from the genus Leuconostocplay roles in the dairy industry. The most important functions of this bacteria are their ability to produce CO 2 and flavour compounds through lactose heterofermentation and citrate uti- lization. Although the biotechnological role of the citrate metabolism is very important and widely appreciated, little is known about the genetic properties of Leuconostoc spp. In our laboratory, we cloned the genes responsible for citrate metabolism ( clyR mae citCDEFGOPcluster), for D-lactate dehydrogenase (ldhD) and for phosphotransacetylase ( pta). In addition we have planned to con- struct new vectors and we h…

2. Zero hunger[SDV.SA]Life Sciences [q-bio]/Agricultural sciences[SDV.SA] Life Sciences [q-bio]/Agricultural sciences0303 health sciencesbiology030306 microbiologyNucleic acid sequencebiology.organism_classificationMicrobiologyMetabolic engineering03 medical and health sciencesPlasmidBiochemistryLeuconostoc mesenteroidesLeuconostocFermentationBacteriaComputingMilieux_MISCELLANEOUS030304 developmental biologyFood ScienceTransformation efficiency
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Changes in gene expression during adaptation of Listeria monocytogenes to the soil environment

2011

project SEST 009; International audience; Listeria monocytogenes is a ubiquitous opportunistic pathogen responsible for listeriosis. In order to study the processes underlying its ability to adapt to the soil environment, whole-genome arrays were used to analyse transcriptome modifications 15 minutes, 30 minutes and 18 h after inoculation of L. monocytogenes EGD-e in soil extracts. Growth was observed within the first day of incubation and large numbers were still detected in soil extract and soil microcosms one year after the start of the experiment. Major transcriptional reprofiling was observed. Nutrient acquisition mechanisms (phosphoenolpyruvate-dependent phosphotransferase systems and…

listeriaTime Factorslisteria monocytogenes[SDV]Life Sciences [q-bio]Gene ExpressionATP-binding cassette transporterSoil Chemistrymedicine.disease_causemicroorganisme du solPhosphotransferaseTranscriptomeSoilMolecular Cell BiologySoil MicrobiologyOligonucleotide Array Sequence Analysisbactérie2. Zero hungerRegulation of gene expression0303 health sciencesMultidisciplinaryReverse Transcriptase Polymerase Chain ReactionQRGene Expression Regulation DevelopmentalAdaptation PhysiologicalBacterial PathogensChemistry[SDE]Environmental SciencesMedicinelisteria monocytogenes ;relation sol microorganismeSoil microbiologyResearch ArticleScienceEnvironmentBiologyMicrobiologyMicrobial EcologyMicrobiology03 medical and health sciencesbiologie du solListeria monocytogenesmedicineEnvironmental ChemistrylistérioseBiologyEcosystem030304 developmental biologyrelation sol microorganismeGram Positiveécologie microbienne030306 microbiologyCatabolismGene Expression ProfilingGene Expression Regulation BacterialRegulonTranscriptome
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Investigation of root-associated biofilms of the human pathogenic bacterium Listeria monocytogenes

2012

EAMERSCT1EJ2; International audience; No abstract

Microscopy[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyRootContaminationGrowth[SDV.SA.SDS]Life Sciences [q-bio]/Agricultural sciences/Soil study[SDV.SA.SDS] Life Sciences [q-bio]/Agricultural sciences/Soil study[SDV.MP] Life Sciences [q-bio]/Microbiology and ParasitologyListeria monocytogenesComputingMilieux_MISCELLANEOUS
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Adaptation à l'environnement : métabolisme et communication bactérienne

2010

[SDV] Life Sciences [q-bio][SDE] Environmental SciencesBIOLOGIE DES POPULATIONShdr
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Le rôle du système agr chez Listeria monocytogènes

2009

National audience; La capacité des bactéries à développer un biofilm constitue une des principales difficultés quant à la maîtrise de la contamination : ces structures en augmentent les risques et rendent notamment les micro-organismes plus résistants aux désinfectants. Des études ont pu démontrer le rôle du système de communication agr dans la formation de biofilms de L. monocytogenes, agent pathogène particulièrement recherché en industrie agro-alimentaire.

[SDV] Life Sciences [q-bio][SDE] Environmental Sciences[SDV]Life Sciences [q-bio][SDE]Environmental Sciences
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Le système [i]agr[/i] de [i]Listeria monocytogenes[/i] et la croissance en biofilm : revisite des notions de communication, quorum sensing et auto-in…

2010

Communication orale, résumé; Parmi les mécanismes cellulaires qui participent à la mise en place des biofilms, l’échange de molécules de communication apparaît nécessaire chez de nombreux microorganismes. Listeria monocytogenes est une bactérie ubiquiste responsable de pathologies sévères chez des populations à risque (immunodéprimés, femmes enceintes, personnes âgées) en cas de consommation d’aliments contaminés. Nous avons récemment démontré que le système de communication agr est impliqué au cours de la croissance sessile de cette bactérie (Rieu et al., 2007). Par ailleurs, l’expression du système agr était hétérogène pendant la croissance en biofilm (Rieu et al., 2008) et localisée à sa…

[SDV] Life Sciences [q-bio][ SDV ] Life Sciences [q-bio]NOTIONS DE QUORUM SENSING[SDV]Life Sciences [q-bio]TYPE GFPCYTOMETRIE EN FLUX
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Differential expression of the agr locus of Listeria monocytogenes EGD-e

2007

International audience

[SDV] Life Sciences [q-bio][SDE] Environmental Sciences[SDV]Life Sciences [q-bio][SDE]Environmental SciencesComputingMilieux_MISCELLANEOUSdifferential expressionagr locus of Listeria monocytogenes EGD-esoil
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Investigation of rhizosphere as a niche for Listeria monocytogenes

2016

EAUBAGROSUPBIOME; International audience; No abstract

[SDV.MP]Life Sciences [q-bio]/Microbiology and Parasitology[SDV.SA.SDS]Life Sciences [q-bio]/Agricultural sciences/Soil study[SDV.SA.SDS] Life Sciences [q-bio]/Agricultural sciences/Soil study[SDV.MP] Life Sciences [q-bio]/Microbiology and ParasitologyComputingMilieux_MISCELLANEOUS
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Single cell analysis evidence Heterogeneous expression of the Agr communication system of Listeria monocytogenes

2012

http://prodinra.inra.fr/record/271694EAMERSCT3 EJ3; Communication, often referred as Quorum Sensing, is involved in the adaptation of most bacteria to their environment. In the genus Listeria, the agr communication system affects the biology of Listeria monocytogenes during saprophytic life (biofilm formation) and during infection. In the present study, we investigated in situ agr expression of six isolates of L. monocytogenes by combining gfp reporters, flow cytometry and fluorescent microscopy during plantonic growth and dynamic flow cell biofilm set ups. Unexpectedly, during growth in TSB homogenised liquid cultures incubated at 25°C, while auto-inducer concentration was uniform, statist…

[SDV] Life Sciences [q-bio][ SDV ] Life Sciences [q-bio]listeria monocytogenes[SDV]Life Sciences [q-bio]bacteriabiochemical phenomena metabolism and nutritionheterogeneitysingle cell
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σB and agrA regulation in Listeria monocytogenes: Effect on survival in soil/rhizosphere under biotic and abiotic conditions

2017

International audience; Abstract -250 words Backgrounds: Listeria monocytogenes is the agent of listeriosis, a life-threatening condition in at-risk people. Complex transmission routes between outdoor environments and the food chain result in foodstuff contamination. Sensing of environmental changes can trigger regulation of gene expression, allowing bacteria to adapt their physiology and survive. The Agr cell-cell communication system transcription regulator AgrA is triggered during several environmental conditions including soil, an important reservoir of L. monocytogenes. The RNA polymerase σB factor aids survival in several stress conditions and may be required for L. monocytogenes surv…

[SDV] Life Sciences [q-bio][SDV.SA.AGRO] Life Sciences [q-bio]/Agricultural sciences/Agronomy[ SDV ] Life Sciences [q-bio][ SDV.SA.AGRO ] Life Sciences [q-bio]/Agricultural sciences/Agronomy[SDV]Life Sciences [q-bio][SDV.SA.AGRO]Life Sciences [q-bio]/Agricultural sciences/Agronomy
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Le système Agr de Listeria monocytogenes : revisite des notions de Quorum Sensing et auto-induction par cytométrie en flux

2011

National audience

[SDV] Life Sciences [q-bio][SDE] Environmental SciencesNOTIONS DE QUORUM SENSING[SDV]Life Sciences [q-bio][SDE]Environmental SciencesTYPE GFPCYTOMETRIE EN FLUXComputingMilieux_MISCELLANEOUS
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Listeria monocytogenes agr system: Quorum sensing, or maybe not?

2010

International audience

[SDV] Life Sciences [q-bio][SDE] Environmental SciencesQuorum sensing[SDV]Life Sciences [q-bio][SDE]Environmental Sciencesagr systemComputingMilieux_MISCELLANEOUSListeria monocytogenesoil
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